BLASTX nr result

ID: Coptis24_contig00026474 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00026474
         (513 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADL36700.1| GRF domain class transcription factor [Malus x do...    86   3e-15
emb|CBI34676.3| unnamed protein product [Vitis vinifera]               84   9e-15
ref|XP_002269986.1| PREDICTED: putative Holliday junction resolv...    84   9e-15
ref|XP_004143911.1| PREDICTED: putative Holliday junction resolv...    79   3e-13
ref|XP_002509795.1| conserved hypothetical protein [Ricinus comm...    79   3e-13

>gb|ADL36700.1| GRF domain class transcription factor [Malus x domestica]
          Length = 170

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 42/53 (79%), Positives = 47/53 (88%)
 Frame = -2

Query: 512 KLEGLRYTYWDERFTSKSVEGLLKHLHLDPVTSKTILDKFAAVGILQEYLDYM 354
           KLEGL+YTYWDE FTSK+VE LLK L+L PV SKTI+DKFAAVGILQ YLDY+
Sbjct: 108 KLEGLKYTYWDEGFTSKNVELLLKPLNLPPVQSKTIMDKFAAVGILQGYLDYV 160


>emb|CBI34676.3| unnamed protein product [Vitis vinifera]
          Length = 224

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 42/53 (79%), Positives = 47/53 (88%)
 Frame = -2

Query: 512 KLEGLRYTYWDERFTSKSVEGLLKHLHLDPVTSKTILDKFAAVGILQEYLDYM 354
           KLEG+RYTYWDE FTSK+VE LLK L+L PV SKTILDKFAAVGILQ YLD++
Sbjct: 163 KLEGVRYTYWDECFTSKNVELLLKPLNLHPVQSKTILDKFAAVGILQGYLDHV 215


>ref|XP_002269986.1| PREDICTED: putative Holliday junction resolvase [Vitis vinifera]
          Length = 169

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 42/53 (79%), Positives = 47/53 (88%)
 Frame = -2

Query: 512 KLEGLRYTYWDERFTSKSVEGLLKHLHLDPVTSKTILDKFAAVGILQEYLDYM 354
           KLEG+RYTYWDE FTSK+VE LLK L+L PV SKTILDKFAAVGILQ YLD++
Sbjct: 108 KLEGVRYTYWDECFTSKNVELLLKPLNLHPVQSKTILDKFAAVGILQGYLDHV 160


>ref|XP_004143911.1| PREDICTED: putative Holliday junction resolvase-like isoform 2
           [Cucumis sativus] gi|449495809|ref|XP_004159951.1|
           PREDICTED: putative Holliday junction resolvase-like
           isoform 2 [Cucumis sativus]
          Length = 169

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 38/52 (73%), Positives = 45/52 (86%)
 Frame = -2

Query: 512 KLEGLRYTYWDERFTSKSVEGLLKHLHLDPVTSKTILDKFAAVGILQEYLDY 357
           KLEG++YT+WDE FTSK+VE L+K L+L P  SKTI+DKFAAVGILQ YLDY
Sbjct: 108 KLEGVKYTFWDECFTSKNVELLIKPLNLLPAVSKTIIDKFAAVGILQGYLDY 159


>ref|XP_002509795.1| conserved hypothetical protein [Ricinus communis]
           gi|223549694|gb|EEF51182.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 168

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 38/53 (71%), Positives = 46/53 (86%)
 Frame = -2

Query: 512 KLEGLRYTYWDERFTSKSVEGLLKHLHLDPVTSKTILDKFAAVGILQEYLDYM 354
           KLEGL+YT+WDE FTSK+VE L++ L L PV +KTI+DKFAAVGILQ YLDY+
Sbjct: 106 KLEGLKYTFWDECFTSKNVELLVQPLDLHPVEAKTIMDKFAAVGILQGYLDYV 158


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