BLASTX nr result

ID: Coptis24_contig00026792 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00026792
         (484 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI24240.3| unnamed protein product [Vitis vinifera]              219   1e-55
ref|XP_002280122.1| PREDICTED: uncharacterized protein LOC100255...   219   1e-55
gb|ABK94152.1| unknown [Populus trichocarpa]                          213   1e-53
ref|XP_004139129.1| PREDICTED: uncharacterized protein LOC101217...   208   3e-52
gb|AFK49442.1| unknown [Lotus japonicus]                              207   9e-52

>emb|CBI24240.3| unnamed protein product [Vitis vinifera]
          Length = 357

 Score =  219 bits (559), Expect = 1e-55
 Identities = 107/130 (82%), Positives = 118/130 (90%), Gaps = 1/130 (0%)
 Frame = +1

Query: 97  MESFGGTTEFNYNPNSGVDGED-EFSGLLEIYVHHARNIQNICIYEKQDVYAKFSLTYSP 273
           M+S+  TT F YNPNS  DGED EFSG+LEI+VHHARNI NICIY+ QDVYAKFSLTY+P
Sbjct: 1   MDSYNRTTGFCYNPNSDGDGEDAEFSGILEIFVHHARNIHNICIYDNQDVYAKFSLTYNP 60

Query: 274 DETISTRIINGGGKNPDFNENLRMKINQLDAVLKCEIWMLSRARNYLEDQLLGFALVPMS 453
           DET+STRIINGGGKNP+FNENL MKI QLD+VLKCEIWMLSRARN+LEDQLLGFALVP+S
Sbjct: 61  DETLSTRIINGGGKNPEFNENLIMKITQLDSVLKCEIWMLSRARNFLEDQLLGFALVPIS 120

Query: 454 LVAGKGKVTQ 483
           LV GKGKVTQ
Sbjct: 121 LVVGKGKVTQ 130


>ref|XP_002280122.1| PREDICTED: uncharacterized protein LOC100255166 [Vitis vinifera]
          Length = 444

 Score =  219 bits (559), Expect = 1e-55
 Identities = 107/130 (82%), Positives = 118/130 (90%), Gaps = 1/130 (0%)
 Frame = +1

Query: 97  MESFGGTTEFNYNPNSGVDGED-EFSGLLEIYVHHARNIQNICIYEKQDVYAKFSLTYSP 273
           M+S+  TT F YNPNS  DGED EFSG+LEI+VHHARNI NICIY+ QDVYAKFSLTY+P
Sbjct: 1   MDSYNRTTGFCYNPNSDGDGEDAEFSGILEIFVHHARNIHNICIYDNQDVYAKFSLTYNP 60

Query: 274 DETISTRIINGGGKNPDFNENLRMKINQLDAVLKCEIWMLSRARNYLEDQLLGFALVPMS 453
           DET+STRIINGGGKNP+FNENL MKI QLD+VLKCEIWMLSRARN+LEDQLLGFALVP+S
Sbjct: 61  DETLSTRIINGGGKNPEFNENLIMKITQLDSVLKCEIWMLSRARNFLEDQLLGFALVPIS 120

Query: 454 LVAGKGKVTQ 483
           LV GKGKVTQ
Sbjct: 121 LVVGKGKVTQ 130


>gb|ABK94152.1| unknown [Populus trichocarpa]
          Length = 438

 Score =  213 bits (542), Expect = 1e-53
 Identities = 103/133 (77%), Positives = 115/133 (86%), Gaps = 4/133 (3%)
 Frame = +1

Query: 97  MESFGGTTEFNYNPNSGV----DGEDEFSGLLEIYVHHARNIQNICIYEKQDVYAKFSLT 264
           M+SF  +T F YNPNS      DG+ EF G+LEIYVHHARNI NICIY+ QDVYAKFSLT
Sbjct: 1   MDSFNQSTGFRYNPNSNTMGDADGDSEFCGILEIYVHHARNIHNICIYDNQDVYAKFSLT 60

Query: 265 YSPDETISTRIINGGGKNPDFNENLRMKINQLDAVLKCEIWMLSRARNYLEDQLLGFALV 444
           Y+PDET+STRIIN GGKNP+FNENL MK+ QLDAVLKCEIWMLSRARNY+EDQLLGFALV
Sbjct: 61  YNPDETLSTRIINRGGKNPEFNENLMMKLAQLDAVLKCEIWMLSRARNYMEDQLLGFALV 120

Query: 445 PMSLVAGKGKVTQ 483
           P+S V+GKGKVTQ
Sbjct: 121 PISQVSGKGKVTQ 133


>ref|XP_004139129.1| PREDICTED: uncharacterized protein LOC101217581 [Cucumis sativus]
          Length = 504

 Score =  208 bits (530), Expect = 3e-52
 Identities = 99/129 (76%), Positives = 112/129 (86%)
 Frame = +1

Query: 97  MESFGGTTEFNYNPNSGVDGEDEFSGLLEIYVHHARNIQNICIYEKQDVYAKFSLTYSPD 276
           M+SF G + F Y+ NS    + + SGLLEIYVHHARNI NICIYE QDVYAKFSLTY+PD
Sbjct: 56  MDSFDGISVFGYDVNSSNMDDSDSSGLLEIYVHHARNIHNICIYENQDVYAKFSLTYNPD 115

Query: 277 ETISTRIINGGGKNPDFNENLRMKINQLDAVLKCEIWMLSRARNYLEDQLLGFALVPMSL 456
           +T+STR+INGGGKNPDFNENLRMK+ Q D+VLKCEIWMLSRARNYLEDQLLGFALVP+S 
Sbjct: 116 QTLSTRVINGGGKNPDFNENLRMKVTQPDSVLKCEIWMLSRARNYLEDQLLGFALVPLSQ 175

Query: 457 VAGKGKVTQ 483
           V GKGKVT+
Sbjct: 176 VVGKGKVTE 184


>gb|AFK49442.1| unknown [Lotus japonicus]
          Length = 388

 Score =  207 bits (526), Expect = 9e-52
 Identities = 103/137 (75%), Positives = 115/137 (83%), Gaps = 8/137 (5%)
 Frame = +1

Query: 97  MESFGG---TTEFNYNPNS-----GVDGEDEFSGLLEIYVHHARNIQNICIYEKQDVYAK 252
           MESF     TT F YNPNS     G D + EFSG L+IYVHHA+NI NICIY+ QDVYAK
Sbjct: 1   MESFNPSHQTTSFRYNPNSNRMNHGDDDDAEFSGFLDIYVHHAKNIHNICIYDNQDVYAK 60

Query: 253 FSLTYSPDETISTRIINGGGKNPDFNENLRMKINQLDAVLKCEIWMLSRARNYLEDQLLG 432
           FSLTYSPDET+STRIINGGGKNP FNENLR+KINQ+DAVLKCEIWM SR+RN+LEDQLLG
Sbjct: 61  FSLTYSPDETLSTRIINGGGKNPVFNENLRVKINQMDAVLKCEIWMFSRSRNHLEDQLLG 120

Query: 433 FALVPMSLVAGKGKVTQ 483
           FALVP+S + GKGKVT+
Sbjct: 121 FALVPVSKMVGKGKVTE 137


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