BLASTX nr result

ID: Coptis24_contig00026594 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00026594
         (723 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526580.1| Ran GTPase binding protein, putative [Ricinu...   214   1e-53
emb|CBI27342.3| unnamed protein product [Vitis vinifera]              208   8e-52
ref|XP_002267377.1| PREDICTED: uncharacterized protein LOC100253...   208   8e-52
emb|CAN82853.1| hypothetical protein VITISV_028768 [Vitis vinifera]   208   8e-52
ref|XP_002888466.1| hypothetical protein ARALYDRAFT_475695 [Arab...   196   5e-48

>ref|XP_002526580.1| Ran GTPase binding protein, putative [Ricinus communis]
           gi|223534074|gb|EEF35792.1| Ran GTPase binding protein,
           putative [Ricinus communis]
          Length = 1086

 Score =  214 bits (545), Expect = 1e-53
 Identities = 105/155 (67%), Positives = 124/155 (80%), Gaps = 2/155 (1%)
 Frame = -1

Query: 474 PSERRVEQAIVALKKGAQLLKYRRRGKPKFCPFRVSTDEKLLIWYSGKDEKHLMLDSITK 295
           P +R VEQAI+ALKKGA LLKY RRGKPKFCPFR+STDEK LIWYSG++EK L L S+ K
Sbjct: 15  PFDRTVEQAILALKKGAHLLKYGRRGKPKFCPFRLSTDEKYLIWYSGQEEKQLKLSSVMK 74

Query: 294 IIPG--TVNFQRQPEPGKESQSFSIISANGERSLDLICKDEAQAESWLVGLRAVVSKSHV 121
           I+ G  TVNFQRQ +P KE QSFS+I A GERSLDLICKD+AQA+SW +GLRAV+S+ H 
Sbjct: 75  IVTGQRTVNFQRQLQPDKEHQSFSLIYAKGERSLDLICKDKAQADSWFIGLRAVISRCHR 134

Query: 120 HKSYATMRSCRGAKSCINSPVGYSRRKRNLGLSED 16
            +    +RS R A+SC+NSP GY RRK NLG+ ED
Sbjct: 135 SRPLTALRSHRSAQSCVNSPAGYFRRKHNLGILED 169


>emb|CBI27342.3| unnamed protein product [Vitis vinifera]
          Length = 925

 Score =  208 bits (530), Expect = 8e-52
 Identities = 103/158 (65%), Positives = 124/158 (78%), Gaps = 2/158 (1%)
 Frame = -1

Query: 474 PSERRVEQAIVALKKGAQLLKYRRRGKPKFCPFRVSTDEKLLIWYSGKDEKHLMLDSITK 295
           P +R VEQAIV LKKGA LL+  RRGKPKFCPFR+STDEK LIWYSG++EK L L SITK
Sbjct: 10  PFDRAVEQAIVTLKKGAYLLRCGRRGKPKFCPFRLSTDEKFLIWYSGQEEKQLRLSSITK 69

Query: 294 IIPG--TVNFQRQPEPGKESQSFSIISANGERSLDLICKDEAQAESWLVGLRAVVSKSHV 121
           IIPG  TVNFQRQ +  +E +SFS++ ANGERSLDLICKD+AQA+SW +GL+AV+S+   
Sbjct: 70  IIPGQRTVNFQRQLQEERECRSFSLVYANGERSLDLICKDKAQADSWFLGLKAVISRCQH 129

Query: 120 HKSYATMRSCRGAKSCINSPVGYSRRKRNLGLSEDLTK 7
            +  +T R+C G ++C NSP GY RRK NLGL ED  K
Sbjct: 130 PRQLSTFRNCVGVQTCFNSPAGYFRRKHNLGLLEDTPK 167


>ref|XP_002267377.1| PREDICTED: uncharacterized protein LOC100253065 [Vitis vinifera]
          Length = 1023

 Score =  208 bits (530), Expect = 8e-52
 Identities = 103/158 (65%), Positives = 124/158 (78%), Gaps = 2/158 (1%)
 Frame = -1

Query: 474 PSERRVEQAIVALKKGAQLLKYRRRGKPKFCPFRVSTDEKLLIWYSGKDEKHLMLDSITK 295
           P +R VEQAIV LKKGA LL+  RRGKPKFCPFR+STDEK LIWYSG++EK L L SITK
Sbjct: 10  PFDRAVEQAIVTLKKGAYLLRCGRRGKPKFCPFRLSTDEKFLIWYSGQEEKQLRLSSITK 69

Query: 294 IIPG--TVNFQRQPEPGKESQSFSIISANGERSLDLICKDEAQAESWLVGLRAVVSKSHV 121
           IIPG  TVNFQRQ +  +E +SFS++ ANGERSLDLICKD+AQA+SW +GL+AV+S+   
Sbjct: 70  IIPGQRTVNFQRQLQEERECRSFSLVYANGERSLDLICKDKAQADSWFLGLKAVISRCQH 129

Query: 120 HKSYATMRSCRGAKSCINSPVGYSRRKRNLGLSEDLTK 7
            +  +T R+C G ++C NSP GY RRK NLGL ED  K
Sbjct: 130 PRQLSTFRNCVGVQTCFNSPAGYFRRKHNLGLLEDTPK 167


>emb|CAN82853.1| hypothetical protein VITISV_028768 [Vitis vinifera]
          Length = 1156

 Score =  208 bits (530), Expect = 8e-52
 Identities = 103/158 (65%), Positives = 124/158 (78%), Gaps = 2/158 (1%)
 Frame = -1

Query: 474 PSERRVEQAIVALKKGAQLLKYRRRGKPKFCPFRVSTDEKLLIWYSGKDEKHLMLDSITK 295
           P +R VEQAIV LKKGA LL+  RRGKPKFCPFR+STDEK LIWYSG++EK L L SITK
Sbjct: 10  PFDRAVEQAIVTLKKGAYLLRCGRRGKPKFCPFRLSTDEKFLIWYSGQEEKQLRLSSITK 69

Query: 294 IIPG--TVNFQRQPEPGKESQSFSIISANGERSLDLICKDEAQAESWLVGLRAVVSKSHV 121
           IIPG  TVNFQRQ +  +E +SFS++ ANGERSLDLICKD+AQA+SW +GL+AV+S+   
Sbjct: 70  IIPGQRTVNFQRQLQEERECRSFSLVYANGERSLDLICKDKAQADSWFLGLKAVISRCQH 129

Query: 120 HKSYATMRSCRGAKSCINSPVGYSRRKRNLGLSEDLTK 7
            +  +T R+C G ++C NSP GY RRK NLGL ED  K
Sbjct: 130 PRQLSTFRNCVGVQTCFNSPAGYFRRKHNLGLLEDTPK 167


>ref|XP_002888466.1| hypothetical protein ARALYDRAFT_475695 [Arabidopsis lyrata subsp.
           lyrata] gi|297334307|gb|EFH64725.1| hypothetical protein
           ARALYDRAFT_475695 [Arabidopsis lyrata subsp. lyrata]
          Length = 1005

 Score =  196 bits (497), Expect = 5e-48
 Identities = 98/162 (60%), Positives = 126/162 (77%), Gaps = 5/162 (3%)
 Frame = -1

Query: 474 PSERRVEQAIVALKKGAQLLKYRRRGKPKFCPFRVSTDEKLLIWYSGKDEKHLMLDSITK 295
           P +R  EQAI+ALKKGAQLLK RRRG PKFCPF++S DEK LIWYSG++E+ L L S+  
Sbjct: 11  PRDRTDEQAILALKKGAQLLKCRRRGNPKFCPFKLSMDEKYLIWYSGEEERQLRLSSVIT 70

Query: 294 IIPG--TVNFQRQPEPGKESQSFSIISANGERSLDLICKDEAQAESWLVGLRAVVSKSHV 121
           I+ G  T NFQ+Q +  ++ QSFS+I ANGE +LDLICKD+AQA+SW  GLRAV++K H 
Sbjct: 71  IVRGQITPNFQKQAQSDRKEQSFSLIYANGEHTLDLICKDKAQADSWFKGLRAVITKHHN 130

Query: 120 HKSYATMRSCRGAKSCINSPVGYSRRKRNLGLSE---DLTKL 4
            ++ A +R+ RGA+SCINSP G+ RRK+NLGL E   DLT++
Sbjct: 131 IRNSANLRTSRGAQSCINSPAGFMRRKQNLGLLEETPDLTQI 172