BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00027266
         (691 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326594.1| predicted protein [Populus trichocarpa] gi|2...   122   9e-26
emb|CBI40164.3| unnamed protein product [Vitis vinifera]              106   5e-21
ref|XP_002317261.1| predicted protein [Populus trichocarpa] gi|2...   106   5e-21
ref|XP_002301588.1| f-box family protein [Populus trichocarpa] g...   102   7e-20
ref|XP_002279122.1| PREDICTED: F-box protein At3g07870 [Vitis vi...    98   2e-18

>ref|XP_002326594.1| predicted protein [Populus trichocarpa] gi|222833916|gb|EEE72393.1|
           predicted protein [Populus trichocarpa]
          Length = 477

 Score =  122 bits (305), Expect = 9e-26
 Identities = 78/235 (33%), Positives = 124/235 (52%), Gaps = 9/235 (3%)
 Frame = +1

Query: 10  NEYKVVRTIFDFMRNRRLEAEVYTIGSGKWRKL--GKIPCPCPRRSTQVFVEGALHWMAS 183
           +EYKV++ +    +  +LEAE++T+G G W  +  G +  P   R    FV G LHW+ +
Sbjct: 185 DEYKVIQFV---QQPSKLEAEIHTLGKGTWTSIHGGALSPPIDMRCHNAFVGGCLHWIVN 241

Query: 184 EYDESELIIAFDVGKEEFQIIQLPPDYNPDSXXXXXXXXXXXXXXXXXXXFSHLSDDRCE 363
           +  +SE I   + G+E FQ +  PP   P+                    F +   D  +
Sbjct: 242 DPSKSEFIYCLEFGRELFQPVAAPPHLGPND-KDRTGDMMLGVLGGCLYFFDYPLGDSFD 300

Query: 364 VWVMKEYGVRDSWTKEYVI---SRKVSGFSDVFFKPVKLVKNGTILLVVNRKAMVYYEPT 534
           +WVMK+YGV++SWTKE+++   S  +  + D+ ++P+ L+ NG IL+    KAMV Y P 
Sbjct: 301 IWVMKQYGVQESWTKEFILKNPSTDIIWYWDL-YRPISLLSNGEILMSHKSKAMVSYNPE 359

Query: 535 RKRFRKLKISHIPPQFDVITHVGTFISLRGIV--EPTTSKN--CVNSGRWYGTIK 687
            + FR LKI  I   F+   +V +F+S R IV  E T S +  C+++    G +K
Sbjct: 360 DRSFRFLKIYGI-QNFEANPYVPSFLSPREIVKGENTDSNSFLCISTMERQGILK 413


>emb|CBI40164.3| unnamed protein product [Vitis vinifera]
          Length = 423

 Score =  106 bits (264), Expect = 5e-21
 Identities = 65/191 (34%), Positives = 100/191 (52%), Gaps = 6/191 (3%)
 Frame = +1

Query: 10  NEYKVVRTIFDFMRNRRLEAEVYTIGSGKWRKL-GKIPCPCPRRSTQVFVEGALHWMASE 186
           N+YKVVR ++ FMRN+  EA+VY++ +G WRK+   I C      ++ F+ GALHW+A +
Sbjct: 175 NDYKVVRIVY-FMRNKTSEADVYSLRTGSWRKVDANICCYIHSNVSRTFINGALHWLAGK 233

Query: 187 YDESE----LIIAFDVGKEEFQIIQLPPDYNPDSXXXXXXXXXXXXXXXXXXXFSHLSDD 354
            +E +    LI++FD+ K+ F+ I LP D+  D                      H S++
Sbjct: 234 KNEMDNTDNLILSFDMAKDVFKEIMLP-DFGYDELIRKCLADYKGSLSVLFYDAYH-SNE 291

Query: 355 RCEVWVMKEYGVRDSWTKEYVISRKVSGFSDVFFKPVKLVKNGTILLVVNRK-AMVYYEP 531
            C+VWVM+EYGV  SWTK + I  ++         P +   NG  +L   +    + + P
Sbjct: 292 NCDVWVMEEYGVAKSWTKHFTIRHEIE-----IIIPFEFFDNGEAILQKKKSGGFISWNP 346

Query: 532 TRKRFRKLKIS 564
              RFR L +S
Sbjct: 347 DGIRFRDLGVS 357


>ref|XP_002317261.1| predicted protein [Populus trichocarpa] gi|222860326|gb|EEE97873.1|
           predicted protein [Populus trichocarpa]
          Length = 410

 Score =  106 bits (264), Expect = 5e-21
 Identities = 59/209 (28%), Positives = 110/209 (52%), Gaps = 5/209 (2%)
 Frame = +1

Query: 58  RLEAEVYTIGSGKWRKLGKIPCPCPRRSTQVFVEGALHWMAS--EYDESELIIAFDVGKE 231
           R E E+   G  +W+ +G+IP P  ++   V + GALHW+ +  +Y++++LI A D+  +
Sbjct: 207 RSEGEICIFGDNEWKSIGEIPFPDCKKFFGVSLNGALHWILNLDDYEDADLICALDIDSK 266

Query: 232 EFQIIQLPPDYNPDSXXXXXXXXXXXXXXXXXXXFSHLSDDRCEVWVMKEYGVRDSWTKE 411
           + + +  P  +  D+                     +L     ++WVMKEYGV+DSWTKE
Sbjct: 267 KIRPMSPPNGFRRDTTEMTLGVLRDCLFICDSMTLYNL-----DIWVMKEYGVKDSWTKE 321

Query: 412 YVISRK--VSGFSDVFFKPVKLVKNGTILLVVNRKAMVYYEPTRKRFRKLKI-SHIPPQF 582
            VI++    S   + F +P+ + K+G +L+  +    V+Y+P  K F K+ + S +  +F
Sbjct: 322 IVIAKTSLPSNLQNSFLQPIMVSKDGEVLISSDSNVFVWYDPGSKSFTKVTLPSRVGYEF 381

Query: 583 DVITHVGTFISLRGIVEPTTSKNCVNSGR 669
           + +  V +F SL  I++    ++  ++ R
Sbjct: 382 EAVCSVASFDSLSAIMKKECRRDQCSTAR 410


>ref|XP_002301588.1| f-box family protein [Populus trichocarpa]
           gi|222843314|gb|EEE80861.1| f-box family protein
           [Populus trichocarpa]
          Length = 408

 Score =  102 bits (254), Expect = 7e-20
 Identities = 63/228 (27%), Positives = 107/228 (46%), Gaps = 29/228 (12%)
 Frame = +1

Query: 10  NEYKVVRTIF------DFMRNRRL-----EAEVYTIGSGKWRKLGKIPCPCPRRSTQVFV 156
           NEYKV+R ++       + R+RR+     + ++ T+G   WR LGK+     RR+++  V
Sbjct: 177 NEYKVIRIVYYRNGHGRYPRSRRIIYPLSQVQILTLGCPGWRSLGKVSYRLVRRASETLV 236

Query: 157 EGALHWMAS--EYDESELIIAFDVGKEEFQIIQLPPDYNPDSXXXXXXXXXXXXXXXXXX 330
            G LHW++       +  +++FD+  E+F+ +       PD                   
Sbjct: 237 NGRLHWVSRPCRNKPARRLVSFDLTDEQFREVP-----KPDCGGLNRCDYHLAVLRGCLS 291

Query: 331 XFSHLSDDRCEVWVMKEYGVRDSWTKEYVISRKV-SGFSDVFFKPVKL------------ 471
              + +  R E+WVMKEY V++SW KEY I   +  G      +P+K+            
Sbjct: 292 VAVYCNYGRLEIWVMKEYNVKESWVKEYNIGAYMPKGLKQNLVRPLKIWKNASNGRAVRA 351

Query: 472 ---VKNGTILLVVNRKAMVYYEPTRKRFRKLKISHIPPQFDVITHVGT 606
              +KNG ILL    +A+V Y+P + +F+ + +   P  F  + HVG+
Sbjct: 352 LCVLKNGEILLEYKNRALVSYDPKKGKFKDIDLQGTPKWFQTVVHVGS 399


>ref|XP_002279122.1| PREDICTED: F-box protein At3g07870 [Vitis vinifera]
           gi|147785390|emb|CAN68678.1| hypothetical protein
           VITISV_041941 [Vitis vinifera]
          Length = 409

 Score = 97.8 bits (242), Expect = 2e-18
 Identities = 68/225 (30%), Positives = 100/225 (44%), Gaps = 28/225 (12%)
 Frame = +1

Query: 16  YKVVRTIF------DFMRNRRL-----EAEVYTIGSGKWRKLGKIPCPCPRRSTQVFVEG 162
           YKVV+ ++       F R RR+     E +V T+GS  WR LGK+     R  ++  V G
Sbjct: 180 YKVVKVVYYRNGYGGFSRFRRITCSQSEVQVLTLGSPTWRSLGKVSYQLDRWPSEALVNG 239

Query: 163 ALHWMASEYDE-SELIIAFDVGKEEFQIIQLPPDYNPDSXXXXXXXXXXXXXXXXXXXFS 339
            LHW+       +  I++FD+  E+F+ I       PD                      
Sbjct: 240 RLHWVTRPRRYVTRFIVSFDLADEQFREIP-----KPDCGGLSRCNYHLLVLGGCLSAAV 294

Query: 340 HLSDDRCEVWVMKEYGVRDSWTKEYVISRKV-SGFSDVFFKPVK---------------L 471
           H S+ + EVWVMKEY V++SW KE+ I   +  G      +P +               L
Sbjct: 295 HRSNGKLEVWVMKEYDVKESWIKEFNIGAHLPKGLKQDVNRPHRIWRNAPKGRGVRLLCL 354

Query: 472 VKNGTILLVVNRKAMVYYEPTRKRFRKLKISHIPPQFDVITHVGT 606
           +KNG ILL    + +V Y P R +F+ L +  +P  F    HVG+
Sbjct: 355 LKNGEILLEYKGRVLVSYNPERGKFKDLTLKGLPNWFQTFVHVGS 399