BLASTX nr result

ID: Coptis24_contig00026540 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00026540
         (291 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527563.1| conserved hypothetical protein [Ricinus comm...   115   5e-24
ref|XP_002312864.1| predicted protein [Populus trichocarpa] gi|2...   114   8e-24
ref|NP_001238276.1| uncharacterized protein LOC100305889 [Glycin...   111   7e-23
ref|XP_003601356.1| hypothetical protein MTR_3g079820 [Medicago ...   110   2e-22
ref|XP_002276937.1| PREDICTED: uncharacterized protein LOC100265...   108   6e-22

>ref|XP_002527563.1| conserved hypothetical protein [Ricinus communis]
           gi|223533055|gb|EEF34815.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 128

 Score =  115 bits (287), Expect = 5e-24
 Identities = 58/87 (66%), Positives = 69/87 (79%), Gaps = 1/87 (1%)
 Frame = -1

Query: 258 IITKCEQTNDSSELSADQNST-LKIGSAIIVVDAPKTIKTAASISCLKVNADLVKTGDVG 82
           + TKC+    SSE S     T L IGS I+VV+APK IKTAAS+ CL+VN+ LVK GDVG
Sbjct: 35  VATKCQSQESSSETSPPAKITKLAIGSPIVVVEAPKMIKTAASVPCLRVNSGLVKPGDVG 94

Query: 81  RIVARKPKDVWAVQLAIGTYLIDGKHF 1
           RIV+RKPKDVWAV+L+IGTYLIDGK+F
Sbjct: 95  RIVSRKPKDVWAVRLSIGTYLIDGKYF 121


>ref|XP_002312864.1| predicted protein [Populus trichocarpa] gi|222849272|gb|EEE86819.1|
           predicted protein [Populus trichocarpa]
          Length = 129

 Score =  114 bits (285), Expect = 8e-24
 Identities = 58/100 (58%), Positives = 74/100 (74%), Gaps = 3/100 (3%)
 Frame = -1

Query: 291 SVSNHVFQKSLIITKCEQTNDSSE---LSADQNSTLKIGSAIIVVDAPKTIKTAASISCL 121
           S++N   +K  +IT+CE    SS    L A   + L IGS ++V++APK IKTAA++ CL
Sbjct: 23  SINNARNRKLNVITRCESRESSSSETNLPAKSTAKLGIGSPVVVIEAPKMIKTAATMPCL 82

Query: 120 KVNADLVKTGDVGRIVARKPKDVWAVQLAIGTYLIDGKHF 1
           +VN   VK GDVGRIV+RKPKDVWAV+LAIGTYLIDGK+F
Sbjct: 83  RVNTGFVKPGDVGRIVSRKPKDVWAVRLAIGTYLIDGKYF 122


>ref|NP_001238276.1| uncharacterized protein LOC100305889 [Glycine max]
           gi|255626895|gb|ACU13792.1| unknown [Glycine max]
          Length = 128

 Score =  111 bits (277), Expect = 7e-23
 Identities = 54/85 (63%), Positives = 70/85 (82%)
 Frame = -1

Query: 255 ITKCEQTNDSSELSADQNSTLKIGSAIIVVDAPKTIKTAASISCLKVNADLVKTGDVGRI 76
           + +CE    SSEL  +++S L+IGS II ++APK IKTAA++ CL+VN+ LVK GDVGRI
Sbjct: 36  LIRCESKESSSELP-EKHSKLEIGSPIIFIEAPKMIKTAATMPCLRVNSGLVKPGDVGRI 94

Query: 75  VARKPKDVWAVQLAIGTYLIDGKHF 1
           V+RKPKDVWAV+L IGTYL+DGK+F
Sbjct: 95  VSRKPKDVWAVRLRIGTYLVDGKYF 119


>ref|XP_003601356.1| hypothetical protein MTR_3g079820 [Medicago truncatula]
           gi|355490404|gb|AES71607.1| hypothetical protein
           MTR_3g079820 [Medicago truncatula]
          Length = 128

 Score =  110 bits (274), Expect = 2e-22
 Identities = 54/89 (60%), Positives = 70/89 (78%), Gaps = 1/89 (1%)
 Frame = -1

Query: 264 SLIITKCEQTNDSSELSA-DQNSTLKIGSAIIVVDAPKTIKTAASISCLKVNADLVKTGD 88
           S+ + +CE  + S E    ++ S L  GS II+++APK IKTAAS+ CL+VN+ LVK GD
Sbjct: 31  SVALVRCESKDSSEENELLEKRSKLDKGSPIIIIEAPKMIKTAASVPCLRVNSGLVKPGD 90

Query: 87  VGRIVARKPKDVWAVQLAIGTYLIDGKHF 1
           VGRIV+RKPKDVWAV+L+IGTYLIDGK+F
Sbjct: 91  VGRIVSRKPKDVWAVRLSIGTYLIDGKYF 119


>ref|XP_002276937.1| PREDICTED: uncharacterized protein LOC100265104 [Vitis vinifera]
           gi|296084005|emb|CBI24393.3| unnamed protein product
           [Vitis vinifera]
          Length = 113

 Score =  108 bits (269), Expect = 6e-22
 Identities = 52/89 (58%), Positives = 69/89 (77%)
 Frame = -1

Query: 267 KSLIITKCEQTNDSSELSADQNSTLKIGSAIIVVDAPKTIKTAASISCLKVNADLVKTGD 88
           KS++  +     +  E S+ + S L+IGS IIV++APK +KTAAS+ CL+ NA LVK GD
Sbjct: 19  KSILERQTRVKCEFGEKSSPKTSELEIGSPIIVIEAPKVLKTAASVPCLRANAGLVKAGD 78

Query: 87  VGRIVARKPKDVWAVQLAIGTYLIDGKHF 1
           VGR+V+RKPKDVWAV+L+IGTYLID K+F
Sbjct: 79  VGRVVSRKPKDVWAVRLSIGTYLIDAKYF 107


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