BLASTX nr result
ID: Coptis24_contig00027003
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00027003 (406 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAN60458.1| hypothetical protein VITISV_019556 [Vitis vinifera] 91 7e-17 emb|CBI15905.3| unnamed protein product [Vitis vinifera] 91 1e-16 ref|XP_002278283.1| PREDICTED: uncharacterized protein LOC100265... 91 1e-16 ref|XP_002298496.1| predicted protein [Populus trichocarpa] gi|2... 85 5e-15 ref|XP_002313971.1| predicted protein [Populus trichocarpa] gi|2... 80 2e-13 >emb|CAN60458.1| hypothetical protein VITISV_019556 [Vitis vinifera] Length = 231 Score = 91.3 bits (225), Expect = 7e-17 Identities = 47/72 (65%), Positives = 50/72 (69%) Frame = -2 Query: 216 MDSISGGGSTDMNITEGSSAATXXXXXXXXXXXXVPLSRYESQKRRDWNTFLQYLKNHKP 37 MDS SGGG+ D + EG SA P SRYESQKRRDWNTFLQYLKNHKP Sbjct: 1 MDSASGGGAADPSSGEGPSAG--GGGGAAEGSSPAPPSRYESQKRRDWNTFLQYLKNHKP 58 Query: 36 PLSLARCSGAHV 1 PL+LARCSGAHV Sbjct: 59 PLTLARCSGAHV 70 >emb|CBI15905.3| unnamed protein product [Vitis vinifera] Length = 226 Score = 90.9 bits (224), Expect = 1e-16 Identities = 47/73 (64%), Positives = 51/73 (69%) Frame = -2 Query: 219 LMDSISGGGSTDMNITEGSSAATXXXXXXXXXXXXVPLSRYESQKRRDWNTFLQYLKNHK 40 +MDS SGGG+ D + EG SA P SRYESQKRRDWNTFLQYLKNHK Sbjct: 41 VMDSASGGGAADPSGGEGPSAG--GGGGAAEGSSPAPPSRYESQKRRDWNTFLQYLKNHK 98 Query: 39 PPLSLARCSGAHV 1 PPL+LARCSGAHV Sbjct: 99 PPLTLARCSGAHV 111 >ref|XP_002278283.1| PREDICTED: uncharacterized protein LOC100265705 [Vitis vinifera] Length = 231 Score = 90.5 bits (223), Expect = 1e-16 Identities = 47/72 (65%), Positives = 50/72 (69%) Frame = -2 Query: 216 MDSISGGGSTDMNITEGSSAATXXXXXXXXXXXXVPLSRYESQKRRDWNTFLQYLKNHKP 37 MDS SGGG+ D + EG SA P SRYESQKRRDWNTFLQYLKNHKP Sbjct: 1 MDSASGGGAADPSGGEGPSAG--GGGGAAEGSSPAPPSRYESQKRRDWNTFLQYLKNHKP 58 Query: 36 PLSLARCSGAHV 1 PL+LARCSGAHV Sbjct: 59 PLTLARCSGAHV 70 >ref|XP_002298496.1| predicted protein [Populus trichocarpa] gi|222845754|gb|EEE83301.1| predicted protein [Populus trichocarpa] Length = 228 Score = 85.1 bits (209), Expect = 5e-15 Identities = 45/81 (55%), Positives = 50/81 (61%), Gaps = 9/81 (11%) Frame = -2 Query: 216 MDSISGGGSTD---------MNITEGSSAATXXXXXXXXXXXXVPLSRYESQKRRDWNTF 64 MDS SGG + T GSS+A+ P SRYESQKRRDWNTF Sbjct: 1 MDSTSGGATAPGPNSGEPCPSAATAGSSSASQPQQQPEGSSPPAPPSRYESQKRRDWNTF 60 Query: 63 LQYLKNHKPPLSLARCSGAHV 1 LQY+KNHKPPL+LARCSGAHV Sbjct: 61 LQYIKNHKPPLTLARCSGAHV 81 >ref|XP_002313971.1| predicted protein [Populus trichocarpa] gi|222850379|gb|EEE87926.1| predicted protein [Populus trichocarpa] Length = 223 Score = 79.7 bits (195), Expect = 2e-13 Identities = 46/81 (56%), Positives = 49/81 (60%), Gaps = 9/81 (11%) Frame = -2 Query: 216 MDSISGGGST-DMNITE--------GSSAATXXXXXXXXXXXXVPLSRYESQKRRDWNTF 64 MDS SG S D N E +SA+ P SRYESQKRRDWNTF Sbjct: 1 MDSTSGVASAPDPNSGEPGPSAGSSSASASLPQQQQPEGSSPPAPPSRYESQKRRDWNTF 60 Query: 63 LQYLKNHKPPLSLARCSGAHV 1 LQYLKNHKPPL+LARCSGAHV Sbjct: 61 LQYLKNHKPPLTLARCSGAHV 81