BLASTX nr result

ID: Coptis24_contig00026297 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00026297
         (575 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004157881.1| PREDICTED: WD repeat domain-containing prote...   190   2e-46
ref|XP_004141980.1| PREDICTED: WD repeat domain-containing prote...   190   2e-46
ref|XP_002274426.1| PREDICTED: WD repeat domain-containing prote...   190   2e-46
emb|CAN65101.1| hypothetical protein VITISV_039726 [Vitis vinifera]   190   2e-46
ref|XP_003630176.1| Mitogen-activated protein kinase organizer [...   187   1e-45

>ref|XP_004157881.1| PREDICTED: WD repeat domain-containing protein 83-like, partial
           [Cucumis sativus]
          Length = 122

 Score =  190 bits (482), Expect = 2e-46
 Identities = 85/98 (86%), Positives = 94/98 (95%)
 Frame = +3

Query: 3   ASCLDSTMRLLDRTTGELLQEYKGHTCKSFKMDCCLTNDDAHITGGSEDGFIYFWDLVDA 182
           ASCLDST+RLLDR++GELLQEYKGHTCKS+K+DCCLTN DAH+TGGSEDGF+YFWDLVDA
Sbjct: 24  ASCLDSTLRLLDRSSGELLQEYKGHTCKSYKLDCCLTNTDAHVTGGSEDGFVYFWDLVDA 83

Query: 183 SVVSSFRAHSSVVTSVSYHPKDNCMVTSSVDSTIRVWK 296
           SVVS FRAHSSVVTSVSYHPKD CM+T+SVD TIRVWK
Sbjct: 84  SVVSKFRAHSSVVTSVSYHPKDKCMITASVDGTIRVWK 121


>ref|XP_004141980.1| PREDICTED: WD repeat domain-containing protein 83-like [Cucumis
           sativus]
          Length = 299

 Score =  190 bits (482), Expect = 2e-46
 Identities = 85/98 (86%), Positives = 94/98 (95%)
 Frame = +3

Query: 3   ASCLDSTMRLLDRTTGELLQEYKGHTCKSFKMDCCLTNDDAHITGGSEDGFIYFWDLVDA 182
           ASCLDST+RLLDR++GELLQEYKGHTCKS+K+DCCLTN DAH+TGGSEDGF+YFWDLVDA
Sbjct: 201 ASCLDSTLRLLDRSSGELLQEYKGHTCKSYKLDCCLTNTDAHVTGGSEDGFVYFWDLVDA 260

Query: 183 SVVSSFRAHSSVVTSVSYHPKDNCMVTSSVDSTIRVWK 296
           SVVS FRAHSSVVTSVSYHPKD CM+T+SVD TIRVWK
Sbjct: 261 SVVSKFRAHSSVVTSVSYHPKDKCMITASVDGTIRVWK 298


>ref|XP_002274426.1| PREDICTED: WD repeat domain-containing protein 83 [Vitis vinifera]
           gi|297743030|emb|CBI35897.3| unnamed protein product
           [Vitis vinifera]
          Length = 299

 Score =  190 bits (482), Expect = 2e-46
 Identities = 86/98 (87%), Positives = 95/98 (96%)
 Frame = +3

Query: 3   ASCLDSTMRLLDRTTGELLQEYKGHTCKSFKMDCCLTNDDAHITGGSEDGFIYFWDLVDA 182
           ASCLDST+RLLDR+TGELLQEYKGHTCKS+KMDCCLTN DAH+T GSEDGFI+FWDLVDA
Sbjct: 201 ASCLDSTLRLLDRSTGELLQEYKGHTCKSYKMDCCLTNTDAHVTSGSEDGFIFFWDLVDA 260

Query: 183 SVVSSFRAHSSVVTSVSYHPKDNCMVTSSVDSTIRVWK 296
           SVVSSFRAH+SVVTSVSYHPKD+CM+T+SVD TIRVWK
Sbjct: 261 SVVSSFRAHASVVTSVSYHPKDDCMITASVDGTIRVWK 298


>emb|CAN65101.1| hypothetical protein VITISV_039726 [Vitis vinifera]
          Length = 264

 Score =  190 bits (482), Expect = 2e-46
 Identities = 86/98 (87%), Positives = 95/98 (96%)
 Frame = +3

Query: 3   ASCLDSTMRLLDRTTGELLQEYKGHTCKSFKMDCCLTNDDAHITGGSEDGFIYFWDLVDA 182
           ASCLDST+RLLDR+TGELLQEYKGHTCKS+KMDCCLTN DAH+T GSEDGFI+FWDLVDA
Sbjct: 166 ASCLDSTLRLLDRSTGELLQEYKGHTCKSYKMDCCLTNTDAHVTSGSEDGFIFFWDLVDA 225

Query: 183 SVVSSFRAHSSVVTSVSYHPKDNCMVTSSVDSTIRVWK 296
           SVVSSFRAH+SVVTSVSYHPKD+CM+T+SVD TIRVWK
Sbjct: 226 SVVSSFRAHASVVTSVSYHPKDDCMITASVDGTIRVWK 263


>ref|XP_003630176.1| Mitogen-activated protein kinase organizer [Medicago truncatula]
           gi|355524198|gb|AET04652.1| Mitogen-activated protein
           kinase organizer [Medicago truncatula]
          Length = 306

 Score =  187 bits (475), Expect = 1e-45
 Identities = 85/98 (86%), Positives = 93/98 (94%)
 Frame = +3

Query: 3   ASCLDSTMRLLDRTTGELLQEYKGHTCKSFKMDCCLTNDDAHITGGSEDGFIYFWDLVDA 182
           A CLDST+RLLDRTTGELLQEYKGHT KS+K+DCCLTN DAH+TGGSEDGF+YFWDLVDA
Sbjct: 208 AGCLDSTVRLLDRTTGELLQEYKGHTNKSYKLDCCLTNTDAHVTGGSEDGFVYFWDLVDA 267

Query: 183 SVVSSFRAHSSVVTSVSYHPKDNCMVTSSVDSTIRVWK 296
           SVVS FRAH+SVVTSVSYHPK+NCM+TSSVD TIRVWK
Sbjct: 268 SVVSKFRAHTSVVTSVSYHPKENCMITSSVDGTIRVWK 305


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