BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00026818
         (231 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI24272.3| unnamed protein product [Vitis vinifera]              134   6e-30
ref|XP_002265253.1| PREDICTED: pentatricopeptide repeat-containi...   134   6e-30
emb|CAN73397.1| hypothetical protein VITISV_016435 [Vitis vinifera]   134   6e-30
ref|XP_002263650.1| PREDICTED: pentatricopeptide repeat-containi...    74   9e-12
emb|CBI28135.3| unnamed protein product [Vitis vinifera]               71   1e-10

>emb|CBI24272.3| unnamed protein product [Vitis vinifera]
          Length = 729

 Score =  134 bits (338), Expect = 6e-30
 Identities = 60/75 (80%), Positives = 69/75 (92%)
 Frame = -1

Query: 231 RNVFSWTSIIGLYCEVGDYEETIELFYLMIKEGVLPDRFIFPKVYKACSELKNYRVGRDV 52
           RNVFSWT+I+ +YC +GDYEETI+LFYLM+ EGV PD F+FPKV+KACSELKNYRVG+DV
Sbjct: 74  RNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDV 133

Query: 51  YDYMLSIGFEGNSFV 7
           YDYMLSIGFEGNS V
Sbjct: 134 YDYMLSIGFEGNSCV 148


>ref|XP_002265253.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Vitis vinifera]
          Length = 972

 Score =  134 bits (338), Expect = 6e-30
 Identities = 60/75 (80%), Positives = 69/75 (92%)
 Frame = -1

Query: 231 RNVFSWTSIIGLYCEVGDYEETIELFYLMIKEGVLPDRFIFPKVYKACSELKNYRVGRDV 52
           RNVFSWT+I+ +YC +GDYEETI+LFYLM+ EGV PD F+FPKV+KACSELKNYRVG+DV
Sbjct: 153 RNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDV 212

Query: 51  YDYMLSIGFEGNSFV 7
           YDYMLSIGFEGNS V
Sbjct: 213 YDYMLSIGFEGNSCV 227


>emb|CAN73397.1| hypothetical protein VITISV_016435 [Vitis vinifera]
          Length = 929

 Score =  134 bits (338), Expect = 6e-30
 Identities = 60/75 (80%), Positives = 69/75 (92%)
 Frame = -1

Query: 231 RNVFSWTSIIGLYCEVGDYEETIELFYLMIKEGVLPDRFIFPKVYKACSELKNYRVGRDV 52
           RNVFSWT+I+ +YC +GDYEETI+LFYLM+ EGV PD F+FPKV+KACSELKNYRVG+DV
Sbjct: 153 RNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDV 212

Query: 51  YDYMLSIGFEGNSFV 7
           YDYMLSIGFEGNS V
Sbjct: 213 YDYMLSIGFEGNSCV 227


>ref|XP_002263650.1| PREDICTED: pentatricopeptide repeat-containing protein At4g25270,
           chloroplastic [Vitis vinifera]
           gi|296084180|emb|CBI24568.3| unnamed protein product
           [Vitis vinifera]
          Length = 516

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 32/75 (42%), Positives = 51/75 (68%)
 Frame = -1

Query: 231 RNVFSWTSIIGLYCEVGDYEETIELFYLMIKEGVLPDRFIFPKVYKACSELKNYRVGRDV 52
           R+ F+W S+I  Y E+G YE+ + L++ M +EGV+PDRF FP+V KAC  + +  VG +V
Sbjct: 145 RSAFAWNSLISGYAELGLYEDAMALYFQMEEEGVVPDRFTFPRVLKACGGIGSISVGEEV 204

Query: 51  YDYMLSIGFEGNSFV 7
           + +++  GF  + FV
Sbjct: 205 HRHVVRCGFADDGFV 219


>emb|CBI28135.3| unnamed protein product [Vitis vinifera]
          Length = 1974

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 33/76 (43%), Positives = 47/76 (61%)
 Frame = -1

Query: 231  RNVFSWTSIIGLYCEVGDYEETIELFYLMIKEGVLPDRFIFPKVYKACSELKNYRVGRDV 52
            RNVFSW +I+GL C +G  E+ +  F  M + GV PD F+ P V KAC  L+   +G+ V
Sbjct: 1240 RNVFSWAAIVGLQCRMGFSEDALLGFIEMQENGVFPDNFVLPNVLKACGSLQLIGLGKGV 1299

Query: 51   YDYMLSIGFEGNSFVN 4
            + Y+L +GF    FV+
Sbjct: 1300 HGYVLKMGFGACVFVS 1315