BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00026403
         (517 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510330.1| ubiquitin-protein ligase, putative [Ricinus ...    77   2e-12
ref|XP_003550361.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g...    70   2e-10
ref|XP_003588676.1| F-box/FBD/LRR-repeat protein [Medicago trunc...    69   4e-10
ref|XP_003589308.1| F-box/FBD/LRR-repeat protein [Medicago trunc...    67   2e-09
ref|XP_003589307.1| F-box/FBD/LRR-repeat protein [Medicago trunc...    67   2e-09

>ref|XP_002510330.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223551031|gb|EEF52517.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 426

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 46/131 (35%), Positives = 76/131 (58%)
 Frame = +2

Query: 11  LRYLKLFVNFQDMKQIVAVLCLCRSSPRLEVLDITVVWSGQSLLLYEKTFWEALLQKEKK 190
           L YL + +NF D+++  A LCL RSSP ++ L++      Q+ L     FWE        
Sbjct: 299 LNYLSIRINFNDLEENSAALCLLRSSPNVQELEMLARPEEQTSLGTITNFWED--DHWNN 356

Query: 191 IFGRLEYVVLVGFMGGQRELQFIQFVLQNSSMLKTFKIQWTKPALSQDEKLHAVEKMMQF 370
           +FG+L  V +VG  G + EL F+ F+L NS +L+   +   KPA S D     ++++++F
Sbjct: 357 LFGQLRLVRIVGISGIRCELDFMNFLLSNSPVLERMTV---KPA-SSDGGWELIKELLRF 412

Query: 371 ERSSAKAKVIF 403
            R+SA+A++I+
Sbjct: 413 RRASARAEIIY 423


>ref|XP_003550361.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g13570-like [Glycine
           max]
          Length = 427

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 45/131 (34%), Positives = 75/131 (57%)
 Frame = +2

Query: 11  LRYLKLFVNFQDMKQIVAVLCLCRSSPRLEVLDITVVWSGQSLLLYEKTFWEALLQKEKK 190
           L YL + +NF D+K+I A LCL RSSP L+ L+I      Q++LL     WE +      
Sbjct: 300 LSYLSIRINFNDLKEISASLCLLRSSPNLQELEILARPEEQTVLLTHTYCWEDVYFSCPV 359

Query: 191 IFGRLEYVVLVGFMGGQRELQFIQFVLQNSSMLKTFKIQWTKPALSQDEKLHAVEKMMQF 370
           +  +L YV + G  G + EL FI F+L +S +L+   +   KP  +    L  ++++++F
Sbjct: 360 M--QLRYVKIDGISGIKPELDFINFLLLHSPVLERMTV---KPVANVG--LELMKELLRF 412

Query: 371 ERSSAKAKVIF 403
            R+S +A++I+
Sbjct: 413 RRASGQAEIIY 423


>ref|XP_003588676.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
           gi|355477724|gb|AES58927.1| F-box/FBD/LRR-repeat protein
           [Medicago truncatula]
          Length = 428

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 43/136 (31%), Positives = 79/136 (58%), Gaps = 1/136 (0%)
 Frame = +2

Query: 11  LRYLKLFVNFQDMKQIVAVLCLCRSSPRLEVLDITVVWSGQSLLLYEKTF-WEALLQKEK 187
           L YL   +NF D K+I   LC+ RSSP L+ L+I      ++++L    F WE +   E 
Sbjct: 297 LTYLWFSINFYDFKEISTALCVFRSSPNLKELNIFAKHEKKTIVLAPAFFCWEDIF-LEP 355

Query: 188 KIFGRLEYVVLVGFMGGQRELQFIQFVLQNSSMLKTFKIQWTKPALSQDEKLHAVEKMMQ 367
            +  R+ +V + G  G + EL F++F+L +S +L+  ++   KP  +   KL  + ++++
Sbjct: 356 SMLTRVRHVGIEGISGIKSELDFMRFLLLHSPVLEKMRV---KPNFNVGSKL--MSELLR 410

Query: 368 FERSSAKAKVIFSNRI 415
           F+R+SA+A+V++   +
Sbjct: 411 FKRASAQAEVVYLGEV 426


>ref|XP_003589308.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
           gi|355478356|gb|AES59559.1| F-box/FBD/LRR-repeat protein
           [Medicago truncatula]
          Length = 428

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 47/136 (34%), Positives = 75/136 (55%), Gaps = 1/136 (0%)
 Frame = +2

Query: 11  LRYLKLFVNFQDMKQIVAVLCLCRSSPRLEVLDITVVWSGQSL-LLYEKTFWEALLQKEK 187
           L YL + +NF D K+I A LCL RSSP L  L+I      Q L L +    WE +     
Sbjct: 300 LSYLSIRINFYDSKEISAALCLFRSSPNLRELEILARPEEQPLPLAHHADCWEDVYLDWP 359

Query: 188 KIFGRLEYVVLVGFMGGQRELQFIQFVLQNSSMLKTFKIQWTKPALSQDEKLHAVEKMMQ 367
            +  R+ +V + G  G + EL FI F+L  S +L+   +   KPAL+   +L  V+++++
Sbjct: 360 VM--RVRHVRIDGISGIKPELDFISFILLYSPVLERMTV---KPALNASPEL--VKELLR 412

Query: 368 FERSSAKAKVIFSNRI 415
             R+S +A+VI+ + +
Sbjct: 413 LRRASGRAEVIYLDSV 428


>ref|XP_003589307.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
           gi|355478355|gb|AES59558.1| F-box/FBD/LRR-repeat protein
           [Medicago truncatula]
          Length = 660

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 47/136 (34%), Positives = 75/136 (55%), Gaps = 1/136 (0%)
 Frame = +2

Query: 11  LRYLKLFVNFQDMKQIVAVLCLCRSSPRLEVLDITVVWSGQSL-LLYEKTFWEALLQKEK 187
           L YL + +NF D K+I A LCL RSSP L  L+I      Q L L +    WE +     
Sbjct: 532 LSYLSIRINFYDSKEISAALCLFRSSPNLRELEILARPEEQPLPLAHHADCWEDVYLDWP 591

Query: 188 KIFGRLEYVVLVGFMGGQRELQFIQFVLQNSSMLKTFKIQWTKPALSQDEKLHAVEKMMQ 367
            +  R+ +V + G  G + EL FI F+L  S +L+   +   KPAL+   +L  V+++++
Sbjct: 592 VM--RVRHVRIDGISGIKPELDFISFILLYSPVLERMTV---KPALNASPEL--VKELLR 644

Query: 368 FERSSAKAKVIFSNRI 415
             R+S +A+VI+ + +
Sbjct: 645 LRRASGRAEVIYLDSV 660