BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00027365
         (575 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273309.1| PREDICTED: F-box protein SKIP24 [Vitis vinif...   172   4e-41
emb|CAN62570.1| hypothetical protein VITISV_029090 [Vitis vinifera]   171   6e-41
ref|XP_002319735.1| f-box family protein [Populus trichocarpa] g...   167   1e-39
ref|XP_002530951.1| conserved hypothetical protein [Ricinus comm...   160   1e-37
gb|AFK35084.1| unknown [Lotus japonicus]                              160   2e-37

>ref|XP_002273309.1| PREDICTED: F-box protein SKIP24 [Vitis vinifera]
           gi|296085868|emb|CBI31192.3| unnamed protein product
           [Vitis vinifera]
          Length = 256

 Score =  172 bits (436), Expect = 4e-41
 Identities = 88/183 (48%), Positives = 122/183 (66%)
 Frame = -3

Query: 549 LPDEIWSEIITLGINNTKLTYKDLCCISISSKRLNKLSNQDTLWSILLTLDFPTXXXXXX 370
           LPDE+W +I+ +GI ++ LTYKDLCC+SIS +RL++LSN   LWS LL+ DFP       
Sbjct: 4   LPDEMWRQILEIGIRSSNLTYKDLCCVSISCRRLHRLSNDAVLWSFLLSSDFP------H 57

Query: 369 XXXXXXXXXXPTLQLPIKSVYXXXXXXXXXXKIAAHRRAVYRIESQINVHTAKLKEIKVQ 190
                      +  L  K +Y          K AAHRRAV R+ESQI  H   L+EI+++
Sbjct: 58  TEASVSNGTVSSSSLSPKLMYRIKFDRERARKAAAHRRAVLRLESQIAGHLRNLQEIQMK 117

Query: 189 LMKENEKLKMGLSELGNLERVRSASVAMNVWQPEIVRGKQKRVVEQCVVPVESRVKGVEM 10
           L +E EK+K  ++EL NL +VR ASVA+NVWQPE++RG QK++V QCVVPV++R+  +EM
Sbjct: 118 LTEETEKMKAAVTELPNLRKVRQASVALNVWQPEVIRGWQKQMVGQCVVPVDARINALEM 177

Query: 9   EIR 1
           E++
Sbjct: 178 ELK 180


>emb|CAN62570.1| hypothetical protein VITISV_029090 [Vitis vinifera]
          Length = 256

 Score =  171 bits (434), Expect = 6e-41
 Identities = 88/182 (48%), Positives = 121/182 (66%)
 Frame = -3

Query: 549 LPDEIWSEIITLGINNTKLTYKDLCCISISSKRLNKLSNQDTLWSILLTLDFPTXXXXXX 370
           LPDE+W +I+ +GI ++ LTYKDLCC+SIS +RL++LSN   LWS LL+ DFP       
Sbjct: 4   LPDEMWRQILEIGIRSSNLTYKDLCCVSISCRRLHRLSNDAVLWSFLLSSDFP------H 57

Query: 369 XXXXXXXXXXPTLQLPIKSVYXXXXXXXXXXKIAAHRRAVYRIESQINVHTAKLKEIKVQ 190
                      +  L  K +Y          K AAHRRAV R+ESQI  H   L+EI+++
Sbjct: 58  TEASVSNGTVSSSSLSPKLMYRIKFDRERARKAAAHRRAVLRLESQIAGHLRNLQEIQMK 117

Query: 189 LMKENEKLKMGLSELGNLERVRSASVAMNVWQPEIVRGKQKRVVEQCVVPVESRVKGVEM 10
           L +E EK+K  ++EL NL +VR ASVA+NVWQPE++RG QK++V QCVVPV++R+  +EM
Sbjct: 118 LTEETEKMKAAVTELPNLRKVRQASVALNVWQPEVIRGWQKQMVGQCVVPVDARINALEM 177

Query: 9   EI 4
           E+
Sbjct: 178 EL 179


>ref|XP_002319735.1| f-box family protein [Populus trichocarpa]
           gi|222858111|gb|EEE95658.1| f-box family protein
           [Populus trichocarpa]
          Length = 273

 Score =  167 bits (423), Expect = 1e-39
 Identities = 85/183 (46%), Positives = 121/183 (66%)
 Frame = -3

Query: 549 LPDEIWSEIITLGINNTKLTYKDLCCISISSKRLNKLSNQDTLWSILLTLDFPTXXXXXX 370
           +PDE+W +I+ +GI N+KL YKDLCCISIS +RL++LS +++LW +LL+ DFP+      
Sbjct: 4   VPDELWRQILEMGIQNSKLNYKDLCCISISCRRLHRLSAENSLWLLLLSSDFPSPNQQNP 63

Query: 369 XXXXXXXXXXPTLQLPIKSVYXXXXXXXXXXKIAAHRRAVYRIESQINVHTAKLKEIKVQ 190
                      +     KS Y          K+AAHRRAV R ES++     K++EI+  
Sbjct: 64  NPNN-------STSASAKSTYKIKFEREKSRKVAAHRRAVLRKESEVLEFERKIREIENG 116

Query: 189 LMKENEKLKMGLSELGNLERVRSASVAMNVWQPEIVRGKQKRVVEQCVVPVESRVKGVEM 10
           L +E EK++   +EL NL +VR ASVA+NVWQPE++RG+QK++VEQ  VPVESRV  +EM
Sbjct: 117 LRQETEKMRATAAELSNLHKVRQASVALNVWQPEVIRGRQKQIVEQSAVPVESRVHSLEM 176

Query: 9   EIR 1
           E++
Sbjct: 177 ELK 179


>ref|XP_002530951.1| conserved hypothetical protein [Ricinus communis]
           gi|223529466|gb|EEF31423.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 261

 Score =  160 bits (406), Expect = 1e-37
 Identities = 83/185 (44%), Positives = 118/185 (63%)
 Frame = -3

Query: 555 TALPDEIWSEIITLGINNTKLTYKDLCCISISSKRLNKLSNQDTLWSILLTLDFPTXXXX 376
           + LPDE+W +II  GI ++  +YKDLCCISI  +RL++LSN+ + WS  L+ DFP     
Sbjct: 2   SGLPDELWRQIIEFGIRSSNFSYKDLCCISICCRRLHRLSNEHSFWSHFLSSDFPPSPQQ 61

Query: 375 XXXXXXXXXXXXPTLQLPIKSVYXXXXXXXXXXKIAAHRRAVYRIESQINVHTAKLKEIK 196
                        +     KS Y          K+AAHRRAV R ES+I     K+++I+
Sbjct: 62  QQHQQNPNPNNYTSTA---KSTYKIRFEKEREKKVAAHRRAVLRKESEIMERERKIRDIE 118

Query: 195 VQLMKENEKLKMGLSELGNLERVRSASVAMNVWQPEIVRGKQKRVVEQCVVPVESRVKGV 16
            +L +E++K++   +EL NL +VR ASVA+NVWQPE+VRG+QK++VEQCVV  ESRV  +
Sbjct: 119 YRLCQESDKMRDTANELSNLHKVRQASVALNVWQPEVVRGRQKQLVEQCVVSFESRVHSL 178

Query: 15  EMEIR 1
           EME++
Sbjct: 179 EMELK 183


>gb|AFK35084.1| unknown [Lotus japonicus]
          Length = 257

 Score =  160 bits (404), Expect = 2e-37
 Identities = 80/185 (43%), Positives = 119/185 (64%)
 Frame = -3

Query: 555 TALPDEIWSEIITLGINNTKLTYKDLCCISISSKRLNKLSNQDTLWSILLTLDFPTXXXX 376
           ++LP+E+W  I+ +G+ ++  TYKDLCCISIS +R ++LS+ D+LW+ LL+ DFP+    
Sbjct: 14  SSLPEELWRRILEIGVESSGFTYKDLCCISISCRRFHRLSSDDSLWNPLLSSDFPSLTPP 73

Query: 375 XXXXXXXXXXXXPTLQLPIKSVYXXXXXXXXXXKIAAHRRAVYRIESQINVHTAKLKEIK 196
                        +     KS+Y          +IAAH+R V R ESQ+  H+ KL+ I+
Sbjct: 74  SSS----------STSPSAKSLYKLRFERDKERRIAAHKRVVLRKESQVAEHSRKLRNIQ 123

Query: 195 VQLMKENEKLKMGLSELGNLERVRSASVAMNVWQPEIVRGKQKRVVEQCVVPVESRVKGV 16
            ++ +E+ K      EL +L R+R ASVA+NVWQPE+VRG+QK++VEQC VP ESR+  +
Sbjct: 124 TRVAEESIKAGETAVELSSLRRIRQASVALNVWQPEVVRGRQKQMVEQCAVPAESRIHAL 183

Query: 15  EMEIR 1
           EME+R
Sbjct: 184 EMELR 188