BLASTX nr result

ID: Coptis24_contig00026949 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00026949
         (238 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN65440.1| hypothetical protein VITISV_011417 [Vitis vinifera]   106   2e-21
ref|XP_002320765.1| AP2/ERF domain-containing transcription fact...   103   2e-20
ref|XP_002511793.1| hypothetical protein RCOM_1613750 [Ricinus c...    95   7e-18
ref|XP_002301322.1| AP2/ERF domain-containing transcription fact...    83   2e-14
ref|XP_003529962.1| PREDICTED: ethylene-responsive transcription...    77   1e-12

>emb|CAN65440.1| hypothetical protein VITISV_011417 [Vitis vinifera]
          Length = 345

 Score =  106 bits (265), Expect = 2e-21
 Identities = 52/66 (78%), Positives = 61/66 (92%), Gaps = 1/66 (1%)
 Frame = +1

Query: 1   AKLSKNLQSIIARTKDNKSAKTRVSDHFTFASIF-KRNHQYQSPIDMKNIEKAVQPSIIV 177
           AKLSKNLQSI+ART DNKS+K+RVSDHFTFASIF  R++ YQSP+DMK++EK VQPSIIV
Sbjct: 193 AKLSKNLQSIMARTSDNKSSKSRVSDHFTFASIFHSRSYHYQSPVDMKSMEKVVQPSIIV 252

Query: 178 PHIADE 195
           PH+ADE
Sbjct: 253 PHVADE 258


>ref|XP_002320765.1| AP2/ERF domain-containing transcription factor [Populus
           trichocarpa] gi|222861538|gb|EEE99080.1| AP2/ERF
           domain-containing transcription factor [Populus
           trichocarpa]
          Length = 306

 Score =  103 bits (256), Expect = 2e-20
 Identities = 50/65 (76%), Positives = 58/65 (89%), Gaps = 1/65 (1%)
 Frame = +1

Query: 1   AKLSKNLQSIIARTKDNKSAKTRVSDHFTFASIFK-RNHQYQSPIDMKNIEKAVQPSIIV 177
           AKLSKNLQSI+ART +NKS K RVSDHFTFA+IF  R HQYQ+P+DMK+IEK VQPSIIV
Sbjct: 122 AKLSKNLQSIMARTTENKSTKNRVSDHFTFANIFHFRGHQYQNPVDMKSIEKVVQPSIIV 181

Query: 178 PHIAD 192
           PH++D
Sbjct: 182 PHVSD 186


>ref|XP_002511793.1| hypothetical protein RCOM_1613750 [Ricinus communis]
           gi|223548973|gb|EEF50462.1| hypothetical protein
           RCOM_1613750 [Ricinus communis]
          Length = 291

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 47/65 (72%), Positives = 55/65 (84%), Gaps = 1/65 (1%)
 Frame = +1

Query: 1   AKLSKNLQSIIARTKDNKSAKTRVSDHFTFASIFK-RNHQYQSPIDMKNIEKAVQPSIIV 177
           AKLSKNLQSI+ART +++S K RVSDHFTFA+IF  R+ QYQ P+DMK IEK VQPSIIV
Sbjct: 123 AKLSKNLQSIMARTTESRSTKNRVSDHFTFANIFHFRSQQYQKPVDMKKIEKVVQPSIIV 182

Query: 178 PHIAD 192
           PH A+
Sbjct: 183 PHAAE 187


>ref|XP_002301322.1| AP2/ERF domain-containing transcription factor [Populus
           trichocarpa] gi|222843048|gb|EEE80595.1| AP2/ERF
           domain-containing transcription factor [Populus
           trichocarpa]
          Length = 230

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 40/57 (70%), Positives = 50/57 (87%), Gaps = 1/57 (1%)
 Frame = +1

Query: 1   AKLSKNLQSIIARTKDNKSAKTRVSDHFTFASIFK-RNHQYQSPIDMKNIEKAVQPS 168
           A+LSKNLQSI+ART +NKS K RVSDHFTFA+IF  R++QYQ+P+D KNI+K VQP+
Sbjct: 121 ARLSKNLQSIMARTTENKSTKNRVSDHFTFANIFHCRSYQYQNPVDTKNIQKVVQPA 177


>ref|XP_003529962.1| PREDICTED: ethylene-responsive transcription factor 4-like [Glycine
           max]
          Length = 333

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 43/65 (66%), Positives = 51/65 (78%), Gaps = 5/65 (7%)
 Frame = +1

Query: 1   AKLSKNLQSIIARTKD----NKSAKTRVSDHFTFASIF-KRNHQYQSPIDMKNIEKAVQP 165
           AKLSKNLQ+I+AR  D    NKS+K+RVSDHFTFASIF +R++Q      MKNI+K VQP
Sbjct: 128 AKLSKNLQNIMARASDHNNNNKSSKSRVSDHFTFASIFHRRSYQIPEGDTMKNIDKVVQP 187

Query: 166 SIIVP 180
           SIIVP
Sbjct: 188 SIIVP 192


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