BLASTX nr result

ID: Coptis24_contig00027332 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00027332
         (223 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002314703.1| predicted protein [Populus trichocarpa] gi|2...   146   2e-33
ref|XP_002516782.1| Amine oxidase [copper-containing] precursor,...   142   2e-32
ref|XP_002312527.1| predicted protein [Populus trichocarpa] gi|2...   142   2e-32
ref|XP_002278327.1| PREDICTED: primary amine oxidase [Vitis vini...   140   8e-32
emb|CAN68223.1| hypothetical protein VITISV_040530 [Vitis vinifera]   140   8e-32

>ref|XP_002314703.1| predicted protein [Populus trichocarpa] gi|222863743|gb|EEF00874.1|
           predicted protein [Populus trichocarpa]
          Length = 673

 Score =  146 bits (369), Expect = 2e-33
 Identities = 66/74 (89%), Positives = 68/74 (91%)
 Frame = +2

Query: 2   NKSEKWVGGEYSDQSRGDDTLATWSARNRAIENKDIVLWYTLGFHHVPYQEDFPVMPTLS 181
           NKSEKW GG Y+DQSRGDDTLA WS RNR IENKDIVLWYTLGFHHVPYQEDFPVMPT+S
Sbjct: 579 NKSEKWAGGLYADQSRGDDTLARWSLRNRGIENKDIVLWYTLGFHHVPYQEDFPVMPTIS 638

Query: 182 SGFELRPANFFNSN 223
           SGFELRPANFF SN
Sbjct: 639 SGFELRPANFFESN 652


>ref|XP_002516782.1| Amine oxidase [copper-containing] precursor, putative [Ricinus
           communis] gi|223543870|gb|EEF45396.1| Amine oxidase
           [copper-containing] precursor, putative [Ricinus
           communis]
          Length = 689

 Score =  142 bits (359), Expect = 2e-32
 Identities = 65/74 (87%), Positives = 67/74 (90%)
 Frame = +2

Query: 2   NKSEKWVGGEYSDQSRGDDTLATWSARNRAIENKDIVLWYTLGFHHVPYQEDFPVMPTLS 181
           NKSEKW  G Y DQSRGDDTLATW+ R+R IENKDIVLWYTLGFHHVPYQEDFPVMPTLS
Sbjct: 590 NKSEKWASGLYVDQSRGDDTLATWTLRDRKIENKDIVLWYTLGFHHVPYQEDFPVMPTLS 649

Query: 182 SGFELRPANFFNSN 223
           SGFELRPANFF SN
Sbjct: 650 SGFELRPANFFESN 663


>ref|XP_002312527.1| predicted protein [Populus trichocarpa] gi|222852347|gb|EEE89894.1|
           predicted protein [Populus trichocarpa]
          Length = 668

 Score =  142 bits (359), Expect = 2e-32
 Identities = 66/74 (89%), Positives = 66/74 (89%)
 Frame = +2

Query: 2   NKSEKWVGGEYSDQSRGDDTLATWSARNRAIENKDIVLWYTLGFHHVPYQEDFPVMPTLS 181
           NKSEKW GG Y DQSRGDDTLA WS RNR IENKDIVLWYTLGFHHVPYQEDFPVM TLS
Sbjct: 576 NKSEKWAGGLYVDQSRGDDTLARWSLRNREIENKDIVLWYTLGFHHVPYQEDFPVMTTLS 635

Query: 182 SGFELRPANFFNSN 223
           SGFELRPANFF SN
Sbjct: 636 SGFELRPANFFESN 649


>ref|XP_002278327.1| PREDICTED: primary amine oxidase [Vitis vinifera]
           gi|297737038|emb|CBI26239.3| unnamed protein product
           [Vitis vinifera]
          Length = 676

 Score =  140 bits (354), Expect = 8e-32
 Identities = 61/74 (82%), Positives = 69/74 (93%)
 Frame = +2

Query: 2   NKSEKWVGGEYSDQSRGDDTLATWSARNRAIENKDIVLWYTLGFHHVPYQEDFPVMPTLS 181
           NKSEKWVGG Y+DQSRGDDTLA WS R+R IENKDIV+WYT+GFHHVPYQEDFP+MPT+S
Sbjct: 579 NKSEKWVGGLYTDQSRGDDTLAQWSLRDREIENKDIVMWYTMGFHHVPYQEDFPLMPTIS 638

Query: 182 SGFELRPANFFNSN 223
            GFELRP+NFF+SN
Sbjct: 639 GGFELRPSNFFDSN 652


>emb|CAN68223.1| hypothetical protein VITISV_040530 [Vitis vinifera]
          Length = 1265

 Score =  140 bits (354), Expect = 8e-32
 Identities = 61/74 (82%), Positives = 69/74 (93%)
 Frame = +2

Query: 2   NKSEKWVGGEYSDQSRGDDTLATWSARNRAIENKDIVLWYTLGFHHVPYQEDFPVMPTLS 181
           NKSEKWVGG Y+DQSRGDDTLA WS R+R IENKDIV+WYT+GFHHVPYQEDFP+MPT+S
Sbjct: 589 NKSEKWVGGLYTDQSRGDDTLAQWSLRDREIENKDIVMWYTMGFHHVPYQEDFPLMPTIS 648

Query: 182 SGFELRPANFFNSN 223
            GFELRP+NFF+SN
Sbjct: 649 GGFELRPSNFFDSN 662



 Score =  128 bits (321), Expect = 6e-28
 Identities = 53/74 (71%), Positives = 63/74 (85%)
 Frame = +2

Query: 2    NKSEKWVGGEYSDQSRGDDTLATWSARNRAIENKDIVLWYTLGFHHVPYQEDFPVMPTLS 181
            NKSE+W GG Y+D+SRGDD LA WS RNR+I NKD+V+WYT+GFHH+PYQED+P MPTL 
Sbjct: 1188 NKSERWAGGFYADRSRGDDELAVWSNRNRSIANKDVVVWYTVGFHHIPYQEDYPAMPTLH 1247

Query: 182  SGFELRPANFFNSN 223
             GF+LRPANFF  N
Sbjct: 1248 DGFQLRPANFFERN 1261


Top