BLASTX nr result

ID: Coptis24_contig00026865 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00026865
         (217 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBX33211.1| NADH dehydrogenase subunit 2 (mitochondrion) [Be...   142   4e-32
ref|YP_005090477.1| NADH dehydrogenase subunit 2 (mitochondrion)...   142   4e-32
ref|YP_005090433.1| NADH dehydrogenase subunit 2 (mitochondrion)...   142   4e-32
dbj|BAD83439.2| NADH dehydrogenase subunit 2 (mitochondrion) [Ni...   142   4e-32
ref|NP_064064.2| nad2 gene product (mitochondrion) [Beta vulgari...   142   4e-32

>emb|CBX33211.1| NADH dehydrogenase subunit 2 (mitochondrion) [Beta vulgaris subsp.
           maritima] gi|384977889|emb|CBL54111.1| NADH
           dehydrogenase subunit 2 (mitochondrion) [Beta vulgaris
           subsp. maritima]
          Length = 488

 Score =  142 bits (357), Expect = 4e-32
 Identities = 69/71 (97%), Positives = 69/71 (97%)
 Frame = -3

Query: 215 VGVVTSVIGCFYYIRLVKRMFFDTPRTWILYEPMDRDKSLLLAMTSSFITLFFSYPSPLF 36
           VGVVTSVIGCFYYIRLVKRMFFDTPRTWILYEPMDRDKSLLLAMTSSFITLFF YPSPLF
Sbjct: 417 VGVVTSVIGCFYYIRLVKRMFFDTPRTWILYEPMDRDKSLLLAMTSSFITLFFLYPSPLF 476

Query: 35  SVTHQMALSSY 3
           SVTHQMALS Y
Sbjct: 477 SVTHQMALSLY 487


>ref|YP_005090477.1| NADH dehydrogenase subunit 2 (mitochondrion) [Lotus japonicus]
           gi|357197341|gb|AET62937.1| NADH dehydrogenase subunit 2
           (mitochondrion) [Lotus japonicus]
          Length = 488

 Score =  142 bits (357), Expect = 4e-32
 Identities = 69/71 (97%), Positives = 69/71 (97%)
 Frame = -3

Query: 215 VGVVTSVIGCFYYIRLVKRMFFDTPRTWILYEPMDRDKSLLLAMTSSFITLFFSYPSPLF 36
           VGVVTSVIGCFYYIRLVKRMFFDTPRTWILYEPMDRDKSLLLAMTSSFITLFF YPSPLF
Sbjct: 417 VGVVTSVIGCFYYIRLVKRMFFDTPRTWILYEPMDRDKSLLLAMTSSFITLFFLYPSPLF 476

Query: 35  SVTHQMALSSY 3
           SVTHQMALS Y
Sbjct: 477 SVTHQMALSLY 487


>ref|YP_005090433.1| NADH dehydrogenase subunit 2 (mitochondrion) [Millettia pinnata]
           gi|357197296|gb|AET62893.1| NADH dehydrogenase subunit 2
           (mitochondrion) [Millettia pinnata]
          Length = 488

 Score =  142 bits (357), Expect = 4e-32
 Identities = 69/71 (97%), Positives = 69/71 (97%)
 Frame = -3

Query: 215 VGVVTSVIGCFYYIRLVKRMFFDTPRTWILYEPMDRDKSLLLAMTSSFITLFFSYPSPLF 36
           VGVVTSVIGCFYYIRLVKRMFFDTPRTWILYEPMDRDKSLLLAMTSSFITLFF YPSPLF
Sbjct: 417 VGVVTSVIGCFYYIRLVKRMFFDTPRTWILYEPMDRDKSLLLAMTSSFITLFFLYPSPLF 476

Query: 35  SVTHQMALSSY 3
           SVTHQMALS Y
Sbjct: 477 SVTHQMALSLY 487


>dbj|BAD83439.2| NADH dehydrogenase subunit 2 (mitochondrion) [Nicotiana tabacum]
          Length = 488

 Score =  142 bits (357), Expect = 4e-32
 Identities = 69/71 (97%), Positives = 69/71 (97%)
 Frame = -3

Query: 215 VGVVTSVIGCFYYIRLVKRMFFDTPRTWILYEPMDRDKSLLLAMTSSFITLFFSYPSPLF 36
           VGVVTSVIGCFYYIRLVKRMFFDTPRTWILYEPMDRDKSLLLAMTSSFITLFF YPSPLF
Sbjct: 417 VGVVTSVIGCFYYIRLVKRMFFDTPRTWILYEPMDRDKSLLLAMTSSFITLFFLYPSPLF 476

Query: 35  SVTHQMALSSY 3
           SVTHQMALS Y
Sbjct: 477 SVTHQMALSLY 487


>ref|NP_064064.2| nad2 gene product (mitochondrion) [Beta vulgaris subsp. vulgaris]
           gi|323435024|ref|YP_004222260.1| NADH dehydrogenase
           subunit 2 [Beta vulgaris subsp. maritima]
           gi|346683118|ref|YP_004842067.1| NADH dehydrogenase
           subunit 2 [Beta macrocarpa] gi|87248033|gb|ABD36071.1|
           NADH dehydrogenase subunit 2 [Beta vulgaris subsp.
           vulgaris] gi|157153896|dbj|BAA99456.2| NADH
           dehydrogenase subunit 2 [Beta vulgaris subsp. vulgaris]
           gi|317905581|emb|CBJ13993.1| NADH dehydrogenase subunit
           2 [Beta vulgaris subsp. maritima]
           gi|319439757|emb|CBJ17481.1| NADH dehydrogenase subunit
           2 [Beta vulgaris subsp. maritima]
           gi|320147994|emb|CBJ20660.1| NADH dehydrogenase subunit
           2 [Beta vulgaris subsp. maritima]
           gi|345500036|emb|CBX24852.1| NADH dehydrogenase subunit
           2 [Beta macrocarpa]
          Length = 488

 Score =  142 bits (357), Expect = 4e-32
 Identities = 69/71 (97%), Positives = 69/71 (97%)
 Frame = -3

Query: 215 VGVVTSVIGCFYYIRLVKRMFFDTPRTWILYEPMDRDKSLLLAMTSSFITLFFSYPSPLF 36
           VGVVTSVIGCFYYIRLVKRMFFDTPRTWILYEPMDRDKSLLLAMTSSFITLFF YPSPLF
Sbjct: 417 VGVVTSVIGCFYYIRLVKRMFFDTPRTWILYEPMDRDKSLLLAMTSSFITLFFLYPSPLF 476

Query: 35  SVTHQMALSSY 3
           SVTHQMALS Y
Sbjct: 477 SVTHQMALSLY 487


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