BLASTX nr result

ID: Coptis24_contig00026836 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00026836
         (831 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634469.1| PREDICTED: uncharacterized protein LOC100257...   107   3e-21
ref|XP_002284291.2| PREDICTED: uncharacterized protein LOC100257...   107   3e-21
ref|XP_004158541.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...   104   2e-20
ref|XP_004138809.1| PREDICTED: uncharacterized protein LOC101216...   104   2e-20
ref|XP_002438092.1| hypothetical protein SORBIDRAFT_10g007910 [S...    99   1e-18

>ref|XP_003634469.1| PREDICTED: uncharacterized protein LOC100257505 isoform 2 [Vitis
           vinifera]
          Length = 595

 Score =  107 bits (267), Expect = 3e-21
 Identities = 53/99 (53%), Positives = 72/99 (72%)
 Frame = +1

Query: 532 DDQTTEITEAKAESPEGKFRSLEEIISEEKAVEPIFDGTEVPEPEATGVSSTRSSDLEPE 711
           ++Q  E  E ++E+    ++ ++E +SEEK  EP+FDGTE+P  EA+   STR  DL+ E
Sbjct: 7   NNQVDESKELESENKSETYQDIKENLSEEKEPEPVFDGTEIPGMEASRSMSTRPLDLDTE 66

Query: 712 AQGYAWPDKAVALKNFVREKSVVAVSTVIRRLSGKKDED 828
            QG AWP+KAVALKNFV+EK  VAVS+V+R LSGK +ED
Sbjct: 67  TQGSAWPEKAVALKNFVKEKGTVAVSSVLRVLSGKTEED 105


>ref|XP_002284291.2| PREDICTED: uncharacterized protein LOC100257505 isoform 1 [Vitis
           vinifera]
          Length = 649

 Score =  107 bits (267), Expect = 3e-21
 Identities = 53/99 (53%), Positives = 72/99 (72%)
 Frame = +1

Query: 532 DDQTTEITEAKAESPEGKFRSLEEIISEEKAVEPIFDGTEVPEPEATGVSSTRSSDLEPE 711
           ++Q  E  E ++E+    ++ ++E +SEEK  EP+FDGTE+P  EA+   STR  DL+ E
Sbjct: 7   NNQVDESKELESENKSETYQDIKENLSEEKEPEPVFDGTEIPGMEASRSMSTRPLDLDTE 66

Query: 712 AQGYAWPDKAVALKNFVREKSVVAVSTVIRRLSGKKDED 828
            QG AWP+KAVALKNFV+EK  VAVS+V+R LSGK +ED
Sbjct: 67  TQGSAWPEKAVALKNFVKEKGTVAVSSVLRVLSGKTEED 105


>ref|XP_004158541.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized LOC101216716
           [Cucumis sativus]
          Length = 753

 Score =  104 bits (260), Expect = 2e-20
 Identities = 72/214 (33%), Positives = 107/214 (50%)
 Frame = +1

Query: 187 SSDNDDLQIEGEVLQQVELLNENDLHSEGKVPSAVQSSTSNDHEREDQGQVPSAIQSLNK 366
           S  ND  +   E+ Q + +  ++   ++ +    V    +ND + E Q +        ++
Sbjct: 16  SKQNDGGESTVEIEQPLSVSGDSATQAKDQGLDEVVKDKNNDSKCEAQEETVEREIVQSE 75

Query: 367 NDLHSEGKVSSAIESLDNSDFQQEDKGELHSEMPXXXXXXXXXXXXXXGLGEQCGDDQTT 546
            D   E K+          DFQ + +GE   ++                  E   DD   
Sbjct: 76  VDHEVEAKL----------DFQSKSEGEKSDQIISNGDSNEKLDEDKNVESESSSDDSDN 125

Query: 547 EITEAKAESPEGKFRSLEEIISEEKAVEPIFDGTEVPEPEATGVSSTRSSDLEPEAQGYA 726
           ++  +KA+   G  +   E+I EEK+ EP+FDGTEVP  E +G  S RS D + E+QG  
Sbjct: 126 DVVGSKAQI--GSNQPTGEVIGEEKSPEPVFDGTEVPGIEGSGSLSNRSMDSDTESQGVV 183

Query: 727 WPDKAVALKNFVREKSVVAVSTVIRRLSGKKDED 828
             D+A+ALKNFV+EK VVAVSTV+RR SGKKDE+
Sbjct: 184 --DRALALKNFVKEKGVVAVSTVLRRFSGKKDEE 215


>ref|XP_004138809.1| PREDICTED: uncharacterized protein LOC101216716 [Cucumis sativus]
          Length = 753

 Score =  104 bits (260), Expect = 2e-20
 Identities = 72/214 (33%), Positives = 107/214 (50%)
 Frame = +1

Query: 187 SSDNDDLQIEGEVLQQVELLNENDLHSEGKVPSAVQSSTSNDHEREDQGQVPSAIQSLNK 366
           S  ND  +   E+ Q + +  ++   ++ +    V    +ND + E Q +        ++
Sbjct: 16  SKQNDGGESTVEIEQPLSVSGDSATQAKDQGLDEVVKDKNNDSKCEAQEETVEREIVQSE 75

Query: 367 NDLHSEGKVSSAIESLDNSDFQQEDKGELHSEMPXXXXXXXXXXXXXXGLGEQCGDDQTT 546
            D   E K+          DFQ + +GE   ++                  E   DD   
Sbjct: 76  VDHEVEAKL----------DFQSKSEGEKSDQIISNGDSNEKLDEDKNVESESSSDDSDN 125

Query: 547 EITEAKAESPEGKFRSLEEIISEEKAVEPIFDGTEVPEPEATGVSSTRSSDLEPEAQGYA 726
           ++  +KA+   G  +   E+I EEK+ EP+FDGTEVP  E +G  S RS D + E+QG  
Sbjct: 126 DVVGSKAQI--GSNQPTGEVIGEEKSPEPVFDGTEVPGIEGSGSLSNRSMDSDTESQGVV 183

Query: 727 WPDKAVALKNFVREKSVVAVSTVIRRLSGKKDED 828
             D+A+ALKNFV+EK VVAVSTV+RR SGKKDE+
Sbjct: 184 --DRALALKNFVKEKGVVAVSTVLRRFSGKKDEE 215


>ref|XP_002438092.1| hypothetical protein SORBIDRAFT_10g007910 [Sorghum bicolor]
           gi|241916315|gb|EER89459.1| hypothetical protein
           SORBIDRAFT_10g007910 [Sorghum bicolor]
          Length = 712

 Score = 99.0 bits (245), Expect = 1e-18
 Identities = 66/188 (35%), Positives = 99/188 (52%)
 Frame = +1

Query: 268 EGKVPSAVQSSTSNDHEREDQGQVPSAIQSLNKNDLHSEGKVSSAIESLDNSDFQQEDKG 447
           + K    ++ +++     ED+G      + LN    +S        + L+N    Q  +G
Sbjct: 7   DDKTIPVIEEASNPGQNCEDEGDWSRKTEMLNVEAPNSSN------DKLNNESEVQIQEG 60

Query: 448 ELHSEMPXXXXXXXXXXXXXXGLGEQCGDDQTTEITEAKAESPEGKFRSLEEIISEEKAV 627
           +  SE                GL  Q  +  ++++ E  + +   K     EI+ E+K+ 
Sbjct: 61  DDDSEK---------------GLNGQMNERTSSDVLEYASSNEITK-----EILPEDKSE 100

Query: 628 EPIFDGTEVPEPEATGVSSTRSSDLEPEAQGYAWPDKAVALKNFVREKSVVAVSTVIRRL 807
           EP+FDGTEVPE E    SS +S +L+ EAQG    D+AVA+KNFV+EKS +AVST +RRL
Sbjct: 101 EPVFDGTEVPEIEEMRRSSNQSVELDSEAQGSVLNDRAVAIKNFVKEKSAIAVSTFMRRL 160

Query: 808 SGKKDEDE 831
           SGKKDE+E
Sbjct: 161 SGKKDENE 168


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