BLASTX nr result

ID: Coptis24_contig00026025 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00026025
         (1135 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN65347.1| hypothetical protein VITISV_000637 [Vitis vinifera]   182   1e-43
emb|CBI16583.3| unnamed protein product [Vitis vinifera]              162   1e-37
ref|XP_002320705.1| predicted protein [Populus trichocarpa] gi|2...   141   3e-31
ref|XP_002511652.1| nucleotidyltransferase, putative [Ricinus co...   118   3e-24
gb|AFW76050.1| hypothetical protein ZEAMMB73_219043 [Zea mays]        110   6e-22

>emb|CAN65347.1| hypothetical protein VITISV_000637 [Vitis vinifera]
          Length = 1500

 Score =  182 bits (462), Expect = 1e-43
 Identities = 94/217 (43%), Positives = 131/217 (60%)
 Frame = +3

Query: 483  SGCCKKSSGVEVSACTLNSEIRTPVMSVVGLDNNDIFGTDLTNDNSENLSDVASQSVVAP 662
            S  CK ++G   +  T  S    PV+S + +D     G D+   NSE+LS+  ++ V   
Sbjct: 617  SSPCKPTNGPSRAETTAQSIREDPVVSSIEVDVA-FSGEDIKFQNSEHLSETDTKCVSDK 675

Query: 663  TLFGVDSKEETVSFQRNEMDNSCAQWPRSFAGSTSYEWPSVAHCNIPFVNSQHLPAATDR 842
             +   + +EE V  Q  E    C     S +   SYEWP+VA  +   +NSQHLPAATDR
Sbjct: 676  PIKATELEEEIVQNQEQERGKFCNTGSTSSSECPSYEWPTVAPIHFTSINSQHLPAATDR 735

Query: 843  LHLDVGCNWRNRFHPSFVSTRHQAISPSIEGGGKRLMPRTLPLSVDWPPMVRSASRLTSS 1022
            LHLDVG NW N FH SFV + HQ  +P ++ G  +++ R LP+S+DWPPMVRS SRL  S
Sbjct: 736  LHLDVGRNWHNHFHQSFVPSIHQTRNPPLDAGCSQILSRPLPMSLDWPPMVRSISRLAPS 795

Query: 1023 ISCSYDSGFMPRLQSTYQQGLTPHRLQFNGTISDDER 1133
            ++C+YD GF+ R+QS+++QG   H +Q N   S+DER
Sbjct: 796  MTCNYDPGFISRMQSSFRQGFPAHNVQVNTATSEDER 832


>emb|CBI16583.3| unnamed protein product [Vitis vinifera]
          Length = 1331

 Score =  162 bits (411), Expect = 1e-37
 Identities = 85/194 (43%), Positives = 117/194 (60%)
 Frame = +3

Query: 483  SGCCKKSSGVEVSACTLNSEIRTPVMSVVGLDNNDIFGTDLTNDNSENLSDVASQSVVAP 662
            S  CK ++G   +  T  S    PV+S + +D     G D+   NSE+LS+  ++ V   
Sbjct: 413  SSPCKPTNGPSRAETTAQSIREDPVVSSIEVDVA-FSGEDIKFQNSEHLSETDTKCVSDK 471

Query: 663  TLFGVDSKEETVSFQRNEMDNSCAQWPRSFAGSTSYEWPSVAHCNIPFVNSQHLPAATDR 842
             +   + +EE V  Q  E    C     S +   SYEWP+VA  +   +NSQHLPAATDR
Sbjct: 472  PIKATELEEEIVQNQEQERGKFCNTGSTSSSECPSYEWPTVAPIHFTSINSQHLPAATDR 531

Query: 843  LHLDVGCNWRNRFHPSFVSTRHQAISPSIEGGGKRLMPRTLPLSVDWPPMVRSASRLTSS 1022
            LHLDVG NW N FH SFV + HQ  +PS++ G  +++ R LP+S+DWPPMVRS SRL  S
Sbjct: 532  LHLDVGRNWHNHFHQSFVPSIHQTRNPSLDAGCSQILSRPLPMSLDWPPMVRSISRLAPS 591

Query: 1023 ISCSYDSGFMPRLQ 1064
            ++C+YD GF+ R+Q
Sbjct: 592  MTCNYDPGFISRMQ 605


>ref|XP_002320705.1| predicted protein [Populus trichocarpa] gi|222861478|gb|EEE99020.1|
            predicted protein [Populus trichocarpa]
          Length = 1566

 Score =  141 bits (355), Expect = 3e-31
 Identities = 76/180 (42%), Positives = 102/180 (56%)
 Frame = +3

Query: 594  GTDLTNDNSENLSDVASQSVVAPTLFGVDSKEETVSFQRNEMDNSCAQWPRSFAGSTSYE 773
            GT   N  +E   DV ++ V    +     KE     +R E +N      +  +   SYE
Sbjct: 668  GTSFLNKKTEVKLDVGNKLVRTHEV-----KEVPTLNRREESENFHESGSKGLSDCLSYE 722

Query: 774  WPSVAHCNIPFVNSQHLPAATDRLHLDVGCNWRNRFHPSFVSTRHQAISPSIEGGGKRLM 953
            WPS+     P +NS HLP AT RLHLDVG NW N  H  F+ T HQA +  IEGG  R++
Sbjct: 723  WPSLGPVYFPSINS-HLPPATYRLHLDVGHNWHNHIHQPFLPTVHQARNSPIEGGSNRML 781

Query: 954  PRTLPLSVDWPPMVRSASRLTSSISCSYDSGFMPRLQSTYQQGLTPHRLQFNGTISDDER 1133
             + LP+S+DWPPMVRS   L  +++C+YDSGF+ R QST+Q+  T   +Q+     DDER
Sbjct: 782  SQPLPMSLDWPPMVRSNCGLAPTMTCNYDSGFISRWQSTFQKSYTAKNMQYISKTFDDER 841


>ref|XP_002511652.1| nucleotidyltransferase, putative [Ricinus communis]
            gi|223548832|gb|EEF50321.1| nucleotidyltransferase,
            putative [Ricinus communis]
          Length = 1420

 Score =  118 bits (295), Expect = 3e-24
 Identities = 89/294 (30%), Positives = 146/294 (49%), Gaps = 18/294 (6%)
 Frame = +3

Query: 246  TLAASQCVSL--QRDAAVSDISPCDSSVHDLLNDLSIGSDGWTPDTCFDSSVSKHNSKFG 419
            ++A + CV +    +AA+   +  D ++ ++ +D  + S  +T +T F   V++   K G
Sbjct: 428  SVAEAPCVPVISSDEAAMLGRASDDLAIQNVFSDDLVESANFTLNTSFCGCVTEPR-KEG 486

Query: 420  XXXXXXXXXXXXXXXXXXXLHSGCCKKSSGVEVSACTLNSE----------------IRT 551
                               ++S C K++S V +   T++S                 ++T
Sbjct: 487  IDAKRVQGRVVGCNGGTCSINSEC-KQTSNVMIEDRTISSRAEGVNFKMEDKVISHVVQT 545

Query: 552  PVMSVVGLDNNDIFGTDLTNDNSENLSDVASQSVVAPTLFGVDSKEETVSFQRNEMDNSC 731
            P +  V   N DI      N+ ++  S+ + +     T+  ++ KE +   +   ++ + 
Sbjct: 546  PELDTVS-SNEDI---KFRNEETKGKSNFSYR-----TVRNINVKEGSTLIKNKILNEAR 596

Query: 732  AQWPRSFAGSTSYEWPSVAHCNIPFVNSQHLPAATDRLHLDVGCNWRNRFHPSFVSTRHQ 911
            +    + +   SYEWPS+A    P + S  LPAA DRLHLDVG NW +     FV T HQ
Sbjct: 597  ST---NLSEYISYEWPSLAPVYFPSITSHLLPAA-DRLHLDVGRNWHSHIRQPFVPTVHQ 652

Query: 912  AISPSIEGGGKRLMPRTLPLSVDWPPMVRSASRLTSSISCSYDSGFMPRLQSTY 1073
            A +  IE G  R + R LP+S+DWPPMVRS S L  S++C+YDSGF+ RLQ+ +
Sbjct: 653  ARTSPIESGYNRTLSRPLPMSLDWPPMVRSISGLAPSMTCNYDSGFISRLQTAF 706


>gb|AFW76050.1| hypothetical protein ZEAMMB73_219043 [Zea mays]
          Length = 1447

 Score =  110 bits (275), Expect = 6e-22
 Identities = 88/343 (25%), Positives = 142/343 (41%), Gaps = 32/343 (9%)
 Frame = +3

Query: 198  SNVMEVVTPEDSEVRSTLAASQCVSLQRDAAVSDISPCDSS-VHDLLNDLSIGSDGWTPD 374
            SN M   +P  +++++ +  S   +L   A  +D+SP   S VH   N++S         
Sbjct: 448  SNPMRPESPRSTKLKTVVPHSAAEALHEAAKEADVSPHHPSYVHPSKNEISEAV------ 501

Query: 375  TCFDSSVSKHNSKFGXXXXXXXXXXXXXXXXXXXLHSGCCKK----------SSGVEVSA 524
            +C D S+  + +K                     +HS    +             V+ S+
Sbjct: 502  SCSDPSILSNGTKV---ISTSKGTKLEDTLYSPRVHSSLATERFQSAHDDAFKVAVQASS 558

Query: 525  CTLNSEIRTPVMSVVGLDNNDIFGTDLTNDNSENLSDVASQSV----------------- 653
                SE      S +   +N++  T+L   + ++L   A +                   
Sbjct: 559  YLSQSESLVQSSSCLPSRSNEVSSTNLYGSSVDSLVRSAQEKTECDGKHVDHKSEVTKDR 618

Query: 654  VAPTLFGVDSKEETVSFQRNEMDNS---CAQWPRSFAGSTSYEWPSVAHCNIPFVNSQHL 824
            + P+    D  +  +S     M N    C  + R+  G TSYEWPSV   +      Q  
Sbjct: 619  ILPSAIPTDMLQSAISKNGGVMKNGGGECYVYNRNLLGGTSYEWPSVTPSHFVSPQMQQR 678

Query: 825  PAATDRLHLDVGCNWRNRFHPSFVSTRHQAISPSIEGGGKRLMPR-TLPLSVDWPPMVRS 1001
            PAA DRLHLDVG  W  +F+  F+   HQ  +P I+ G  +++P   +PLS DWPP+ R 
Sbjct: 679  PAAADRLHLDVGYRWPTQFNQPFLPANHQVRNPPIDAGHNQMLPSLAVPLSFDWPPVFRG 738

Query: 1002 ASRLTSSISCSYDSGFMPRLQSTYQQGLTPHRLQFNGTISDDE 1130
              +   + S SYD  + P++QS+   G     +Q  G  SD +
Sbjct: 739  YGK---NASVSYDPLYTPQMQSSAWSGFPAQLVQRGGICSDSD 778


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