BLASTX nr result
ID: Coptis24_contig00027497
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00027497 (281 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002325490.1| predicted protein [Populus trichocarpa] gi|2... 50 2e-06 ref|XP_003606390.1| DEAD-box ATP-dependent RNA helicase [Medicag... 49 4e-06 >ref|XP_002325490.1| predicted protein [Populus trichocarpa] gi|222862365|gb|EEE99871.1| predicted protein [Populus trichocarpa] Length = 594 Score = 50.1 bits (118), Expect(2) = 2e-06 Identities = 22/31 (70%), Positives = 27/31 (87%) Frame = +3 Query: 186 GRVKEDFMIKKLHLGHLATSFGLKKQPSLVG 278 G +K FM+KKLHLGH++ SFGLK+QPSLVG Sbjct: 533 GDLKRIFMVKKLHLGHVSRSFGLKQQPSLVG 563 Score = 26.2 bits (56), Expect(2) = 2e-06 Identities = 14/23 (60%), Positives = 16/23 (69%) Frame = +1 Query: 136 LYKTPF*SCV*AYIAHWGELKRI 204 L +T F S V AY AH G+LKRI Sbjct: 516 LAQTAFCSWVRAYTAHRGDLKRI 538 >ref|XP_003606390.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula] gi|355507445|gb|AES88587.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula] Length = 613 Score = 48.9 bits (115), Expect(2) = 4e-06 Identities = 22/31 (70%), Positives = 26/31 (83%) Frame = +3 Query: 186 GRVKEDFMIKKLHLGHLATSFGLKKQPSLVG 278 G +K FM+KKLHLGH+A SFGLK+ PSLVG Sbjct: 553 GELKRIFMVKKLHLGHVAKSFGLKQIPSLVG 583 Score = 26.6 bits (57), Expect(2) = 4e-06 Identities = 15/23 (65%), Positives = 15/23 (65%) Frame = +1 Query: 136 LYKTPF*SCV*AYIAHWGELKRI 204 L K F S V AY AH GELKRI Sbjct: 536 LAKRAFCSWVRAYTAHRGELKRI 558