BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00027203
         (213 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004159118.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   109   2e-22
ref|XP_004139593.1| PREDICTED: pentatricopeptide repeat-containi...   109   3e-22
ref|XP_002274209.2| PREDICTED: pentatricopeptide repeat-containi...   108   6e-22
ref|XP_002299777.1| predicted protein [Populus trichocarpa] gi|2...   105   4e-21
ref|XP_003541961.1| PREDICTED: pentatricopeptide repeat-containi...   102   2e-20

>ref|XP_004159118.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g05750, chloroplastic-like [Cucumis sativus]
          Length = 525

 Score =  109 bits (273), Expect = 2e-22
 Identities = 51/70 (72%), Positives = 58/70 (82%)
 Frame = +1

Query: 4   AEDALEHFCMIQKEGFKPDGVSYTGALTACSHAGLVEKGLQLYDAMTKVQGIAPRIEHYG 183
           A+++LE F  +QKEGFKPDGVSYTGALTACSHAGLV KGL+L+D M  V  I PRIEHYG
Sbjct: 309 ADESLEFFXAMQKEGFKPDGVSYTGALTACSHAGLVNKGLELFDNMKSVHKITPRIEHYG 368

Query: 184 CMVDLLSRAG 213
           C+VDL  RAG
Sbjct: 369 CIVDLYGRAG 378


>ref|XP_004139593.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05750,
           chloroplastic-like [Cucumis sativus]
          Length = 525

 Score =  109 bits (272), Expect = 3e-22
 Identities = 51/70 (72%), Positives = 58/70 (82%)
 Frame = +1

Query: 4   AEDALEHFCMIQKEGFKPDGVSYTGALTACSHAGLVEKGLQLYDAMTKVQGIAPRIEHYG 183
           A+++LE F  +QKEGFKPDGVSYTGALTACSHAGLV KGL+L+D M  V  I PRIEHYG
Sbjct: 309 ADESLEFFYAMQKEGFKPDGVSYTGALTACSHAGLVNKGLELFDNMKSVHKITPRIEHYG 368

Query: 184 CMVDLLSRAG 213
           C+VDL  RAG
Sbjct: 369 CIVDLYGRAG 378


>ref|XP_002274209.2| PREDICTED: pentatricopeptide repeat-containing protein At1g05750,
           chloroplastic-like [Vitis vinifera]
          Length = 518

 Score =  108 bits (269), Expect = 6e-22
 Identities = 48/70 (68%), Positives = 62/70 (88%)
 Frame = +1

Query: 4   AEDALEHFCMIQKEGFKPDGVSYTGALTACSHAGLVEKGLQLYDAMTKVQGIAPRIEHYG 183
           AE+ALE F +++KEGF+PDGVS+TGALTACSH+GLV++GLQ +D M + + I+PRIEHYG
Sbjct: 306 AEEALEFFNLMRKEGFRPDGVSFTGALTACSHSGLVDEGLQFFDIMKRTRKISPRIEHYG 365

Query: 184 CMVDLLSRAG 213
           C+VDL SRAG
Sbjct: 366 CLVDLYSRAG 375


>ref|XP_002299777.1| predicted protein [Populus trichocarpa] gi|222847035|gb|EEE84582.1|
           predicted protein [Populus trichocarpa]
          Length = 439

 Score =  105 bits (262), Expect = 4e-21
 Identities = 47/69 (68%), Positives = 60/69 (86%)
 Frame = +1

Query: 7   EDALEHFCMIQKEGFKPDGVSYTGALTACSHAGLVEKGLQLYDAMTKVQGIAPRIEHYGC 186
           E+ALEHF ++QK+GFKP+ VS+TGALTACSH GLV++GL+ +D M +V  I+PRIEHYGC
Sbjct: 228 EEALEHFDLMQKQGFKPNDVSFTGALTACSHTGLVDEGLKYFDIMERVHKISPRIEHYGC 287

Query: 187 MVDLLSRAG 213
           +VDL SRAG
Sbjct: 288 IVDLYSRAG 296


>ref|XP_003541961.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05750,
           chloroplastic-like [Glycine max]
          Length = 521

 Score =  102 bits (255), Expect = 2e-20
 Identities = 46/70 (65%), Positives = 60/70 (85%)
 Frame = +1

Query: 4   AEDALEHFCMIQKEGFKPDGVSYTGALTACSHAGLVEKGLQLYDAMTKVQGIAPRIEHYG 183
           A++AL +F  +Q+EGFKPDGVSYTGAL ACSHAGL+ +GL++++ M +V+ I PRIEHYG
Sbjct: 309 ADEALSYFNSMQEEGFKPDGVSYTGALMACSHAGLIGEGLRIFEHMKRVRRILPRIEHYG 368

Query: 184 CMVDLLSRAG 213
           C+VDL SRAG
Sbjct: 369 CLVDLYSRAG 378