BLASTX nr result

ID: Coptis24_contig00027107 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00027107
         (534 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275808.1| PREDICTED: phosphomevalonate kinase [Vitis v...   239   1e-61
ref|XP_004136210.1| PREDICTED: probable phosphomevalonate kinase...   233   1e-59
dbj|BAF98284.1| 5-phosphomevelonate kinase [Hevea brasiliensis]       228   6e-58
gb|AAL18926.1|AF429385_1 phosphomevalonate kinase [Hevea brasili...   228   6e-58
ref|XP_002303445.1| predicted protein [Populus trichocarpa] gi|2...   227   7e-58

>ref|XP_002275808.1| PREDICTED: phosphomevalonate kinase [Vitis vinifera]
           gi|297742018|emb|CBI33805.3| unnamed protein product
           [Vitis vinifera]
          Length = 508

 Score =  239 bits (611), Expect = 1e-61
 Identities = 123/177 (69%), Positives = 137/177 (77%)
 Frame = -3

Query: 532 RNQIEALGLPLTAESLASLPAFSSITFNAEASTGNNCKPEVAKTGLGXXXXXXXXXXXXX 353
           RN IEA GLPLT + LA+LP F+ ITFNAE S G NCKPEVAKTGLG             
Sbjct: 138 RNYIEARGLPLTPDVLAALPPFTPITFNAEESNGENCKPEVAKTGLGSSAAMTTSVVAAL 197

Query: 352 LQYLGVVNLSFSTETLNQEKDDANLDLVHVVAQSAHCIAQGKIGSGFDVSAAVYGSQRYV 173
           L Y GVVNLS   +  +QEKD  +LDLVHV+AQSAHCIAQGK+GSGFDVS+AVYGSQRYV
Sbjct: 198 LHYFGVVNLSSLNKDQHQEKDCVDLDLVHVIAQSAHCIAQGKVGSGFDVSSAVYGSQRYV 257

Query: 172 RFSPGLLSSAQVAMKAQSLQEVISDVLKTKWDHEKTKFCLPPLMTLLLGEPGTGGSS 2
           RFSP +LSSAQVA+K   +QEVI D+LK  WDHE+TKF LPPLMTLLLGEPG GGSS
Sbjct: 258 RFSPEVLSSAQVAVKGLPIQEVIHDILKGNWDHERTKFSLPPLMTLLLGEPGAGGSS 314


>ref|XP_004136210.1| PREDICTED: probable phosphomevalonate kinase-like [Cucumis sativus]
           gi|449508038|ref|XP_004163199.1| PREDICTED: probable
           phosphomevalonate kinase-like [Cucumis sativus]
          Length = 507

 Score =  233 bits (595), Expect = 1e-59
 Identities = 121/177 (68%), Positives = 136/177 (76%)
 Frame = -3

Query: 532 RNQIEALGLPLTAESLASLPAFSSITFNAEASTGNNCKPEVAKTGLGXXXXXXXXXXXXX 353
           R+QIEA GLPLT+ESLASLP FSSITFN E S G NCKPEVAKTGLG             
Sbjct: 139 RSQIEARGLPLTSESLASLPPFSSITFNDEESLGKNCKPEVAKTGLGSSAAMTAAVVAAL 198

Query: 352 LQYLGVVNLSFSTETLNQEKDDANLDLVHVVAQSAHCIAQGKIGSGFDVSAAVYGSQRYV 173
           L YLGVVNLS  T    +++  A LDLVH++AQSAHCIAQGK+GSGFDVS+AVYGSQRYV
Sbjct: 199 LNYLGVVNLSLLTGD-QEQRGSAGLDLVHIIAQSAHCIAQGKVGSGFDVSSAVYGSQRYV 257

Query: 172 RFSPGLLSSAQVAMKAQSLQEVISDVLKTKWDHEKTKFCLPPLMTLLLGEPGTGGSS 2
           RFSP +LSSAQ A     ++EVI D+L  KWDHE+TKF LPPLMTL+LGEPG GGSS
Sbjct: 258 RFSPEVLSSAQAAKNGIPIEEVIVDILNQKWDHERTKFSLPPLMTLVLGEPGVGGSS 314


>dbj|BAF98284.1| 5-phosphomevelonate kinase [Hevea brasiliensis]
          Length = 503

 Score =  228 bits (580), Expect = 6e-58
 Identities = 119/177 (67%), Positives = 139/177 (78%)
 Frame = -3

Query: 532 RNQIEALGLPLTAESLASLPAFSSITFNAEASTGNNCKPEVAKTGLGXXXXXXXXXXXXX 353
           RN+IEA GLPLT ESLA+LP+FSSITFN E + G NCKPEVAKTGLG             
Sbjct: 138 RNEIEACGLPLTPESLAALPSFSSITFNVEEANGQNCKPEVAKTGLGSSAAMTTAVVAAL 197

Query: 352 LQYLGVVNLSFSTETLNQEKDDANLDLVHVVAQSAHCIAQGKIGSGFDVSAAVYGSQRYV 173
           L +LG+V+LS S +    EK  ++LDLVH++AQ+AHCIAQGK+GSGFDVS+AVYGS RYV
Sbjct: 198 LHHLGLVDLSSSCK----EKKFSDLDLVHIIAQTAHCIAQGKVGSGFDVSSAVYGSHRYV 253

Query: 172 RFSPGLLSSAQVAMKAQSLQEVISDVLKTKWDHEKTKFCLPPLMTLLLGEPGTGGSS 2
           RFSP +LSSAQ A K   LQEVIS++LK KWDHE+T F LPPLM+LLLGEPGTGGSS
Sbjct: 254 RFSPEVLSSAQDAGKGIPLQEVISNILKGKWDHERTMFSLPPLMSLLLGEPGTGGSS 310


>gb|AAL18926.1|AF429385_1 phosphomevalonate kinase [Hevea brasiliensis]
          Length = 503

 Score =  228 bits (580), Expect = 6e-58
 Identities = 119/177 (67%), Positives = 139/177 (78%)
 Frame = -3

Query: 532 RNQIEALGLPLTAESLASLPAFSSITFNAEASTGNNCKPEVAKTGLGXXXXXXXXXXXXX 353
           RN+IEA GLPLT ESLA+LP+FSSITFN E + G NCKPEVAKTGLG             
Sbjct: 138 RNEIEACGLPLTPESLAALPSFSSITFNVEEANGQNCKPEVAKTGLGSSAAMTTAVVAAL 197

Query: 352 LQYLGVVNLSFSTETLNQEKDDANLDLVHVVAQSAHCIAQGKIGSGFDVSAAVYGSQRYV 173
           L +LG+V+LS S +    EK  ++LDLVH++AQ+AHCIAQGK+GSGFDVS+AVYGS RYV
Sbjct: 198 LHHLGLVDLSSSCK----EKKFSDLDLVHIIAQTAHCIAQGKVGSGFDVSSAVYGSHRYV 253

Query: 172 RFSPGLLSSAQVAMKAQSLQEVISDVLKTKWDHEKTKFCLPPLMTLLLGEPGTGGSS 2
           RFSP +LSSAQ A K   LQEVIS++LK KWDHE+T F LPPLM+LLLGEPGTGGSS
Sbjct: 254 RFSPEVLSSAQDAGKGIPLQEVISNILKGKWDHERTMFSLPPLMSLLLGEPGTGGSS 310


>ref|XP_002303445.1| predicted protein [Populus trichocarpa] gi|222840877|gb|EEE78424.1|
           predicted protein [Populus trichocarpa]
          Length = 492

 Score =  227 bits (579), Expect = 7e-58
 Identities = 118/177 (66%), Positives = 136/177 (76%)
 Frame = -3

Query: 532 RNQIEALGLPLTAESLASLPAFSSITFNAEASTGNNCKPEVAKTGLGXXXXXXXXXXXXX 353
           RNQIEA GLPLT ESLA+LP F+SITFNAE   G NCKPEVAKTGLG             
Sbjct: 126 RNQIEARGLPLTPESLAALPPFTSITFNAEEENGQNCKPEVAKTGLGSSAAMTTAVVAAL 185

Query: 352 LQYLGVVNLSFSTETLNQEKDDANLDLVHVVAQSAHCIAQGKIGSGFDVSAAVYGSQRYV 173
           L YLGVV+LS     L++ +  A+LD+VH++AQ+AHCIAQGKIGSGFDVS+AVYGS RYV
Sbjct: 186 LHYLGVVDLS----PLSKNEGSADLDVVHIIAQTAHCIAQGKIGSGFDVSSAVYGSHRYV 241

Query: 172 RFSPGLLSSAQVAMKAQSLQEVISDVLKTKWDHEKTKFCLPPLMTLLLGEPGTGGSS 2
           RFSP +LSSAQ A+    LQEV++ +LK KWDHE+TKF LPP M LLLGEPGTGGSS
Sbjct: 242 RFSPDVLSSAQDALNGTPLQEVMAAILKGKWDHERTKFSLPPSMNLLLGEPGTGGSS 298


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