BLASTX nr result

ID: Coptis24_contig00026754 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00026754
         (219 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002312461.1| predicted protein [Populus trichocarpa] gi|2...    98   4e-19
ref|XP_002314784.1| predicted protein [Populus trichocarpa] gi|2...    96   9e-19
ref|XP_002525997.1| conserved hypothetical protein [Ricinus comm...    97   2e-18
ref|XP_002284995.1| PREDICTED: protein VAC14 homolog [Vitis vini...    94   2e-18
emb|CAN65293.1| hypothetical protein VITISV_014540 [Vitis vinifera]    94   2e-18

>ref|XP_002312461.1| predicted protein [Populus trichocarpa] gi|222852281|gb|EEE89828.1|
           predicted protein [Populus trichocarpa]
          Length = 725

 Score = 98.2 bits (243), Expect(2) = 4e-19
 Identities = 51/59 (86%), Positives = 52/59 (88%)
 Frame = +1

Query: 43  QLVVFLVHKFPVDHSLLEKCGALIIHRLCVLLDAERVYLELSTIFEGEADLDFASIMVQ 219
           QLVVFLVH F  DHSLLEK GALII RLCVLLDAER+Y ELSTI EGEADLDFASIMVQ
Sbjct: 413 QLVVFLVHNFRNDHSLLEKRGALIIRRLCVLLDAERIYRELSTILEGEADLDFASIMVQ 471



 Score = 21.2 bits (43), Expect(2) = 4e-19
 Identities = 7/9 (77%), Positives = 9/9 (100%)
 Frame = +2

Query: 2   DVHACIARD 28
           +VHACIA+D
Sbjct: 399 EVHACIAKD 407


>ref|XP_002314784.1| predicted protein [Populus trichocarpa] gi|222863824|gb|EEF00955.1|
           predicted protein [Populus trichocarpa]
          Length = 724

 Score = 96.3 bits (238), Expect(2) = 9e-19
 Identities = 49/59 (83%), Positives = 52/59 (88%)
 Frame = +1

Query: 43  QLVVFLVHKFPVDHSLLEKCGALIIHRLCVLLDAERVYLELSTIFEGEADLDFASIMVQ 219
           QL+VFLVH F ++HSLLEK G LII RLCVLLDAERVY ELSTI EGEADLDFASIMVQ
Sbjct: 413 QLLVFLVHNFRINHSLLEKRGTLIIRRLCVLLDAERVYRELSTILEGEADLDFASIMVQ 471



 Score = 21.9 bits (45), Expect(2) = 9e-19
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +2

Query: 2   DVHACIARDAPQSANLL 52
           +VHACIA+D      LL
Sbjct: 399 EVHACIAKDLQHFHQLL 415


>ref|XP_002525997.1| conserved hypothetical protein [Ricinus communis]
           gi|223534729|gb|EEF36421.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 728

 Score = 96.7 bits (239), Expect(2) = 2e-18
 Identities = 51/59 (86%), Positives = 52/59 (88%)
 Frame = +1

Query: 43  QLVVFLVHKFPVDHSLLEKCGALIIHRLCVLLDAERVYLELSTIFEGEADLDFASIMVQ 219
           QLVVFLVH F +D SLLEK GALII RLCVLLDAERVY ELSTI EGEADLDFASIMVQ
Sbjct: 415 QLVVFLVHNFRIDISLLEKRGALIIRRLCVLLDAERVYRELSTILEGEADLDFASIMVQ 473



 Score = 20.8 bits (42), Expect(2) = 2e-18
 Identities = 6/9 (66%), Positives = 9/9 (100%)
 Frame = +2

Query: 2   DVHACIARD 28
           ++HACIA+D
Sbjct: 401 EIHACIAKD 409


>ref|XP_002284995.1| PREDICTED: protein VAC14 homolog [Vitis vinifera]
           gi|297737634|emb|CBI26835.3| unnamed protein product
           [Vitis vinifera]
          Length = 727

 Score = 94.4 bits (233), Expect(2) = 2e-18
 Identities = 50/58 (86%), Positives = 51/58 (87%)
 Frame = +1

Query: 46  LVVFLVHKFPVDHSLLEKCGALIIHRLCVLLDAERVYLELSTIFEGEADLDFASIMVQ 219
           LVVFLVH F VD+SLLEK GALII RLCVLLDAERVY ELS I EGEADLDFASIMVQ
Sbjct: 415 LVVFLVHNFRVDNSLLEKRGALIIRRLCVLLDAERVYRELSMILEGEADLDFASIMVQ 472



 Score = 23.1 bits (48), Expect(2) = 2e-18
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = +2

Query: 2   DVHACIARDAPQSANLL 52
           DVHACIA+D     +L+
Sbjct: 400 DVHACIAKDPQHFRHLV 416


>emb|CAN65293.1| hypothetical protein VITISV_014540 [Vitis vinifera]
          Length = 727

 Score = 94.4 bits (233), Expect(2) = 2e-18
 Identities = 50/58 (86%), Positives = 51/58 (87%)
 Frame = +1

Query: 46  LVVFLVHKFPVDHSLLEKCGALIIHRLCVLLDAERVYLELSTIFEGEADLDFASIMVQ 219
           LVVFLVH F VD+SLLEK GALII RLCVLLDAERVY ELS I EGEADLDFASIMVQ
Sbjct: 415 LVVFLVHNFRVDNSLLEKRGALIIRRLCVLLDAERVYRELSMILEGEADLDFASIMVQ 472



 Score = 23.1 bits (48), Expect(2) = 2e-18
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = +2

Query: 2   DVHACIARDAPQSANLL 52
           DVHACIA+D     +L+
Sbjct: 400 DVHACIAKDPQHFRHLV 416


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