BLASTX nr result

ID: Coptis24_contig00026467 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00026467
         (220 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517908.1| conserved hypothetical protein [Ricinus comm...    64   2e-08
ref|XP_002274122.1| PREDICTED: uncharacterized protein LOC100260...    63   3e-08
emb|CAN70485.1| hypothetical protein VITISV_041712 [Vitis vinifera]    63   3e-08
ref|XP_003607460.1| hypothetical protein MTR_4g078240 [Medicago ...    60   2e-07
ref|XP_003527430.1| PREDICTED: uncharacterized protein LOC100805...    60   2e-07

>ref|XP_002517908.1| conserved hypothetical protein [Ricinus communis]
           gi|223542890|gb|EEF44426.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 168

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 29/43 (67%), Positives = 35/43 (81%)
 Frame = +1

Query: 1   GRKITKDIVGFVIKIVIKEGNIVAAVCAVIGYFALTGRRSRDD 129
           GRKIT++I+GFV KI++KEGN VAAVCAV+GYFAL  R    D
Sbjct: 126 GRKITREIIGFVFKILLKEGNFVAAVCAVLGYFALVRRNYEAD 168


>ref|XP_002274122.1| PREDICTED: uncharacterized protein LOC100260881 [Vitis vinifera]
          Length = 182

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 28/43 (65%), Positives = 35/43 (81%)
 Frame = +1

Query: 1   GRKITKDIVGFVIKIVIKEGNIVAAVCAVIGYFALTGRRSRDD 129
           GR IT +I GFV+KI++KEGN+VAA+CAV+GYFAL  RR   D
Sbjct: 135 GRMITAEITGFVLKILLKEGNVVAAICAVLGYFALVRRRGEVD 177


>emb|CAN70485.1| hypothetical protein VITISV_041712 [Vitis vinifera]
          Length = 179

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 28/43 (65%), Positives = 35/43 (81%)
 Frame = +1

Query: 1   GRKITKDIVGFVIKIVIKEGNIVAAVCAVIGYFALTGRRSRDD 129
           GR IT +I GFV+KI++KEGN+VAA+CAV+GYFAL  RR   D
Sbjct: 132 GRMITAEITGFVLKILLKEGNVVAAICAVLGYFALVRRRGEVD 174


>ref|XP_003607460.1| hypothetical protein MTR_4g078240 [Medicago truncatula]
           gi|217071038|gb|ACJ83879.1| unknown [Medicago
           truncatula] gi|355508515|gb|AES89657.1| hypothetical
           protein MTR_4g078240 [Medicago truncatula]
           gi|388501324|gb|AFK38728.1| unknown [Medicago
           truncatula]
          Length = 167

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 28/40 (70%), Positives = 33/40 (82%)
 Frame = +1

Query: 1   GRKITKDIVGFVIKIVIKEGNIVAAVCAVIGYFALTGRRS 120
           GRKIT +I  FVIKI++KEGN+VAAVCAV+GYF L  R S
Sbjct: 127 GRKITGEIFSFVIKILLKEGNVVAAVCAVLGYFVLVRRNS 166


>ref|XP_003527430.1| PREDICTED: uncharacterized protein LOC100805467 [Glycine max]
          Length = 174

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 27/38 (71%), Positives = 33/38 (86%)
 Frame = +1

Query: 1   GRKITKDIVGFVIKIVIKEGNIVAAVCAVIGYFALTGR 114
           GRKITK+I GFV++ ++KEGN VAAVCAV+GYFAL  R
Sbjct: 123 GRKITKEIFGFVMRTLLKEGNFVAAVCAVLGYFALVRR 160


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