BLASTX nr result

ID: Coptis24_contig00027063 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00027063
         (518 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI39613.3| unnamed protein product [Vitis vinifera]               68   7e-10
emb|CAN64717.1| hypothetical protein VITISV_026718 [Vitis vinifera]    67   1e-09
emb|CAN63272.1| hypothetical protein VITISV_000396 [Vitis vinifera]    67   2e-09
ref|XP_002316052.1| predicted protein [Populus trichocarpa] gi|2...    66   3e-09
ref|XP_002330029.1| predicted protein [Populus trichocarpa] gi|2...    63   3e-08

>emb|CBI39613.3| unnamed protein product [Vitis vinifera]
          Length = 154

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 44/89 (49%), Positives = 49/89 (55%)
 Frame = -2

Query: 289 VHPQKTKKKQSIATKAKDSKAVINDQNTLSTIEKSKSGSLNEIGPHQDVIYEKLMSGHRN 110
           V PQK KKKQS+  +A DSKAV    +TLST EKS+SG  N    H    YE+  SGHR 
Sbjct: 44  VQPQKRKKKQSMEIRATDSKAVTRLHSTLSTTEKSRSGHRNPRLDHLGEKYEETSSGHRK 103

Query: 109 IEVDIEKSKSGHRNIVDDHDPLSLPMFLS 23
           IE     S S  RNI  DH       FLS
Sbjct: 104 IESSGVNSSSSQRNI--DHPQAISVDFLS 130


>emb|CAN64717.1| hypothetical protein VITISV_026718 [Vitis vinifera]
          Length = 154

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 44/89 (49%), Positives = 49/89 (55%)
 Frame = -2

Query: 289 VHPQKTKKKQSIATKAKDSKAVINDQNTLSTIEKSKSGSLNEIGPHQDVIYEKLMSGHRN 110
           V PQK KKKQS+  +A DSKAV    +TLST EKS+SG  N    H    YE+  SGHR 
Sbjct: 44  VQPQKRKKKQSMEIRATDSKAVTRLHSTLSTTEKSRSGHRNPRLGHLGEKYEETSSGHRK 103

Query: 109 IEVDIEKSKSGHRNIVDDHDPLSLPMFLS 23
           IE     S S  RNI  DH       FLS
Sbjct: 104 IESGGVNSSSSQRNI--DHPQAISVDFLS 130


>emb|CAN63272.1| hypothetical protein VITISV_000396 [Vitis vinifera]
          Length = 169

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 27/43 (62%), Positives = 33/43 (76%)
 Frame = +3

Query: 48  GSWSSTMFRWPDFDFSISTSIFRWPDINFSYITSWWGPISFRL 176
           G WS++ FRWP+FDFSIS SIFRWP+ +FSY T+ W   SF L
Sbjct: 3   GRWSASTFRWPEFDFSISFSIFRWPEFDFSYFTAGWSTQSFSL 45


>ref|XP_002316052.1| predicted protein [Populus trichocarpa] gi|222865092|gb|EEF02223.1|
           predicted protein [Populus trichocarpa]
          Length = 82

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 36/72 (50%), Positives = 48/72 (66%), Gaps = 1/72 (1%)
 Frame = +3

Query: 45  RGSWSSTMFRWPDFDFSI-STSIFRWPDINFSYITSWWGPISFRLPDLDFSIVDSVFWSL 221
           R  W  ++FRWP+F FS+ S+SI RWP+ +FSY T+     S R   LDF+I D V W+ 
Sbjct: 2   RPMWYPSIFRWPEFGFSMPSSSILRWPEFDFSYFTTRLTLESLRW--LDFAI-DDVLWTF 58

Query: 222 ITAFESLALVAM 257
           +TA ES+AL AM
Sbjct: 59  VTALESVALTAM 70


>ref|XP_002330029.1| predicted protein [Populus trichocarpa] gi|222871454|gb|EEF08585.1|
           predicted protein [Populus trichocarpa]
          Length = 96

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 36/82 (43%), Positives = 48/82 (58%), Gaps = 12/82 (14%)
 Frame = +3

Query: 48  GSWSSTMFR-WPDFDFSISTS--------IFRWPDI--NFSYITSWWGPISF-RLPDLDF 191
           G WS++ FR W   D + +TS        + RWP      +  + WW P    R P+LDF
Sbjct: 3   GRWSTSTFRQWLGLDVAYTTSSIWASSISVLRWPSQLRTTTNPSRWWAPPRMMRWPELDF 62

Query: 192 SIVDSVFWSLITAFESLALVAM 257
           SI+D V WSL+TAFES+ALV+M
Sbjct: 63  SILDDVVWSLVTAFESVALVSM 84