BLASTX nr result

ID: Coptis24_contig00025443 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00025443
         (835 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268942.2| PREDICTED: 2-isopropylmalate synthase 2, chl...   175   1e-41
ref|XP_001761198.1| predicted protein [Physcomitrella patens sub...   172   1e-40
ref|XP_003556565.1| PREDICTED: 2-isopropylmalate synthase 2, chl...   171   1e-40
ref|XP_002530549.1| isopropylmalate synthase, putative [Ricinus ...   169   5e-40
ref|XP_001775199.1| predicted protein [Physcomitrella patens sub...   169   7e-40

>ref|XP_002268942.2| PREDICTED: 2-isopropylmalate synthase 2, chloroplastic-like [Vitis
           vinifera]
          Length = 628

 Score =  175 bits (444), Expect = 1e-41
 Identities = 85/101 (84%), Positives = 92/101 (91%)
 Frame = +2

Query: 533 YIPNTIPDPNYVRIFDTTLRDGEQSPGATMTSKEKLDVACQLSKLGVDIIEAGFPASLND 712
           YIPN I DPNYVRIFDTTLRDGEQSPGATMTSKEKLD+A QL+KLGVDIIEAGFPA+  D
Sbjct: 75  YIPNRIDDPNYVRIFDTTLRDGEQSPGATMTSKEKLDIARQLAKLGVDIIEAGFPAASKD 134

Query: 713 DLEAVKIIAKEVGNAVDDDGHVPVICCLARCNKADIDAAWE 835
           DL+AVKIIAKEVGNAVD++GHVPVIC LARCN+ DI  AWE
Sbjct: 135 DLDAVKIIAKEVGNAVDENGHVPVICGLARCNRNDISTAWE 175


>ref|XP_001761198.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162687538|gb|EDQ73920.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 616

 Score =  172 bits (435), Expect = 1e-40
 Identities = 83/101 (82%), Positives = 92/101 (91%)
 Frame = +2

Query: 533 YIPNTIPDPNYVRIFDTTLRDGEQSPGATMTSKEKLDVACQLSKLGVDIIEAGFPASLND 712
           YIPN I DP+YVRIFDTTLRDGEQSPGATMTSKEKLD+A QL++LGVDIIEAGFP +  D
Sbjct: 58  YIPNRIDDPSYVRIFDTTLRDGEQSPGATMTSKEKLDIARQLARLGVDIIEAGFPIASPD 117

Query: 713 DLEAVKIIAKEVGNAVDDDGHVPVICCLARCNKADIDAAWE 835
           DLEAV++IAKEVGN VDDDG+VPVIC L+RCNK DIDAAWE
Sbjct: 118 DLEAVRLIAKEVGNNVDDDGYVPVICGLSRCNKKDIDAAWE 158


>ref|XP_003556565.1| PREDICTED: 2-isopropylmalate synthase 2, chloroplastic-like
           [Glycine max]
          Length = 624

 Score =  171 bits (434), Expect = 1e-40
 Identities = 83/101 (82%), Positives = 92/101 (91%)
 Frame = +2

Query: 533 YIPNTIPDPNYVRIFDTTLRDGEQSPGATMTSKEKLDVACQLSKLGVDIIEAGFPASLND 712
           YIPN IPDP+YVRIFDTTLRDGEQSPGA+MTSKEKLDVA QL+KLGVDIIEAGFPA+  D
Sbjct: 70  YIPNRIPDPSYVRIFDTTLRDGEQSPGASMTSKEKLDVARQLAKLGVDIIEAGFPAASKD 129

Query: 713 DLEAVKIIAKEVGNAVDDDGHVPVICCLARCNKADIDAAWE 835
           D EAVK+IA+EVGNAVDDDG+VPVIC L+RCN+ DI  AWE
Sbjct: 130 DFEAVKMIAQEVGNAVDDDGYVPVICGLSRCNEKDIRTAWE 170


>ref|XP_002530549.1| isopropylmalate synthase, putative [Ricinus communis]
           gi|223529911|gb|EEF31840.1| isopropylmalate synthase,
           putative [Ricinus communis]
          Length = 632

 Score =  169 bits (429), Expect = 5e-40
 Identities = 82/101 (81%), Positives = 91/101 (90%)
 Frame = +2

Query: 533 YIPNTIPDPNYVRIFDTTLRDGEQSPGATMTSKEKLDVACQLSKLGVDIIEAGFPASLND 712
           YIP+ IPDP+YVRIFDTTLRDGEQSPGAT+TSKEKLD+A QLSKLGVDIIEAGFPA+  D
Sbjct: 77  YIPSHIPDPSYVRIFDTTLRDGEQSPGATLTSKEKLDIARQLSKLGVDIIEAGFPAASKD 136

Query: 713 DLEAVKIIAKEVGNAVDDDGHVPVICCLARCNKADIDAAWE 835
           D EAVK IAKEVGNAVD+DG+VPVIC L+RCN+ DI  AWE
Sbjct: 137 DFEAVKTIAKEVGNAVDEDGYVPVICGLSRCNEKDIRTAWE 177


>ref|XP_001775199.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162673412|gb|EDQ59935.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 583

 Score =  169 bits (428), Expect = 7e-40
 Identities = 81/101 (80%), Positives = 91/101 (90%)
 Frame = +2

Query: 533 YIPNTIPDPNYVRIFDTTLRDGEQSPGATMTSKEKLDVACQLSKLGVDIIEAGFPASLND 712
           Y+PN I DP YVRIFDTTLRDGEQSPGATMTSKEKLD+A QL++LGVDIIEAGFP +  D
Sbjct: 25  YVPNRIDDPAYVRIFDTTLRDGEQSPGATMTSKEKLDIARQLARLGVDIIEAGFPIASPD 84

Query: 713 DLEAVKIIAKEVGNAVDDDGHVPVICCLARCNKADIDAAWE 835
           DLEAV++IAKEVGN VD+DG+VPVIC L+RCNK DIDAAWE
Sbjct: 85  DLEAVRLIAKEVGNQVDEDGYVPVICGLSRCNKKDIDAAWE 125