BLASTX nr result

ID: Coptis24_contig00027631 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00027631
         (307 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002530574.1| something about silencing protein sas10, put...    77   1e-12
ref|XP_003528493.1| PREDICTED: uncharacterized protein C3B8.09-l...    77   2e-12
ref|XP_003520178.1| PREDICTED: uncharacterized protein LOC100812...    77   2e-12
emb|CBI24668.3| unnamed protein product [Vitis vinifera]               75   7e-12
ref|XP_002273791.1| PREDICTED: uncharacterized protein C3B8.09-l...    75   7e-12

>ref|XP_002530574.1| something about silencing protein sas10, putative [Ricinus
           communis] gi|223529873|gb|EEF31804.1| something about
           silencing protein sas10, putative [Ricinus communis]
          Length = 639

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 46/115 (40%), Positives = 61/115 (53%), Gaps = 14/115 (12%)
 Frame = +3

Query: 3   GNANLSSGCSSSMHSTXXXXXXXXXXXXXXXXSGDDDLPKRDDIGERRRKHELRVLANAG 182
           GN  LS+G +S + S+                SGDDDLPKRDDIGERRRKHE+RVLA AG
Sbjct: 440 GNHGLSNGQASLLGSSKLSQLVSAKANKPKAISGDDDLPKRDDIGERRRKHEIRVLAGAG 499

Query: 183 VKSKXXXXXXXXXXXASE--------------NELYEQVKKQKISKLSAKAELYS 305
           VKS+             E              +E Y+++K+++ +K  AKAE Y+
Sbjct: 500 VKSEDDAIHEPGTLETDEPSDMEEDGDTGGSGDEFYKEIKQKRDAKFVAKAEKYA 554


>ref|XP_003528493.1| PREDICTED: uncharacterized protein C3B8.09-like [Glycine max]
          Length = 668

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 42/84 (50%), Positives = 52/84 (61%), Gaps = 15/84 (17%)
 Frame = +3

Query: 99  SGDDDLPKRDDIGERRRKHELRVLANAGVKSKXXXXXXXXXXXA---------------S 233
           SGDDDLPKRDDIGERRRKHELRVLA AG++++                           S
Sbjct: 498 SGDDDLPKRDDIGERRRKHELRVLAGAGIRTEDDDGDDQMTDLGPNEVTDEEDDGGSGDS 557

Query: 234 ENELYEQVKKQKISKLSAKAELYS 305
           ENE Y+QV++ + +KL+AKAE YS
Sbjct: 558 ENEFYKQVEQLRAAKLAAKAETYS 581


>ref|XP_003520178.1| PREDICTED: uncharacterized protein LOC100812322 [Glycine max]
          Length = 673

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 42/83 (50%), Positives = 52/83 (62%), Gaps = 14/83 (16%)
 Frame = +3

Query: 99  SGDDDLPKRDDIGERRRKHELRVLANAGVKSKXXXXXXXXXXXA--------------SE 236
           SGDDDLPKRDDIGERRRKHELRVLA AG++++                          SE
Sbjct: 504 SGDDDLPKRDDIGERRRKHELRVLAGAGIRTEDDDDDQMADLGPNEVTDEEEDGGSGDSE 563

Query: 237 NELYEQVKKQKISKLSAKAELYS 305
           NE Y+QV++ + +KL+AKAE YS
Sbjct: 564 NEFYKQVEQLRAAKLAAKAETYS 586


>emb|CBI24668.3| unnamed protein product [Vitis vinifera]
          Length = 719

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 45/112 (40%), Positives = 59/112 (52%), Gaps = 15/112 (13%)
 Frame = +3

Query: 15  LSSGCSSSMHSTXXXXXXXXXXXXXXXXSGDDDLPKRDDIGERRRKHELRVLANAGVK-- 188
           L++G + S+ S+                SGDDDLPKRDDIGERRRKHELRVLA AG++  
Sbjct: 518 LTNGQAGSLPSSKLSHLVSANMKKPKIVSGDDDLPKRDDIGERRRKHELRVLAGAGIEPM 577

Query: 189 -------------SKXXXXXXXXXXXASENELYEQVKKQKISKLSAKAELYS 305
                                      SE+E Y+QVK+ + +KL+AK E+YS
Sbjct: 578 DDDEDGICTVDVDKDANMDDNDSGTEESEDEFYKQVKQLRAAKLAAKEEIYS 629


>ref|XP_002273791.1| PREDICTED: uncharacterized protein C3B8.09-like [Vitis vinifera]
          Length = 669

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 45/112 (40%), Positives = 59/112 (52%), Gaps = 15/112 (13%)
 Frame = +3

Query: 15  LSSGCSSSMHSTXXXXXXXXXXXXXXXXSGDDDLPKRDDIGERRRKHELRVLANAGVK-- 188
           L++G + S+ S+                SGDDDLPKRDDIGERRRKHELRVLA AG++  
Sbjct: 468 LTNGQAGSLPSSKLSHLVSANMKKPKIVSGDDDLPKRDDIGERRRKHELRVLAGAGIEPM 527

Query: 189 -------------SKXXXXXXXXXXXASENELYEQVKKQKISKLSAKAELYS 305
                                      SE+E Y+QVK+ + +KL+AK E+YS
Sbjct: 528 DDDEDGICTVDVDKDANMDDNDSGTEESEDEFYKQVKQLRAAKLAAKEEIYS 579


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