BLASTX nr result

ID: Coptis24_contig00027353 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00027353
         (541 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI34668.3| unnamed protein product [Vitis vinifera]               72   4e-11
ref|XP_002274169.1| PREDICTED: uncharacterized protein LOC100256...    72   4e-11
emb|CAN65659.1| hypothetical protein VITISV_000953 [Vitis vinifera]    72   4e-11
ref|XP_002276223.1| PREDICTED: kinesin-4-like [Vitis vinifera]         68   8e-10
ref|XP_002509807.1| kinesin heavy chain, putative [Ricinus commu...    67   1e-09

>emb|CBI34668.3| unnamed protein product [Vitis vinifera]
          Length = 1071

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 33/56 (58%), Positives = 46/56 (82%), Gaps = 1/56 (1%)
 Frame = -1

Query: 175 GSVVG-AKQRAELVEWLNDIVPNLSLPVEASDEEVRSCLLDGSVFCSILSRLNPSS 11
           G++ G   QR +LVEWLN I+P LSLP+EAS+E++R+CL+DG+V C IL+RL+P S
Sbjct: 35  GTIEGNLSQRTQLVEWLNGILPYLSLPLEASEEDLRACLIDGTVLCGILNRLSPGS 90


>ref|XP_002274169.1| PREDICTED: uncharacterized protein LOC100256435 [Vitis vinifera]
          Length = 1101

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 33/56 (58%), Positives = 46/56 (82%), Gaps = 1/56 (1%)
 Frame = -1

Query: 175 GSVVG-AKQRAELVEWLNDIVPNLSLPVEASDEEVRSCLLDGSVFCSILSRLNPSS 11
           G++ G   QR +LVEWLN I+P LSLP+EAS+E++R+CL+DG+V C IL+RL+P S
Sbjct: 35  GTIEGNLSQRTQLVEWLNGILPYLSLPLEASEEDLRACLIDGTVLCGILNRLSPGS 90


>emb|CAN65659.1| hypothetical protein VITISV_000953 [Vitis vinifera]
          Length = 1742

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 33/56 (58%), Positives = 46/56 (82%), Gaps = 1/56 (1%)
 Frame = -1

Query: 175 GSVVG-AKQRAELVEWLNDIVPNLSLPVEASDEEVRSCLLDGSVFCSILSRLNPSS 11
           G++ G   QR +LVEWLN I+P LSLP+EAS+E++R+CL+DG+V C IL+RL+P S
Sbjct: 24  GTIEGNXSQRTQLVEWLNGILPYLSLPLEASEEDLRACLIDGTVLCGILNRLSPGS 79


>ref|XP_002276223.1| PREDICTED: kinesin-4-like [Vitis vinifera]
          Length = 1088

 Score = 68.2 bits (165), Expect = 8e-10
 Identities = 34/71 (47%), Positives = 48/71 (67%), Gaps = 3/71 (4%)
 Frame = -1

Query: 214 FSISENGQPPSPVGSVVGA---KQRAELVEWLNDIVPNLSLPVEASDEEVRSCLLDGSVF 44
           F +S NG    P+ +       K+RA + EWLN ++PNL+LPV+AS EE+R+CL+DG+V 
Sbjct: 18  FRVSGNGDVFEPMATHNADDKDKKRAIVAEWLNSMLPNLNLPVKASVEELRACLIDGAVL 77

Query: 43  CSILSRLNPSS 11
           C  L+RL P S
Sbjct: 78  CRFLNRLRPGS 88


>ref|XP_002509807.1| kinesin heavy chain, putative [Ricinus communis]
           gi|223549706|gb|EEF51194.1| kinesin heavy chain,
           putative [Ricinus communis]
          Length = 1069

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 31/55 (56%), Positives = 45/55 (81%)
 Frame = -1

Query: 181 PVGSVVGAKQRAELVEWLNDIVPNLSLPVEASDEEVRSCLLDGSVFCSILSRLNP 17
           P G + G  Q   LVEWLN ++P+L+LP+EAS+EE+R+CL+DG+V CSIL++L+P
Sbjct: 32  PEGILDGNLQ--SLVEWLNHMIPHLNLPLEASEEELRACLIDGTVLCSILNKLSP 84


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