BLASTX nr result

ID: Coptis24_contig00027480 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00027480
         (339 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAH66430.1| OSIGBa0096P03.4 [Oryza sativa Indica Group]            59   3e-07
emb|CAE05535.2| OSJNBa0053B21.9 [Oryza sativa Japonica Group]          59   4e-07
ref|XP_002865811.1| hypothetical protein ARALYDRAFT_918083 [Arab...    59   4e-07
ref|XP_002446305.1| hypothetical protein SORBIDRAFT_06g013910 [S...    59   4e-07
gb|EAZ30529.1| hypothetical protein OsJ_14578 [Oryza sativa Japo...    59   4e-07

>emb|CAH66430.1| OSIGBa0096P03.4 [Oryza sativa Indica Group]
          Length = 729

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 38/91 (41%), Positives = 56/91 (61%), Gaps = 4/91 (4%)
 Frame = -1

Query: 339 QYEIVEVVSDIP---GCTIVVGLVRVEGFEAVFQRQVQEK-SQQFSQKELLRFSHRVLAS 172
           +YEIVEV+ D     G T V+ L++V GF+AVF R +  K +++  ++EL RFSHRV + 
Sbjct: 628 KYEIVEVIDDFTDEQGLT-VIPLLKVAGFKAVFHRHMDPKEARRIPKEELFRFSHRVPSR 686

Query: 171 KSKGEEMDGVPSGLWMLESSAVHPELL*VIS 79
              GEE +  P G   L+ +A   +LL VI+
Sbjct: 687 LLTGEEGNNAPKGCHELDPAATPVDLLKVIT 717


>emb|CAE05535.2| OSJNBa0053B21.9 [Oryza sativa Japonica Group]
          Length = 729

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 37/91 (40%), Positives = 56/91 (61%), Gaps = 4/91 (4%)
 Frame = -1

Query: 339 QYEIVEVVSDIP---GCTIVVGLVRVEGFEAVFQRQVQEK-SQQFSQKELLRFSHRVLAS 172
           +YEIVE++ D     G T V+ L++V GF+AVF R +  K +++  ++EL RFSHRV + 
Sbjct: 628 KYEIVEIIDDFTDEQGLT-VIPLLKVAGFKAVFHRHMDPKEARRIPKEELFRFSHRVPSR 686

Query: 171 KSKGEEMDGVPSGLWMLESSAVHPELL*VIS 79
              GEE +  P G   L+ +A   +LL VI+
Sbjct: 687 LLTGEEGNNAPKGCHELDPAATPVDLLKVIT 717


>ref|XP_002865811.1| hypothetical protein ARALYDRAFT_918083 [Arabidopsis lyrata subsp.
           lyrata] gi|297311646|gb|EFH42070.1| hypothetical protein
           ARALYDRAFT_918083 [Arabidopsis lyrata subsp. lyrata]
          Length = 336

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 35/91 (38%), Positives = 55/91 (60%), Gaps = 2/91 (2%)
 Frame = -1

Query: 339 QYEIVEVVSDIP--GCTIVVGLVRVEGFEAVFQRQVQEKSQQFSQKELLRFSHRVLASKS 166
           +YE+VEV+ D        VV LV++ GF+ +F+R   +++  + +KEL RFSH+V     
Sbjct: 225 KYEMVEVLQDFDEENGVKVVPLVKLSGFKTLFRRHPSQRT--YPRKELFRFSHQVAYQLL 282

Query: 165 KGEEMDGVPSGLWMLESSAVHPELL*VISWE 73
            GEE +  P G   L+ +A+ PELL V++ E
Sbjct: 283 TGEEGENAPDGCLELDPAALTPELLKVLTEE 313


>ref|XP_002446305.1| hypothetical protein SORBIDRAFT_06g013910 [Sorghum bicolor]
           gi|241937488|gb|EES10633.1| hypothetical protein
           SORBIDRAFT_06g013910 [Sorghum bicolor]
          Length = 735

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 38/91 (41%), Positives = 55/91 (60%), Gaps = 4/91 (4%)
 Frame = -1

Query: 339 QYEIVEVVSDIP---GCTIVVGLVRVEGFEAVFQRQVQEKS-QQFSQKELLRFSHRVLAS 172
           +YEIVEV+ D     G T V+ L++V GF+AVF R +  K  ++  ++EL RFSHRV + 
Sbjct: 634 KYEIVEVIDDFTEEQGLT-VIPLLKVAGFKAVFHRHMDPKEVRRIPKEELFRFSHRVPSR 692

Query: 171 KSKGEEMDGVPSGLWMLESSAVHPELL*VIS 79
              GEE +  P G   L+ +A   +LL VI+
Sbjct: 693 LLTGEEGNNAPKGCHELDPAATPVDLLKVIT 723


>gb|EAZ30529.1| hypothetical protein OsJ_14578 [Oryza sativa Japonica Group]
          Length = 1255

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 37/91 (40%), Positives = 56/91 (61%), Gaps = 4/91 (4%)
 Frame = -1

Query: 339  QYEIVEVVSDIP---GCTIVVGLVRVEGFEAVFQRQVQEK-SQQFSQKELLRFSHRVLAS 172
            +YEIVE++ D     G T V+ L++V GF+AVF R +  K +++  ++EL RFSHRV + 
Sbjct: 1154 KYEIVEIIDDFTDEQGLT-VIPLLKVAGFKAVFHRHMDPKEARRIPKEELFRFSHRVPSR 1212

Query: 171  KSKGEEMDGVPSGLWMLESSAVHPELL*VIS 79
               GEE +  P G   L+ +A   +LL VI+
Sbjct: 1213 LLTGEEGNNAPKGCHELDPAATPVDLLKVIT 1243


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