BLASTX nr result
ID: Coptis24_contig00027356
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00027356 (466 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002329042.1| predicted protein [Populus trichocarpa] gi|2... 108 3e-31 ref|XP_002534679.1| conserved hypothetical protein [Ricinus comm... 97 9e-19 ref|XP_002514475.1| conserved hypothetical protein [Ricinus comm... 96 3e-18 gb|AAF79348.1|AC007887_7 F15O4.13 [Arabidopsis thaliana] 60 1e-11 ref|XP_002528720.1| conserved hypothetical protein [Ricinus comm... 74 2e-11 >ref|XP_002329042.1| predicted protein [Populus trichocarpa] gi|222839713|gb|EEE78036.1| predicted protein [Populus trichocarpa] Length = 442 Score = 108 bits (269), Expect(2) = 3e-31 Identities = 51/87 (58%), Positives = 67/87 (77%), Gaps = 3/87 (3%) Frame = +3 Query: 9 VEEIVEFKEIPDHKQVPLMVTRFKGRASAWYQQVKSTRSHQGKQKIESWDKLKKHMRAAF 188 V+E++EFK++P+ ++V L+ TR +GRA AW+QQVK TR+ QGK KI WDK+KK+MR+AF Sbjct: 110 VDEVLEFKQVPEDRRVALVATRLRGRAGAWWQQVKKTRTLQGKGKITCWDKMKKNMRSAF 169 Query: 189 LPYHYKRYLCNR---LHQGFRSTDDYT 260 LPY+Y R L R L QG RS DDYT Sbjct: 170 LPYNYTRTLYQRLQNLRQGNRSVDDYT 196 Score = 52.0 bits (123), Expect(2) = 3e-31 Identities = 28/56 (50%), Positives = 35/56 (62%) Frame = +2 Query: 269 QLVVHADLMEGDEQLVHHYIGGLQQNFKDTLNLFDPWTVPKAHQRALCLENQLTRR 436 QLV + E +E V YIG L+ F+D LN+FD +V AHQRA+ LE QL RR Sbjct: 201 QLVSRDAIAEDEESRVVRYIGRLRIQFQDVLNMFDVLSVSDAHQRAVQLEKQLVRR 256 >ref|XP_002534679.1| conserved hypothetical protein [Ricinus communis] gi|223524777|gb|EEF27704.1| conserved hypothetical protein [Ricinus communis] Length = 272 Score = 97.1 bits (240), Expect(2) = 9e-19 Identities = 45/88 (51%), Positives = 66/88 (75%), Gaps = 3/88 (3%) Frame = +3 Query: 6 LVEEIVEFKEIPDHKQVPLMVTRFKGRASAWYQQVKSTRSHQGKQKIESWDKLKKHMRAA 185 +VEEI++FK +P+ K+VPL+ TR + RA+AW+QQ K TR+ GK KI + +K++KHM++ Sbjct: 77 MVEEILDFKWVPEDKRVPLVATRLRDRATAWWQQSKLTRTRLGKDKIATSEKMRKHMQSI 136 Query: 186 FLPYHYKRYLCNR---LHQGFRSTDDYT 260 FLPY+++R + R L QG RS DDYT Sbjct: 137 FLPYNFQRLMYQRLQNLRQGVRSVDDYT 164 Score = 21.2 bits (43), Expect(2) = 9e-19 Identities = 9/22 (40%), Positives = 13/22 (59%) Frame = +2 Query: 269 QLVVHADLMEGDEQLVHHYIGG 334 QL+ D+ E +QLV + GG Sbjct: 169 QLIARNDIQEAADQLVASWGGG 190 >ref|XP_002514475.1| conserved hypothetical protein [Ricinus communis] gi|223546374|gb|EEF47875.1| conserved hypothetical protein [Ricinus communis] Length = 173 Score = 95.9 bits (237), Expect = 3e-18 Identities = 46/88 (52%), Positives = 65/88 (73%), Gaps = 3/88 (3%) Frame = +3 Query: 6 LVEEIVEFKEIPDHKQVPLMVTRFKGRASAWYQQVKSTRSHQGKQKIESWDKLKKHMRAA 185 +VEEI++FK + + K+VPL+ TR +GRA+AW+QQ K TR+ K KI + +K+KKHMR+A Sbjct: 74 MVEEILDFKGVLEDKRVPLVATRLRGRATAWWQQSKLTRARLEKDKIATLEKMKKHMRSA 133 Query: 186 FLPYHYKRYLCNR---LHQGFRSTDDYT 260 FLPY+++R + R L QG R DDYT Sbjct: 134 FLPYNFQRLMYQRLQNLRQGMRLMDDYT 161 >gb|AAF79348.1|AC007887_7 F15O4.13 [Arabidopsis thaliana] Length = 1887 Score = 60.5 bits (145), Expect(2) = 1e-11 Identities = 31/88 (35%), Positives = 49/88 (55%), Gaps = 3/88 (3%) Frame = +3 Query: 9 VEEIVEFKEIPDHKQVPLMVTRFKGRASAWYQQVKSTRSHQGKQKIESWDKLKKHMRAAF 188 +E + ++ + +V + T F+ A +W+ Q+ +TR G IESW ++K MR F Sbjct: 460 IELVFNCQQYTEESKVKVAPTEFQNYALSWWDQLVTTRRRAGDYPIESWTQMKTIMRKRF 519 Query: 189 LPYHYKRYLCNRLH---QGFRSTDDYTK 263 +P HY R L NRL QG +S ++Y K Sbjct: 520 VPSHYYRELHNRLRNLVQGNKSVEEYYK 547 Score = 33.5 bits (75), Expect(2) = 1e-11 Identities = 16/59 (27%), Positives = 33/59 (55%) Frame = +2 Query: 260 KVNQLVVHADLMEGDEQLVHHYIGGLQQNFKDTLNLFDPWTVPKAHQRALCLENQLTRR 436 ++ L++ AD+ E +E ++ ++GGL ++ D L + + + +A+ E QL RR Sbjct: 548 EMETLMLRADIQEDNEAIMSRFMGGLNRDIIDRLEVQHYVELEELLHKAIMFEKQLKRR 606 >ref|XP_002528720.1| conserved hypothetical protein [Ricinus communis] gi|223531814|gb|EEF33632.1| conserved hypothetical protein [Ricinus communis] Length = 124 Score = 73.6 bits (179), Expect = 2e-11 Identities = 33/56 (58%), Positives = 43/56 (76%) Frame = +3 Query: 9 VEEIVEFKEIPDHKQVPLMVTRFKGRASAWYQQVKSTRSHQGKQKIESWDKLKKHM 176 VEEI++FK + + K VPL+ TR KGRA AW+QQ K TR+ GK KI +W+K+KKHM Sbjct: 69 VEEILDFKGVQEDKCVPLVATRLKGRAIAWWQQSKLTRTRLGKDKIATWEKMKKHM 124