BLASTX nr result

ID: Coptis24_contig00027017 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00027017
         (1041 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268569.1| PREDICTED: transcription factor TCP15-like [...   106   2e-45
emb|CBI15239.3| unnamed protein product [Vitis vinifera]              106   4e-44
ref|XP_004173372.1| PREDICTED: transcription factor TCP14-like [...   106   4e-41
ref|XP_004138164.1| PREDICTED: transcription factor TCP14-like [...   106   4e-41
ref|NP_001233815.1| TCP transcription factor 17 [Solanum lycoper...   106   9e-40

>ref|XP_002268569.1| PREDICTED: transcription factor TCP15-like [Vitis vinifera]
          Length = 369

 Score =  106 bits (264), Expect(2) = 2e-45
 Identities = 51/53 (96%), Positives = 52/53 (98%)
 Frame = -1

Query: 195 RIRMPATCAARVFQLTKELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFT 37
           RIRMPA CAARVFQLT+ELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFT
Sbjct: 80  RIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFT 132



 Score =  103 bits (258), Expect(2) = 2e-45
 Identities = 56/82 (68%), Positives = 65/82 (79%), Gaps = 1/82 (1%)
 Frame = -3

Query: 529 IMEGDSGIRRPNFPLQLLEKKDDEICSSSSGYPSLAISAERPETSTIQSNTSLQ-TAEQA 353
           +MEG   + RPNFP QLLEKK++E CSSS GYPSLAIS+  P T+  +SN+SLQ  AE +
Sbjct: 1   MMEGGDELHRPNFPFQLLEKKEEEACSSS-GYPSLAISSAEPNTN--RSNSSLQIAAEPS 57

Query: 352 KKVTPKRTSTKDRHTKVDGRGR 287
           KK  PKRTSTKDRHTKVDGRGR
Sbjct: 58  KKPPPKRTSTKDRHTKVDGRGR 79


>emb|CBI15239.3| unnamed protein product [Vitis vinifera]
          Length = 345

 Score =  106 bits (264), Expect(2) = 4e-44
 Identities = 51/53 (96%), Positives = 52/53 (98%)
 Frame = -1

Query: 195 RIRMPATCAARVFQLTKELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFT 37
           RIRMPA CAARVFQLT+ELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFT
Sbjct: 89  RIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFT 141



 Score = 99.4 bits (246), Expect(2) = 4e-44
 Identities = 55/81 (67%), Positives = 64/81 (79%), Gaps = 1/81 (1%)
 Frame = -3

Query: 526 MEGDSGIRRPNFPLQLLEKKDDEICSSSSGYPSLAISAERPETSTIQSNTSLQ-TAEQAK 350
           + GD  + RPNFP QLLEKK++E CSSS GYPSLAIS+  P T+  +SN+SLQ  AE +K
Sbjct: 12  LRGDE-LHRPNFPFQLLEKKEEEACSSS-GYPSLAISSAEPNTN--RSNSSLQIAAEPSK 67

Query: 349 KVTPKRTSTKDRHTKVDGRGR 287
           K  PKRTSTKDRHTKVDGRGR
Sbjct: 68  KPPPKRTSTKDRHTKVDGRGR 88


>ref|XP_004173372.1| PREDICTED: transcription factor TCP14-like [Cucumis sativus]
          Length = 421

 Score =  106 bits (264), Expect(2) = 4e-41
 Identities = 51/53 (96%), Positives = 52/53 (98%)
 Frame = -1

Query: 195 RIRMPATCAARVFQLTKELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFT 37
           RIRMPA CAARVFQLT+ELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFT
Sbjct: 108 RIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFT 160



 Score = 89.4 bits (220), Expect(2) = 4e-41
 Identities = 49/75 (65%), Positives = 56/75 (74%), Gaps = 3/75 (4%)
 Frame = -3

Query: 502 RPNFPLQLLEKKDDEICS-SSSGYPSLAISAERPETSTIQSNT--SLQTAEQAKKVTPKR 332
           RP FP QLLEKKDD+  S S+S YPSLAISA+   T+T  + T  S+  AE +KK  PKR
Sbjct: 33  RPTFPFQLLEKKDDDAASCSTSPYPSLAISADTTTTTTTTTTTTSSVVAAETSKKPPPKR 92

Query: 331 TSTKDRHTKVDGRGR 287
           TSTKDRHTKVDGRGR
Sbjct: 93  TSTKDRHTKVDGRGR 107


>ref|XP_004138164.1| PREDICTED: transcription factor TCP14-like [Cucumis sativus]
          Length = 413

 Score =  106 bits (264), Expect(2) = 4e-41
 Identities = 51/53 (96%), Positives = 52/53 (98%)
 Frame = -1

Query: 195 RIRMPATCAARVFQLTKELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFT 37
           RIRMPA CAARVFQLT+ELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFT
Sbjct: 104 RIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFT 156



 Score = 89.4 bits (220), Expect(2) = 4e-41
 Identities = 49/75 (65%), Positives = 56/75 (74%), Gaps = 3/75 (4%)
 Frame = -3

Query: 502 RPNFPLQLLEKKDDEICS-SSSGYPSLAISAERPETSTIQSNT--SLQTAEQAKKVTPKR 332
           RP FP QLLEKKDD+  S S+S YPSLAISA+   T+T  + T  S+  AE +KK  PKR
Sbjct: 29  RPTFPFQLLEKKDDDAASCSTSPYPSLAISADTTTTTTTTTTTTSSVVAAETSKKPPPKR 88

Query: 331 TSTKDRHTKVDGRGR 287
           TSTKDRHTKVDGRGR
Sbjct: 89  TSTKDRHTKVDGRGR 103


>ref|NP_001233815.1| TCP transcription factor 17 [Solanum lycopersicum]
           gi|306416845|gb|ADM87266.1| TCP transcription factor 17
           [Solanum lycopersicum]
          Length = 416

 Score =  106 bits (264), Expect(2) = 9e-40
 Identities = 51/53 (96%), Positives = 52/53 (98%)
 Frame = -1

Query: 195 RIRMPATCAARVFQLTKELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFT 37
           RIRMPA CAARVFQLT+ELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFT
Sbjct: 109 RIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFT 161



 Score = 84.7 bits (208), Expect(2) = 9e-40
 Identities = 49/82 (59%), Positives = 54/82 (65%), Gaps = 9/82 (10%)
 Frame = -3

Query: 505 RRPNFPLQLLEKKDDEICSSSSG-----YPSLAISAERPETSTIQSNTSLQ----TAEQA 353
           R  NFP QLLEKK+DE CSSSS      YPSLAIS     T+   ++  LQ    + E A
Sbjct: 27  RPNNFPFQLLEKKEDEPCSSSSAANNINYPSLAISPSDTNTNINPNSNDLQITVASTETA 86

Query: 352 KKVTPKRTSTKDRHTKVDGRGR 287
           KK  PKRTSTKDRHTKVDGRGR
Sbjct: 87  KKPAPKRTSTKDRHTKVDGRGR 108


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