BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00026169
         (460 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EAZ05209.1| hypothetical protein OsI_27408 [Oryza sativa Indi...    70   2e-10
gb|EEE67854.1| hypothetical protein OsJ_25657 [Oryza sativa Japo...    64   1e-08
dbj|BAC21359.1| hypothetical protein [Oryza sativa Japonica Grou...    64   1e-08
ref|NP_564725.1| F-box protein [Arabidopsis thaliana] gi|7517266...    62   5e-08
gb|AAM61116.1| unknown [Arabidopsis thaliana]                          62   5e-08

>gb|EAZ05209.1| hypothetical protein OsI_27408 [Oryza sativa Indica Group]
          Length = 201

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 41/112 (36%), Positives = 56/112 (50%), Gaps = 12/112 (10%)
 Frame = -1

Query: 451 HIFFFNPFTMETITVPDVED--FNRFRGISFSAPPTSSEFVVFG----------HTALSL 308
           +++  NPFT E    P+      N+F GI  SA PTS + + F           + ++ +
Sbjct: 36  YMYATNPFTGEMFEFPEATFPVDNQFDGICLSAAPTSPDCIAFSVEKDRNPTGRNRSVYV 95

Query: 307 SLYRKGEHTWREYFCDVPWDIMDYPCNPVFCDGEFYCLGKDGMLALFNPEET 152
           +L+R G+  W     D         CNPVF DGEFYCLG  G LA+FNP  T
Sbjct: 96  TLWRAGDEQWTMQRIDDHTPFRTAYCNPVFYDGEFYCLGTRGGLAVFNPNNT 147


>gb|EEE67854.1| hypothetical protein OsJ_25657 [Oryza sativa Japonica Group]
          Length = 630

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 35/89 (39%), Positives = 46/89 (51%), Gaps = 10/89 (11%)
 Frame = -1

Query: 388 NRFRGISFSAPPTSSEFVVFG----------HTALSLSLYRKGEHTWREYFCDVPWDIMD 239
           N+F GI  SA PTS + + F           + ++ ++L+R G+  W     D       
Sbjct: 488 NQFDGICLSAAPTSPDCIAFSVEKDRNPTGRNRSVYVTLWRAGDEQWTMQRIDDHTPFRT 547

Query: 238 YPCNPVFCDGEFYCLGKDGMLALFNPEET 152
             CNPVF DGEFYCLG  G LA+FNP  T
Sbjct: 548 AYCNPVFYDGEFYCLGTRGGLAVFNPNNT 576


>dbj|BAC21359.1| hypothetical protein [Oryza sativa Japonica Group]
           gi|50509288|dbj|BAD30595.1| hypothetical protein [Oryza
           sativa Japonica Group]
          Length = 625

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 35/89 (39%), Positives = 46/89 (51%), Gaps = 10/89 (11%)
 Frame = -1

Query: 388 NRFRGISFSAPPTSSEFVVFG----------HTALSLSLYRKGEHTWREYFCDVPWDIMD 239
           N+F GI  SA PTS + + F           + ++ ++L+R G+  W     D       
Sbjct: 483 NQFDGICLSAAPTSPDCIAFSVEKDRNPTGRNRSVYVTLWRAGDEQWTMQRIDDHTPFRT 542

Query: 238 YPCNPVFCDGEFYCLGKDGMLALFNPEET 152
             CNPVF DGEFYCLG  G LA+FNP  T
Sbjct: 543 AYCNPVFYDGEFYCLGTRGGLAVFNPNNT 571


>ref|NP_564725.1| F-box protein [Arabidopsis thaliana]
           gi|75172668|sp|Q9FVS1.1|FBK23_ARATH RecName:
           Full=F-box/kelch-repeat protein At1g57790
           gi|11079521|gb|AAG29231.1|AC079732_2 hypothetical
           protein [Arabidopsis thaliana]
           gi|20466201|gb|AAM20418.1| unknown protein [Arabidopsis
           thaliana] gi|30984578|gb|AAP42752.1| At1g57790
           [Arabidopsis thaliana] gi|332195346|gb|AEE33467.1| F-box
           protein [Arabidopsis thaliana]
          Length = 352

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 35/106 (33%), Positives = 59/106 (55%), Gaps = 7/106 (6%)
 Frame = -1

Query: 457 ATHIFFFNPFTMETITVPDVEDFNRFRGISFSAPPTSSEFVVF-------GHTALSLSLY 299
           ++H   FNPFTM+ + +P +  F  ++ + FS+ PTSSE VVF       GH  +++  +
Sbjct: 108 SSHFVLFNPFTMDVVALPFLHLFTYYQLVGFSSAPTSSECVVFTIKDYDPGH--VTIRTW 165

Query: 298 RKGEHTWREYFCDVPWDIMDYPCNPVFCDGEFYCLGKDGMLALFNP 161
             G+  W     +  +  +D+  N VF +G FYCL +   +A+F+P
Sbjct: 166 SPGQTMWTSMQVESQFLDVDHN-NVVFSNGVFYCLNQRNHVAVFDP 210


>gb|AAM61116.1| unknown [Arabidopsis thaliana]
          Length = 352

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 35/106 (33%), Positives = 59/106 (55%), Gaps = 7/106 (6%)
 Frame = -1

Query: 457 ATHIFFFNPFTMETITVPDVEDFNRFRGISFSAPPTSSEFVVF-------GHTALSLSLY 299
           ++H   FNPFTM+ + +P +  F  ++ + FS+ PTSSE VVF       GH  +++  +
Sbjct: 108 SSHFVLFNPFTMDVVALPFLHLFTYYQLVGFSSAPTSSECVVFTIKDYDPGH--VTIRTW 165

Query: 298 RKGEHTWREYFCDVPWDIMDYPCNPVFCDGEFYCLGKDGMLALFNP 161
             G+  W     +  +  +D+  N VF +G FYCL +   +A+F+P
Sbjct: 166 SPGQTMWTSMQVESQFLDVDHN-NVVFSNGVFYCLNQRNHVAVFDP 210