BLASTX nr result

ID: Coptis24_contig00026724 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00026724
         (421 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272758.2| PREDICTED: DUF246 domain-containing protein ...   159   2e-37
ref|XP_004141562.1| PREDICTED: DUF246 domain-containing protein ...   146   2e-33
ref|XP_003522604.1| PREDICTED: DUF246 domain-containing protein ...   144   8e-33
ref|XP_003526401.1| PREDICTED: DUF246 domain-containing protein ...   141   6e-32
ref|XP_002325978.1| predicted protein [Populus trichocarpa] gi|2...   140   1e-31

>ref|XP_002272758.2| PREDICTED: DUF246 domain-containing protein At1g04910-like [Vitis
           vinifera]
          Length = 582

 Score =  159 bits (403), Expect = 2e-37
 Identities = 80/140 (57%), Positives = 102/140 (72%)
 Frame = -1

Query: 421 LFSFTEGLLYFLVSTVFRRRGVLLFAPLLYISGMLMYMGTLTLEGSVNGVRGPSSQPPLL 242
           L SF E +++  VS VFRRRG+LLFAP+LYISGML+YMG+L+ +G   G  G  ++    
Sbjct: 54  LHSFVERVMFVFVSAVFRRRGLLLFAPVLYISGMLLYMGSLSFDGGGGGGGGGGAEAQPP 113

Query: 241 GSLYRTPQVFENLWPFMQNDGVGNTSNALMTAWNPKLRQSWKPCVNWSNSLTGFSEVRGS 62
           GS+YR+P+VFE LW FM+ +    + NALMT W+PK  QSWKPCVN   S    +E+  S
Sbjct: 114 GSVYRSPEVFEKLWAFMEGES-NRSHNALMTVWHPKPHQSWKPCVNQRISA---AELPKS 169

Query: 61  NGFFIIEANGGLNQQRISIC 2
           NG+FIIEANGGLNQQR+SIC
Sbjct: 170 NGYFIIEANGGLNQQRLSIC 189


>ref|XP_004141562.1| PREDICTED: DUF246 domain-containing protein At1g04910-like [Cucumis
           sativus] gi|449506825|ref|XP_004162859.1| PREDICTED:
           DUF246 domain-containing protein At1g04910-like [Cucumis
           sativus]
          Length = 573

 Score =  146 bits (368), Expect = 2e-33
 Identities = 74/143 (51%), Positives = 101/143 (70%), Gaps = 5/143 (3%)
 Frame = -1

Query: 415 SFTEGLLYFLVSTVFRRRGVLLFAPLLYISGMLMYMGTLTLEGSVNGVRG-----PSSQP 251
           S  E L++ ++S VFRR+G+LLFAPLLYIS ML+YMG+L  + S++ ++          P
Sbjct: 51  SIMEKLVFLILSAVFRRKGLLLFAPLLYISMMLLYMGSLNFDVSISNLKTRVVSVSKRAP 110

Query: 250 PLLGSLYRTPQVFENLWPFMQNDGVGNTSNALMTAWNPKLRQSWKPCVNWSNSLTGFSEV 71
           P  G++YR+PQVFE LWPFM+ +   +T++AL TAWN K+   WKPC++ S      +E+
Sbjct: 111 P--GTVYRSPQVFEKLWPFMEAESRNSTTHALSTAWNSKVHHVWKPCISSST----VTEL 164

Query: 70  RGSNGFFIIEANGGLNQQRISIC 2
             SNGF IIEANGGLNQQR+SIC
Sbjct: 165 PKSNGFLIIEANGGLNQQRLSIC 187


>ref|XP_003522604.1| PREDICTED: DUF246 domain-containing protein At1g04910-like [Glycine
           max]
          Length = 683

 Score =  144 bits (363), Expect = 8e-33
 Identities = 79/137 (57%), Positives = 97/137 (70%), Gaps = 2/137 (1%)
 Frame = -1

Query: 406 EGLLYFLVSTVFRRRGVLLFAPLLYISGMLMYMGTLTLE--GSVNGVRGPSSQPPLLGSL 233
           E L++ L+S VFRRRG+LLFAPLLYISGML+YMG+L+++     NGV     + P  GS+
Sbjct: 157 EKLVFILMSAVFRRRGLLLFAPLLYISGMLLYMGSLSIDVVSIKNGVVLVHKRAP-PGSV 215

Query: 232 YRTPQVFENLWPFMQNDGVGNTSNALMTAWNPKLRQSWKPCVNWSNSLTGFSEVRGSNGF 53
           YR+PQ+F+NLWPFM+ D  G T N LM AW  K  + WKPC N S       E+  SNGF
Sbjct: 216 YRSPQLFQNLWPFMEADN-GTTLNVLMRAWTKKELREWKPCANRS---VPEIELPKSNGF 271

Query: 52  FIIEANGGLNQQRISIC 2
            IIEANGGLNQQR+SIC
Sbjct: 272 LIIEANGGLNQQRLSIC 288


>ref|XP_003526401.1| PREDICTED: DUF246 domain-containing protein At1g04910-like [Glycine
           max]
          Length = 566

 Score =  141 bits (355), Expect = 6e-32
 Identities = 78/137 (56%), Positives = 95/137 (69%), Gaps = 2/137 (1%)
 Frame = -1

Query: 406 EGLLYFLVSTVFRRRGVLLFAPLLYISGMLMYMGTLTLE--GSVNGVRGPSSQPPLLGSL 233
           E L++ L+S VFRRRG+LLFAPLLYISGML+YMG+L+ +     NGV     + P  GS+
Sbjct: 40  EKLVFILMSAVFRRRGLLLFAPLLYISGMLLYMGSLSFDVVSIKNGVVLVHKRAP-PGSV 98

Query: 232 YRTPQVFENLWPFMQNDGVGNTSNALMTAWNPKLRQSWKPCVNWSNSLTGFSEVRGSNGF 53
           YR+PQ+F+NLWP M+ D  G T N LM AW     + WKPC N S   T   E+  SNGF
Sbjct: 99  YRSPQLFQNLWPLMEADN-GTTLNVLMKAWTKNELREWKPCANASLPET---ELPKSNGF 154

Query: 52  FIIEANGGLNQQRISIC 2
            IIEANGGLNQQR+SIC
Sbjct: 155 LIIEANGGLNQQRLSIC 171


>ref|XP_002325978.1| predicted protein [Populus trichocarpa] gi|222862853|gb|EEF00360.1|
           predicted protein [Populus trichocarpa]
          Length = 584

 Score =  140 bits (353), Expect = 1e-31
 Identities = 74/139 (53%), Positives = 103/139 (74%), Gaps = 4/139 (2%)
 Frame = -1

Query: 406 EGLLYFLVSTVFRRRGVLLFAPLLYISGMLMYMGTLTLEGSV--NGVRGPSSQPPLLGSL 233
           E L++ +V+ V RRRG+LLFAPLLY++GM++YMG+L  + ++   GV      PP  G++
Sbjct: 65  ERLMFMVVTVVLRRRGLLLFAPLLYVAGMVLYMGSLNFDVNLKNGGVVVRKRAPP--GTV 122

Query: 232 YRTPQVFENLWPFMQNDGVGNTSNALMTAWNPKLRQSWKP--CVNWSNSLTGFSEVRGSN 59
           YR+P+VF+ LWP+M+ +  G + NALMTAW+PKLRQ+WKP    N+S+     +E+  SN
Sbjct: 123 YRSPKVFDKLWPYMEAENNG-SHNALMTAWDPKLRQAWKPSGISNYSD-----AELPESN 176

Query: 58  GFFIIEANGGLNQQRISIC 2
           GF IIEANGGLNQQR+SIC
Sbjct: 177 GFLIIEANGGLNQQRLSIC 195


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