BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00026468
         (1034 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632713.1| PREDICTED: pentatricopeptide repeat-containi...   410   e-112
ref|XP_002319164.1| predicted protein [Populus trichocarpa] gi|2...   400   e-109
dbj|BAJ97995.1| predicted protein [Hordeum vulgare subsp. vulgare]    378   e-102
ref|XP_002446412.1| hypothetical protein SORBIDRAFT_06g015580 [S...   376   e-102
tpg|DAA37919.1| TPA: hypothetical protein ZEAMMB73_411767 [Zea m...   375   e-102

>ref|XP_003632713.1| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
            [Vitis vinifera]
          Length = 989

 Score =  410 bits (1054), Expect = e-112
 Identities = 188/251 (74%), Positives = 223/251 (88%)
 Frame = -2

Query: 1033 NKGLSYLKSMSIEHGIVPGPEHYACVVDVLGRAGLLERAKIFVEEMPIAPDAMVWRTLLS 854
            N+GLSY +SMS EHG+VP PEHY CVVD+LGRA LL  A+ F+EEMPI PDAM+WRTLLS
Sbjct: 735  NEGLSYFRSMSKEHGLVPKPEHYVCVVDLLGRAALLCCAREFIEEMPIEPDAMIWRTLLS 794

Query: 853  ACTVHKNVDIGELAARHLLYLEPQDSASYVLLSNIYAVAKKWDCRNQMKQMMKDRGVKKE 674
            ACTVHKN++IGE AARHLL LEP+DSA+YVLLSN+YAV+ KWD R++ +QMMKDRGVKKE
Sbjct: 795  ACTVHKNIEIGEFAARHLLELEPEDSATYVLLSNMYAVSGKWDYRDRTRQMMKDRGVKKE 854

Query: 673  PGRSWIEVKNSVHAFFVGDRLHPLADKIYDYLEDLNERVSEIGYTQDRNSLLHDIEQSQK 494
            PGRSWIEVKNS+HAFFVGDRLHPLA++IY+Y++DLNER  EIGY QDR +LL+D+EQ QK
Sbjct: 855  PGRSWIEVKNSIHAFFVGDRLHPLAEQIYEYIDDLNERAGEIGYVQDRYNLLNDVEQEQK 914

Query: 493  DPSVYIHSEKLAVAFGLISLSPSIPVCVIKNIRVCNDCHNWMKFVSKVSERPLVVRDPYR 314
            DP+ YIHSEKLAVAFGL+SL+ ++P+ VIKN+RVCNDCHNW+KFVSK+S R +VVRD YR
Sbjct: 915  DPTAYIHSEKLAVAFGLLSLTNTMPIRVIKNLRVCNDCHNWIKFVSKISNRAIVVRDAYR 974

Query: 313  FHHFSDGTCSC 281
            FHHF  G CSC
Sbjct: 975  FHHFEGGVCSC 985


>ref|XP_002319164.1| predicted protein [Populus trichocarpa] gi|222857540|gb|EEE95087.1|
            predicted protein [Populus trichocarpa]
          Length = 989

 Score =  400 bits (1029), Expect = e-109
 Identities = 180/250 (72%), Positives = 220/250 (88%)
 Frame = -2

Query: 1030 KGLSYLKSMSIEHGIVPGPEHYACVVDVLGRAGLLERAKIFVEEMPIAPDAMVWRTLLSA 851
            KGL Y +SMS EHG+VP P HYACVVD++ RAG L RA+ F+EEMPI PDA +WRTLLSA
Sbjct: 736  KGLGYFESMSKEHGLVPKPAHYACVVDLISRAGFLSRARKFIEEMPIEPDATIWRTLLSA 795

Query: 850  CTVHKNVDIGELAARHLLYLEPQDSASYVLLSNIYAVAKKWDCRNQMKQMMKDRGVKKEP 671
            CTVHKNV++GE AA+HLL LEP+DSA+YVLLSN+YAV+ KWDCR+Q +QMM++RGVKKEP
Sbjct: 796  CTVHKNVEVGEFAAQHLLELEPEDSATYVLLSNMYAVSGKWDCRDQTRQMMRNRGVKKEP 855

Query: 670  GRSWIEVKNSVHAFFVGDRLHPLADKIYDYLEDLNERVSEIGYTQDRNSLLHDIEQSQKD 491
            GRSWIEVKNSVHAF+VGDRLHPLADKIY++L +LN++ +EIGY QDR SLL+D+EQ QKD
Sbjct: 856  GRSWIEVKNSVHAFYVGDRLHPLADKIYEFLAELNKKAAEIGYFQDRYSLLNDVEQEQKD 915

Query: 490  PSVYIHSEKLAVAFGLISLSPSIPVCVIKNIRVCNDCHNWMKFVSKVSERPLVVRDPYRF 311
            P+VYIHSEKLA+ FGL+SLS ++P+ V+KN+RVC DCH+W+KFVSK+S R ++VRD YRF
Sbjct: 916  PTVYIHSEKLAITFGLLSLSDTVPIHVMKNLRVCKDCHSWIKFVSKISNRAIIVRDAYRF 975

Query: 310  HHFSDGTCSC 281
            HHF  G CSC
Sbjct: 976  HHFEGGICSC 985


>dbj|BAJ97995.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 919

 Score =  378 bits (970), Expect = e-102
 Identities = 175/250 (70%), Positives = 212/250 (84%)
 Frame = -2

Query: 1030 KGLSYLKSMSIEHGIVPGPEHYACVVDVLGRAGLLERAKIFVEEMPIAPDAMVWRTLLSA 851
            +GL Y KSMS EHGI P P+HYACVVD+LGRAG L+RA+ FVEEMP++ +AMVWRTLLSA
Sbjct: 666  EGLGYFKSMSSEHGIHPRPDHYACVVDILGRAGQLDRARKFVEEMPVSANAMVWRTLLSA 725

Query: 850  CTVHKNVDIGELAARHLLYLEPQDSASYVLLSNIYAVAKKWDCRNQMKQMMKDRGVKKEP 671
            C VHKN++IGELAA++LL LEP DSASYVLLSN YAV  KW CR+ +++MMKDRGV+KEP
Sbjct: 726  CRVHKNIEIGELAAKYLLELEPHDSASYVLLSNAYAVTGKWACRDHVRKMMKDRGVRKEP 785

Query: 670  GRSWIEVKNSVHAFFVGDRLHPLADKIYDYLEDLNERVSEIGYTQDRNSLLHDIEQSQKD 491
            GRSWIEVKN VHAFFVGDRLHPLA +IY YL DL++R+++IGY Q    L H+ E+ QKD
Sbjct: 786  GRSWIEVKNVVHAFFVGDRLHPLAHQIYKYLADLDDRLAKIGYIQGNYFLFHEKEKEQKD 845

Query: 490  PSVYIHSEKLAVAFGLISLSPSIPVCVIKNIRVCNDCHNWMKFVSKVSERPLVVRDPYRF 311
            P+ ++HSEKLAVAFGL+SL PS+P+ VIKN+RVCNDCH WMKF S+V  R +V+RD YRF
Sbjct: 846  PTAFVHSEKLAVAFGLMSLPPSMPLRVIKNLRVCNDCHTWMKFTSEVMGREIVLRDVYRF 905

Query: 310  HHFSDGTCSC 281
            HHF++G CSC
Sbjct: 906  HHFNNGNCSC 915


>ref|XP_002446412.1| hypothetical protein SORBIDRAFT_06g015580 [Sorghum bicolor]
            gi|241937595|gb|EES10740.1| hypothetical protein
            SORBIDRAFT_06g015580 [Sorghum bicolor]
          Length = 317

 Score =  376 bits (966), Expect = e-102
 Identities = 171/250 (68%), Positives = 216/250 (86%)
 Frame = -2

Query: 1030 KGLSYLKSMSIEHGIVPGPEHYACVVDVLGRAGLLERAKIFVEEMPIAPDAMVWRTLLSA 851
            +GLSY KSMS  +G+ P P+HYACVVD+LGRAG L+RA+ FV+EMPI  DAMVWRTLLSA
Sbjct: 64   EGLSYFKSMSNVYGLNPTPDHYACVVDILGRAGQLDRARRFVDEMPITADAMVWRTLLSA 123

Query: 850  CTVHKNVDIGELAARHLLYLEPQDSASYVLLSNIYAVAKKWDCRNQMKQMMKDRGVKKEP 671
            C VHKN++IGELAA+HLL LEP DSASYVLLSN YAV  KW  R+Q+++MMKDRG++KEP
Sbjct: 124  CKVHKNIEIGELAAKHLLELEPHDSASYVLLSNAYAVTGKWANRDQVRKMMKDRGIRKEP 183

Query: 670  GRSWIEVKNSVHAFFVGDRLHPLADKIYDYLEDLNERVSEIGYTQDRNSLLHDIEQSQKD 491
            GRSWIE KN+VHAFFVGDRLHPL+D+IY +L +LN+R+++IGY Q++ +L H+ EQ QKD
Sbjct: 184  GRSWIEAKNAVHAFFVGDRLHPLSDQIYKFLSELNDRLAKIGYKQEKPNLFHEKEQEQKD 243

Query: 490  PSVYIHSEKLAVAFGLISLSPSIPVCVIKNIRVCNDCHNWMKFVSKVSERPLVVRDPYRF 311
            P+ ++HSEKLAVAFGL++L P IP+ VIKN+RVC+DCH+WMKF S+V+ R +V+RD YRF
Sbjct: 244  PTAFVHSEKLAVAFGLMTLPPCIPLRVIKNLRVCDDCHSWMKFTSEVTRREIVLRDVYRF 303

Query: 310  HHFSDGTCSC 281
            HHF+ G+CSC
Sbjct: 304  HHFNSGSCSC 313


>tpg|DAA37919.1| TPA: hypothetical protein ZEAMMB73_411767 [Zea mays]
          Length = 920

 Score =  375 bits (963), Expect = e-102
 Identities = 171/250 (68%), Positives = 216/250 (86%)
 Frame = -2

Query: 1030 KGLSYLKSMSIEHGIVPGPEHYACVVDVLGRAGLLERAKIFVEEMPIAPDAMVWRTLLSA 851
            +GLSY KSMS  +G+ P P+HYACVVD+LGRAG L+RA+ FV+EMPI  +AM+WRTLLSA
Sbjct: 667  EGLSYFKSMSNVYGLNPIPDHYACVVDILGRAGQLDRARRFVDEMPITANAMIWRTLLSA 726

Query: 850  CTVHKNVDIGELAARHLLYLEPQDSASYVLLSNIYAVAKKWDCRNQMKQMMKDRGVKKEP 671
            C VHKN++IGELAA+HLL LEP DSASYVLLSN YAV  KW  R+Q+++MMKDRG++KEP
Sbjct: 727  CKVHKNIEIGELAAKHLLELEPHDSASYVLLSNAYAVTGKWANRDQVRKMMKDRGIRKEP 786

Query: 670  GRSWIEVKNSVHAFFVGDRLHPLADKIYDYLEDLNERVSEIGYTQDRNSLLHDIEQSQKD 491
            GRSWIEVKN+VHAFFVGDRLHPL+D+IY +L +LN+R+S+IGY Q+  +L H+ EQ QKD
Sbjct: 787  GRSWIEVKNAVHAFFVGDRLHPLSDQIYKFLSELNDRLSKIGYKQENPNLFHEKEQEQKD 846

Query: 490  PSVYIHSEKLAVAFGLISLSPSIPVCVIKNIRVCNDCHNWMKFVSKVSERPLVVRDPYRF 311
            P+ ++HSEKLAVAFGL++L P IP+ VIKN+RVC+DCH+WMKF S+V+ R +V+RD YRF
Sbjct: 847  PTAFVHSEKLAVAFGLMTLPPCIPLRVIKNLRVCDDCHSWMKFTSEVTRREIVLRDVYRF 906

Query: 310  HHFSDGTCSC 281
            HHF+ G+CSC
Sbjct: 907  HHFNSGSCSC 916