BLASTX nr result
ID: Coptis24_contig00027063
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00027063 (518 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI39613.3| unnamed protein product [Vitis vinifera] 68 7e-10 emb|CAN64717.1| hypothetical protein VITISV_026718 [Vitis vinifera] 67 1e-09 emb|CAN63272.1| hypothetical protein VITISV_000396 [Vitis vinifera] 67 2e-09 ref|XP_002316052.1| predicted protein [Populus trichocarpa] gi|2... 66 3e-09 ref|XP_002330029.1| predicted protein [Populus trichocarpa] gi|2... 63 3e-08 >emb|CBI39613.3| unnamed protein product [Vitis vinifera] Length = 154 Score = 68.2 bits (165), Expect = 7e-10 Identities = 44/89 (49%), Positives = 49/89 (55%) Frame = -2 Query: 289 VHPQKTKKKQSIATKAKDSKAVINDQNTLSTIEKSKSGSLNEIGPHQDVIYEKLMSGHRN 110 V PQK KKKQS+ +A DSKAV +TLST EKS+SG N H YE+ SGHR Sbjct: 44 VQPQKRKKKQSMEIRATDSKAVTRLHSTLSTTEKSRSGHRNPRLDHLGEKYEETSSGHRK 103 Query: 109 IEVDIEKSKSGHRNIVDDHDPLSLPMFLS 23 IE S S RNI DH FLS Sbjct: 104 IESSGVNSSSSQRNI--DHPQAISVDFLS 130 >emb|CAN64717.1| hypothetical protein VITISV_026718 [Vitis vinifera] Length = 154 Score = 67.4 bits (163), Expect = 1e-09 Identities = 44/89 (49%), Positives = 49/89 (55%) Frame = -2 Query: 289 VHPQKTKKKQSIATKAKDSKAVINDQNTLSTIEKSKSGSLNEIGPHQDVIYEKLMSGHRN 110 V PQK KKKQS+ +A DSKAV +TLST EKS+SG N H YE+ SGHR Sbjct: 44 VQPQKRKKKQSMEIRATDSKAVTRLHSTLSTTEKSRSGHRNPRLGHLGEKYEETSSGHRK 103 Query: 109 IEVDIEKSKSGHRNIVDDHDPLSLPMFLS 23 IE S S RNI DH FLS Sbjct: 104 IESGGVNSSSSQRNI--DHPQAISVDFLS 130 >emb|CAN63272.1| hypothetical protein VITISV_000396 [Vitis vinifera] Length = 169 Score = 66.6 bits (161), Expect = 2e-09 Identities = 27/43 (62%), Positives = 33/43 (76%) Frame = +3 Query: 48 GSWSSTMFRWPDFDFSISTSIFRWPDINFSYITSWWGPISFRL 176 G WS++ FRWP+FDFSIS SIFRWP+ +FSY T+ W SF L Sbjct: 3 GRWSASTFRWPEFDFSISFSIFRWPEFDFSYFTAGWSTQSFSL 45 >ref|XP_002316052.1| predicted protein [Populus trichocarpa] gi|222865092|gb|EEF02223.1| predicted protein [Populus trichocarpa] Length = 82 Score = 66.2 bits (160), Expect = 3e-09 Identities = 36/72 (50%), Positives = 48/72 (66%), Gaps = 1/72 (1%) Frame = +3 Query: 45 RGSWSSTMFRWPDFDFSI-STSIFRWPDINFSYITSWWGPISFRLPDLDFSIVDSVFWSL 221 R W ++FRWP+F FS+ S+SI RWP+ +FSY T+ S R LDF+I D V W+ Sbjct: 2 RPMWYPSIFRWPEFGFSMPSSSILRWPEFDFSYFTTRLTLESLRW--LDFAI-DDVLWTF 58 Query: 222 ITAFESLALVAM 257 +TA ES+AL AM Sbjct: 59 VTALESVALTAM 70 >ref|XP_002330029.1| predicted protein [Populus trichocarpa] gi|222871454|gb|EEF08585.1| predicted protein [Populus trichocarpa] Length = 96 Score = 62.8 bits (151), Expect = 3e-08 Identities = 36/82 (43%), Positives = 48/82 (58%), Gaps = 12/82 (14%) Frame = +3 Query: 48 GSWSSTMFR-WPDFDFSISTS--------IFRWPDI--NFSYITSWWGPISF-RLPDLDF 191 G WS++ FR W D + +TS + RWP + + WW P R P+LDF Sbjct: 3 GRWSTSTFRQWLGLDVAYTTSSIWASSISVLRWPSQLRTTTNPSRWWAPPRMMRWPELDF 62 Query: 192 SIVDSVFWSLITAFESLALVAM 257 SI+D V WSL+TAFES+ALV+M Sbjct: 63 SILDDVVWSLVTAFESVALVSM 84