BLASTX nr result

ID: Coptis24_contig00027029 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00027029
         (275 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002319644.1| predicted protein [Populus trichocarpa] gi|2...    58   9e-07
gb|ABK94412.1| unknown [Populus trichocarpa]                           58   9e-07
ref|XP_004156471.1| PREDICTED: ankyrin-1-like [Cucumis sativus]        56   3e-06
ref|XP_004139242.1| PREDICTED: LOW QUALITY PROTEIN: ankyrin-1-li...    56   3e-06

>ref|XP_002319644.1| predicted protein [Populus trichocarpa] gi|222858020|gb|EEE95567.1|
           predicted protein [Populus trichocarpa]
          Length = 451

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 31/76 (40%), Positives = 42/76 (55%), Gaps = 8/76 (10%)
 Frame = +2

Query: 23  EENFKQAKTMAEDALCEKNYSTAISSYNKAIVLDPTNESILSNWSLCW--------ALFK 178
           +E   +AK+  +DA     Y TA++ Y +AI LDPTN ++LSN SLCW        AL  
Sbjct: 317 KERAAEAKSRGDDAFKRNEYLTAVNDYAQAIDLDPTNAAVLSNRSLCWIRLGKPDQALAD 376

Query: 179 VNAKRALYFEWPAPYY 226
             A R L  +WP  +Y
Sbjct: 377 AKACRELKPDWPKAWY 392


>gb|ABK94412.1| unknown [Populus trichocarpa]
          Length = 167

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 31/76 (40%), Positives = 42/76 (55%), Gaps = 8/76 (10%)
 Frame = +2

Query: 23  EENFKQAKTMAEDALCEKNYSTAISSYNKAIVLDPTNESILSNWSLCW--------ALFK 178
           +E   +AK+  +DA     Y TA++ Y +AI LDPTN ++LSN SLCW        AL  
Sbjct: 38  KERAAEAKSRGDDAFKRNEYLTAVNDYAQAIDLDPTNAAVLSNRSLCWIRLGKPDQALAD 97

Query: 179 VNAKRALYFEWPAPYY 226
             A R L  +WP  +Y
Sbjct: 98  AKACRELKPDWPKAWY 113


>ref|XP_004156471.1| PREDICTED: ankyrin-1-like [Cucumis sativus]
          Length = 458

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 30/71 (42%), Positives = 42/71 (59%), Gaps = 8/71 (11%)
 Frame = +2

Query: 38  QAKTMAEDALCEKNYSTAISSYNKAIVLDPTNESILSNWSLCW--------ALFKVNAKR 193
           +AK+  +DA   K++ TA+ +Y +AI LDPT+ ++LSN SLCW        AL    A R
Sbjct: 334 EAKSRGDDAFNTKDFHTAVDAYTQAIDLDPTDGTLLSNRSLCWIRLGQAEHALADAKACR 393

Query: 194 ALYFEWPAPYY 226
           AL  +WP   Y
Sbjct: 394 ALKPDWPKACY 404


>ref|XP_004139242.1| PREDICTED: LOW QUALITY PROTEIN: ankyrin-1-like [Cucumis sativus]
          Length = 454

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 30/71 (42%), Positives = 42/71 (59%), Gaps = 8/71 (11%)
 Frame = +2

Query: 38  QAKTMAEDALCEKNYSTAISSYNKAIVLDPTNESILSNWSLCW--------ALFKVNAKR 193
           +AK+  +DA   K++ TA+ +Y +AI LDPT+ ++LSN SLCW        AL    A R
Sbjct: 330 EAKSRGDDAFNTKDFHTAVDAYTQAIDLDPTDGTLLSNRSLCWIRLGQAEHALADAKACR 389

Query: 194 ALYFEWPAPYY 226
           AL  +WP   Y
Sbjct: 390 ALKPDWPKACY 400


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