BLASTX nr result

ID: Coptis24_contig00026603 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00026603
         (399 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331254.1| predicted protein [Populus trichocarpa] gi|2...   117   8e-25
ref|XP_002525924.1| conserved hypothetical protein [Ricinus comm...   117   1e-24
ref|XP_004154727.1| PREDICTED: uncharacterized protein LOC101226...   114   1e-23
ref|XP_002330925.1| predicted protein [Populus trichocarpa] gi|2...   114   1e-23
ref|XP_002278111.1| PREDICTED: uncharacterized protein LOC100242...   113   2e-23

>ref|XP_002331254.1| predicted protein [Populus trichocarpa] gi|222873679|gb|EEF10810.1|
           predicted protein [Populus trichocarpa]
          Length = 797

 Score =  117 bits (294), Expect = 8e-25
 Identities = 56/79 (70%), Positives = 68/79 (86%)
 Frame = -3

Query: 262 SIAQPEAILEWLQKEMGYRPQVQFSSTSSNKTTATLPSIETLRKICRGNMVPIWSFLLQR 83
           ++AQPEAILEWLQKEMGYRP   +S+T+S    + LPSI+ +RKICRGNM+PIW FL++R
Sbjct: 7   AVAQPEAILEWLQKEMGYRPLGPYSATTSK---SQLPSIDAMRKICRGNMIPIWGFLVKR 63

Query: 82  VKSEKTVEKIRRNILVHGS 26
           VKSEKTVE IR+NILVHGS
Sbjct: 64  VKSEKTVENIRKNILVHGS 82


>ref|XP_002525924.1| conserved hypothetical protein [Ricinus communis]
           gi|223534753|gb|EEF36444.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 809

 Score =  117 bits (293), Expect = 1e-24
 Identities = 60/87 (68%), Positives = 74/87 (85%), Gaps = 1/87 (1%)
 Frame = -3

Query: 259 IAQPEAILEWLQKEMGYRPQVQFSSTSSNKTTATLPSIETLRKICRGNMVPIWSFLLQRV 80
           ++QPEAILEWLQKEMGYRP   +++ S+NK+   LPSI+ +RKICRGNM+PIWSFL++RV
Sbjct: 9   VSQPEAILEWLQKEMGYRPLGPYNA-STNKSQ--LPSIDAIRKICRGNMIPIWSFLIKRV 65

Query: 79  KSEKTVEKIRRNILVHGSSNN-ESENV 2
           KSEKTVE IR+NILVHGSS   ES N+
Sbjct: 66  KSEKTVESIRKNILVHGSSGGVESGNL 92


>ref|XP_004154727.1| PREDICTED: uncharacterized protein LOC101226721 [Cucumis sativus]
          Length = 800

 Score =  114 bits (284), Expect = 1e-23
 Identities = 52/86 (60%), Positives = 68/86 (79%)
 Frame = -3

Query: 262 SIAQPEAILEWLQKEMGYRPQVQFSSTSSNKTTATLPSIETLRKICRGNMVPIWSFLLQR 83
           S+AQPEAIL+WLQKEMGYRP   +S++S ++    LPS++  RK+CRGNM+PIW+FL+ R
Sbjct: 7   SMAQPEAILDWLQKEMGYRPLGSYSASSKSQ----LPSVDAFRKVCRGNMIPIWNFLITR 62

Query: 82  VKSEKTVEKIRRNILVHGSSNNESEN 5
           VKSEKTV+ IRRNI+VHG      E+
Sbjct: 63  VKSEKTVDNIRRNIMVHGGGGGAGES 88


>ref|XP_002330925.1| predicted protein [Populus trichocarpa] gi|222873119|gb|EEF10250.1|
           predicted protein [Populus trichocarpa]
          Length = 801

 Score =  114 bits (284), Expect = 1e-23
 Identities = 55/84 (65%), Positives = 66/84 (78%)
 Frame = -3

Query: 262 SIAQPEAILEWLQKEMGYRPQVQFSSTSSNKTTATLPSIETLRKICRGNMVPIWSFLLQR 83
           ++AQPEAILEWL KEMGYRP    S+ +S    + LPSI+ +RKICRGNM+PIW FL++R
Sbjct: 7   AVAQPEAILEWLHKEMGYRPLGPQSAATSK---SQLPSIDAIRKICRGNMIPIWGFLIKR 63

Query: 82  VKSEKTVEKIRRNILVHGSSNNES 11
           VKSEKTVE IR+NILVHG    ES
Sbjct: 64  VKSEKTVENIRKNILVHGGGGGES 87


>ref|XP_002278111.1| PREDICTED: uncharacterized protein LOC100242960 [Vitis vinifera]
          Length = 791

 Score =  113 bits (282), Expect = 2e-23
 Identities = 56/83 (67%), Positives = 69/83 (83%)
 Frame = -3

Query: 277 MQNPISIAQPEAILEWLQKEMGYRPQVQFSSTSSNKTTATLPSIETLRKICRGNMVPIWS 98
           MQ+ + +AQPEAILEWLQKEMGYRP   ++++S     A  PSI++LRKICRGNM+P+W+
Sbjct: 1   MQSSV-VAQPEAILEWLQKEMGYRPLGPYNASSK---AAASPSIDSLRKICRGNMIPVWN 56

Query: 97  FLLQRVKSEKTVEKIRRNILVHG 29
           FLL RVKSEKTVEKI+RNI VHG
Sbjct: 57  FLLNRVKSEKTVEKIQRNIHVHG 79


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