BLASTX nr result

ID: Coptis24_contig00026968 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00026968
         (229 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AET07179.1| CYC7 [Rosa hybrid cultivar]                            131   5e-29
ref|XP_002307205.1| predicted protein [Populus trichocarpa] gi|2...   128   4e-28
ref|XP_002280079.2| PREDICTED: cyclin-B2-4 [Vitis vinifera]           128   6e-28
emb|CBI19854.3| unnamed protein product [Vitis vinifera]              128   6e-28
emb|CAN75366.1| hypothetical protein VITISV_030646 [Vitis vinifera]   128   6e-28

>gb|AET07179.1| CYC7 [Rosa hybrid cultivar]
          Length = 361

 Score =  131 bits (330), Expect = 5e-29
 Identities = 63/75 (84%), Positives = 68/75 (90%)
 Frame = -3

Query: 227 TPYVFMRRFLKAAQSDKKLELLSFYMIELCLVEYEMLKFPPSLLAAAAIYTAQCVVNRFK 48
           T YVFMRRFLKAAQSDKKLELLSF++IELCLVEYEMLKFPPSLLAAAAIYTAQC + RFK
Sbjct: 239 TSYVFMRRFLKAAQSDKKLELLSFFLIELCLVEYEMLKFPPSLLAAAAIYTAQCSLLRFK 298

Query: 47  QWNKTCVWYTTYPEN 3
           QW+KT  WYT Y E+
Sbjct: 299 QWSKTSEWYTNYSED 313


>ref|XP_002307205.1| predicted protein [Populus trichocarpa] gi|222856654|gb|EEE94201.1|
           predicted protein [Populus trichocarpa]
          Length = 427

 Score =  128 bits (322), Expect = 4e-28
 Identities = 59/74 (79%), Positives = 68/74 (91%)
 Frame = -3

Query: 227 TPYVFMRRFLKAAQSDKKLELLSFYMIELCLVEYEMLKFPPSLLAAAAIYTAQCVVNRFK 48
           TPYVFM+RFLKAAQSDKKLELLSF++IEL LVEYEMLKFPPSLLAA+AIYTAQC +  FK
Sbjct: 308 TPYVFMQRFLKAAQSDKKLELLSFFLIELSLVEYEMLKFPPSLLAASAIYTAQCTIYGFK 367

Query: 47  QWNKTCVWYTTYPE 6
           +WNKTC W+++Y E
Sbjct: 368 EWNKTCEWHSSYSE 381


>ref|XP_002280079.2| PREDICTED: cyclin-B2-4 [Vitis vinifera]
          Length = 437

 Score =  128 bits (321), Expect = 6e-28
 Identities = 60/74 (81%), Positives = 66/74 (89%)
 Frame = -3

Query: 227 TPYVFMRRFLKAAQSDKKLELLSFYMIELCLVEYEMLKFPPSLLAAAAIYTAQCVVNRFK 48
           TPYVFMRRFLKAAQSDKKLELLSF++IELCLVEYEMLKF PSLLAAAAI+TAQC +N  K
Sbjct: 312 TPYVFMRRFLKAAQSDKKLELLSFFIIELCLVEYEMLKFSPSLLAAAAIFTAQCTLNGSK 371

Query: 47  QWNKTCVWYTTYPE 6
            W++TC WYT Y E
Sbjct: 372 HWSRTCEWYTRYTE 385


>emb|CBI19854.3| unnamed protein product [Vitis vinifera]
          Length = 441

 Score =  128 bits (321), Expect = 6e-28
 Identities = 60/74 (81%), Positives = 66/74 (89%)
 Frame = -3

Query: 227 TPYVFMRRFLKAAQSDKKLELLSFYMIELCLVEYEMLKFPPSLLAAAAIYTAQCVVNRFK 48
           TPYVFMRRFLKAAQSDKKLELLSF++IELCLVEYEMLKF PSLLAAAAI+TAQC +N  K
Sbjct: 316 TPYVFMRRFLKAAQSDKKLELLSFFIIELCLVEYEMLKFSPSLLAAAAIFTAQCTLNGSK 375

Query: 47  QWNKTCVWYTTYPE 6
            W++TC WYT Y E
Sbjct: 376 HWSRTCEWYTRYTE 389


>emb|CAN75366.1| hypothetical protein VITISV_030646 [Vitis vinifera]
          Length = 1049

 Score =  128 bits (321), Expect = 6e-28
 Identities = 60/74 (81%), Positives = 66/74 (89%)
 Frame = -3

Query: 227  TPYVFMRRFLKAAQSDKKLELLSFYMIELCLVEYEMLKFPPSLLAAAAIYTAQCVVNRFK 48
            TPYVFMRRFLKAAQSDKKLELLSF++IELCLVEYEMLKF PSLLAAAAI+TAQC +N  K
Sbjct: 972  TPYVFMRRFLKAAQSDKKLELLSFFIIELCLVEYEMLKFSPSLLAAAAIFTAQCTLNGSK 1031

Query: 47   QWNKTCVWYTTYPE 6
             W++TC WYT Y E
Sbjct: 1032 HWSRTCEWYTRYTE 1045


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