BLASTX nr result

ID: Coptis24_contig00026683 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00026683
         (442 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002445504.1| hypothetical protein SORBIDRAFT_07g020600 [S...   202   3e-50
ref|XP_002448970.1| hypothetical protein SORBIDRAFT_05g002670 [S...   201   5e-50
ref|XP_002444604.1| hypothetical protein SORBIDRAFT_07g024540 [S...   197   1e-48
ref|XP_002446095.1| hypothetical protein SORBIDRAFT_06g001660 [S...   197   1e-48
ref|XP_002460012.1| hypothetical protein SORBIDRAFT_02g020820 [S...   197   1e-48

>ref|XP_002445504.1| hypothetical protein SORBIDRAFT_07g020600 [Sorghum bicolor]
           gi|241941854|gb|EES14999.1| hypothetical protein
           SORBIDRAFT_07g020600 [Sorghum bicolor]
          Length = 1028

 Score =  202 bits (513), Expect = 3e-50
 Identities = 93/145 (64%), Positives = 113/145 (77%)
 Frame = -3

Query: 440 PRDMHERYHDAMALVQKFGKPDIFLTMTCNPNWVDIKRRLLPGQLPQDRPELTTRVFREK 261
           PRDM  RY DAMALV++FGKPDIFLTMTCNPNW +IKR L PGQ+PQDRP+L  RVFR K
Sbjct: 9   PRDMRRRYMDAMALVRRFGKPDIFLTMTCNPNWDEIKRELYPGQMPQDRPDLVVRVFRAK 68

Query: 260 LEELKNDLFSVGVLGRVAAHVHVIEFQKRGLPHAHILLILDEADKLISPDDYDRVVRAEI 81
           L+ELK+ L    +LG+V AHV+V+EFQKRGLPHAH LLI+D   K+  P+ YDR++ AE+
Sbjct: 69  LQELKDRLLKKDILGKVRAHVYVVEFQKRGLPHAHFLLIMDRKYKITCPEQYDRLISAEL 128

Query: 80  PDPINEPDLYNIVVKHMIHGPWGSL 6
           P+    P LY +V KHM+HGP G L
Sbjct: 129 PNKKKYPVLYKMVTKHMMHGPCGVL 153


>ref|XP_002448970.1| hypothetical protein SORBIDRAFT_05g002670 [Sorghum bicolor]
           gi|241934813|gb|EES07958.1| hypothetical protein
           SORBIDRAFT_05g002670 [Sorghum bicolor]
          Length = 1193

 Score =  201 bits (511), Expect = 5e-50
 Identities = 93/145 (64%), Positives = 112/145 (77%)
 Frame = -3

Query: 440 PRDMHERYHDAMALVQKFGKPDIFLTMTCNPNWVDIKRRLLPGQLPQDRPELTTRVFREK 261
           PRDM  RY DAMALV++FGKPDIFLTMTCNPNW +IKR L PGQ PQDRP+L  RVFR K
Sbjct: 277 PRDMRRRYMDAMALVRRFGKPDIFLTMTCNPNWDEIKRELYPGQTPQDRPDLVVRVFRAK 336

Query: 260 LEELKNDLFSVGVLGRVAAHVHVIEFQKRGLPHAHILLILDEADKLISPDDYDRVVRAEI 81
           L+ELK+ L    +LG+V AHV+V+EFQKRGLPHAH LLI+D   K+  P+ YDR++ AE+
Sbjct: 337 LQELKDRLLKKNILGKVRAHVYVVEFQKRGLPHAHFLLIMDRKYKITCPEQYDRLISAEL 396

Query: 80  PDPINEPDLYNIVVKHMIHGPWGSL 6
           P+    P LY +V KHM+HGP G L
Sbjct: 397 PNKKKYPVLYKMVTKHMMHGPCGVL 421


>ref|XP_002444604.1| hypothetical protein SORBIDRAFT_07g024540 [Sorghum bicolor]
           gi|241940954|gb|EES14099.1| hypothetical protein
           SORBIDRAFT_07g024540 [Sorghum bicolor]
          Length = 1185

 Score =  197 bits (500), Expect = 1e-48
 Identities = 91/145 (62%), Positives = 111/145 (76%)
 Frame = -3

Query: 440 PRDMHERYHDAMALVQKFGKPDIFLTMTCNPNWVDIKRRLLPGQLPQDRPELTTRVFREK 261
           PRDM  RY DAMALV++FGKPDIFLTMTCNPNW +IKR L P Q+PQDRP+L  RVFR K
Sbjct: 268 PRDMRRRYMDAMALVRRFGKPDIFLTMTCNPNWDEIKRELYPVQMPQDRPDLVVRVFRAK 327

Query: 260 LEELKNDLFSVGVLGRVAAHVHVIEFQKRGLPHAHILLILDEADKLISPDDYDRVVRAEI 81
           L+ELK+ L    +LG+V AHV+V+EFQKRGLPHAH LLI+D   K+  P+ YDR++  E+
Sbjct: 328 LQELKDRLLKKDILGKVRAHVYVVEFQKRGLPHAHFLLIMDRKYKITCPEQYDRLISTEL 387

Query: 80  PDPINEPDLYNIVVKHMIHGPWGSL 6
           P+    P LY +V KHM+HGP G L
Sbjct: 388 PNKKKYPVLYKMVTKHMMHGPCGVL 412


>ref|XP_002446095.1| hypothetical protein SORBIDRAFT_06g001660 [Sorghum bicolor]
           gi|241937278|gb|EES10423.1| hypothetical protein
           SORBIDRAFT_06g001660 [Sorghum bicolor]
          Length = 1484

 Score =  197 bits (500), Expect = 1e-48
 Identities = 92/145 (63%), Positives = 110/145 (75%)
 Frame = -3

Query: 440 PRDMHERYHDAMALVQKFGKPDIFLTMTCNPNWVDIKRRLLPGQLPQDRPELTTRVFREK 261
           PRDM  RY DAMALV++FGKPDIFLTMTCNP W +I R L PGQ PQDRP+L  RVFR K
Sbjct: 468 PRDMRRRYMDAMALVRRFGKPDIFLTMTCNPKWDEITRELYPGQTPQDRPDLIDRVFRAK 527

Query: 260 LEELKNDLFSVGVLGRVAAHVHVIEFQKRGLPHAHILLILDEADKLISPDDYDRVVRAEI 81
           LEELK+ L    +LG+V AHV+V+EFQKRGLPHAH LLI+D   K+  P+ YD ++ AE+
Sbjct: 528 LEELKHMLLKKDILGKVRAHVYVVEFQKRGLPHAHFLLIMDRRYKITCPEQYDLLISAEL 587

Query: 80  PDPINEPDLYNIVVKHMIHGPWGSL 6
           P+    PDLY +V KHM+HGP G L
Sbjct: 588 PNKKKYPDLYKMVTKHMMHGPCGVL 612


>ref|XP_002460012.1| hypothetical protein SORBIDRAFT_02g020820 [Sorghum bicolor]
           gi|241923389|gb|EER96533.1| hypothetical protein
           SORBIDRAFT_02g020820 [Sorghum bicolor]
          Length = 1234

 Score =  197 bits (500), Expect = 1e-48
 Identities = 92/145 (63%), Positives = 110/145 (75%)
 Frame = -3

Query: 440 PRDMHERYHDAMALVQKFGKPDIFLTMTCNPNWVDIKRRLLPGQLPQDRPELTTRVFREK 261
           PRDM  RY DAMALV++FGKPDIFLTMTCNP W +I R L PGQ PQDRP+L  RVFR K
Sbjct: 244 PRDMRRRYMDAMALVRRFGKPDIFLTMTCNPKWDEITRELYPGQTPQDRPDLIDRVFRAK 303

Query: 260 LEELKNDLFSVGVLGRVAAHVHVIEFQKRGLPHAHILLILDEADKLISPDDYDRVVRAEI 81
           LEELK+ L    +LG+V AHV+V+EFQKRGLPHAH LLI+D   K+  P+ YD ++ AE+
Sbjct: 304 LEELKHVLLKKDILGKVRAHVYVVEFQKRGLPHAHFLLIMDRRYKITCPEQYDLLISAEL 363

Query: 80  PDPINEPDLYNIVVKHMIHGPWGSL 6
           P+    PDLY +V KHM+HGP G L
Sbjct: 364 PNKKKYPDLYKMVTKHMMHGPCGVL 388


Top