BLASTX nr result
ID: Coptis24_contig00025393
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00025393
(899 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN84062.1| hypothetical protein VITISV_010661 [Vitis vinifera] 270 3e-70
emb|CBI25024.3| unnamed protein product [Vitis vinifera] 264 2e-68
ref|XP_002269452.1| PREDICTED: pentatricopeptide repeat-containi... 264 2e-68
ref|XP_003555883.1| PREDICTED: pentatricopeptide repeat-containi... 248 1e-63
ref|XP_004159483.1| PREDICTED: pentatricopeptide repeat-containi... 248 2e-63
>emb|CAN84062.1| hypothetical protein VITISV_010661 [Vitis vinifera]
Length = 641
Score = 270 bits (690), Expect = 3e-70
Identities = 134/250 (53%), Positives = 173/250 (69%)
Frame = +2
Query: 149 NVVNLQALLQKCAVDKIVWEGKVLHGQVFQAGLQVDTLLSNIIINMYSKCGFVDSARQVF 328
+V LQ LLQ A ++ EG H Q+ + GL+ DT+ SN+++NMYSKCG V+SAR++F
Sbjct: 46 HVSELQHLLQSSARNRAAIEGMACHAQIIRVGLRADTITSNMLMNMYSKCGLVESARKLF 105
Query: 329 DRMPERSLVSWNTMIGAHTKHGEEDEGLNLFMQMQREQVPPSEFTLXXXXXXXXXXXXVY 508
D MP RSLVSWNTM+G+HT++G+ ++ L LFMQMQ+E + SEFT+ V+
Sbjct: 106 DEMPVRSLVSWNTMVGSHTQNGDSEKALVLFMQMQKEGISCSEFTVSSVVCACAAKCCVF 165
Query: 509 ESKQLHAFALKIAFDSNVYVGTALLDVYAKCELINYACRIFDSMTERSAVTWSSMISGYV 688
E KQLH FALK A DSNV+VGTALLDVYAKC L+ A +F+ M ERS VTWSSM++GYV
Sbjct: 166 ECKQLHGFALKTALDSNVFVGTALLDVYAKCGLVKDASLVFECMPERSDVTWSSMVAGYV 225
Query: 689 QNNFHEEALMLFHKGQKVGAEQTQFTXXXXXXXXXXXXXXIEGNQIHAILVRTGYGLNLF 868
QN +EEAL+LFH+ Q +G E QFT IEG Q+ A+L +TG G N+F
Sbjct: 226 QNELYEEALVLFHRAQAMGLEHNQFTISSALSACAARAALIEGKQVQAVLCKTGIGSNIF 285
Query: 869 VSASLIDMYA 898
V +SLIDMYA
Sbjct: 286 VISSLIDMYA 295
Score = 121 bits (304), Expect = 2e-25
Identities = 63/195 (32%), Positives = 110/195 (56%)
Frame = +2
Query: 182 CAVDKIVWEGKVLHGQVFQAGLQVDTLLSNIIINMYSKCGFVDSARQVFDRMPERSLVSW 361
CA V+E K LHG + L + + ++++Y+KCG V A VF+ MPERS V+W
Sbjct: 158 CAAKCCVFECKQLHGFALKTALDSNVFVGTALLDVYAKCGLVKDASLVFECMPERSDVTW 217
Query: 362 NTMIGAHTKHGEEDEGLNLFMQMQREQVPPSEFTLXXXXXXXXXXXXVYESKQLHAFALK 541
++M+ + ++ +E L LF + Q + ++FT+ + E KQ+ A K
Sbjct: 218 SSMVAGYVQNELYEEALVLFHRAQAMGLEHNQFTISSALSACAARAALIEGKQVQAVLCK 277
Query: 542 IAFDSNVYVGTALLDVYAKCELINYACRIFDSMTERSAVTWSSMISGYVQNNFHEEALML 721
SN++V ++L+D+YAKC +I A +F S+ E++ V W++M+SG+ ++ EA++
Sbjct: 278 TGIGSNIFVISSLIDMYAKCGIIEEAYIVFSSVEEKNVVLWNAMLSGFSRHVRSLEAMIY 337
Query: 722 FHKGQKVGAEQTQFT 766
F K Q++G + T
Sbjct: 338 FEKMQQMGICPNEIT 352
Score = 71.6 bits (174), Expect = 2e-10
Identities = 41/179 (22%), Positives = 87/179 (48%), Gaps = 2/179 (1%)
Frame = +2
Query: 149 NVVNLQALLQKCAVDKIVWEGKVLHGQVFQAGLQVDTLLSNIIINMYSKCGFVDSARQVF 328
N + + L CA + EGK + + + G+ + + + +I+MY+KCG ++ A VF
Sbjct: 248 NQFTISSALSACAARAALIEGKQVQAVLCKTGIGSNIFVISSLIDMYAKCGIIEEAYIVF 307
Query: 329 DRMPERSLVSWNTMIGAHTKHGEEDEGLNLFMQMQREQVPPSEFTLXXXXXXXXXXXXVY 508
+ E+++V WN M+ ++H E + F +MQ+ + P+E T V
Sbjct: 308 SSVEEKNVVLWNAMLSGFSRHVRSLEAMIYFEKMQQMGICPNEITYISVLTACSHLGLVE 367
Query: 509 ESKQLHAFALKI-AFDSNVYVGTALLDVYAKCELINYACRIFDSMT-ERSAVTWSSMIS 679
+ ++ +++ NV + ++D+ + L++ A + D M + +A W S+++
Sbjct: 368 KGRKYFDLMIRVHNVSPNVLHYSCMVDILGRAGLLHEAKDLIDRMPFDATASMWGSLLA 426
>emb|CBI25024.3| unnamed protein product [Vitis vinifera]
Length = 621
Score = 264 bits (675), Expect = 2e-68
Identities = 133/250 (53%), Positives = 171/250 (68%)
Frame = +2
Query: 149 NVVNLQALLQKCAVDKIVWEGKVLHGQVFQAGLQVDTLLSNIIINMYSKCGFVDSARQVF 328
+V LQ LLQ A ++ EG H Q+ + GL+ DT+ SN+++NMYSKCG V+SAR++F
Sbjct: 46 HVSELQHLLQSSARNRAAIEGMACHAQIIRVGLRADTITSNMLMNMYSKCGLVESARKLF 105
Query: 329 DRMPERSLVSWNTMIGAHTKHGEEDEGLNLFMQMQREQVPPSEFTLXXXXXXXXXXXXVY 508
D MP RSLVSWNTM+G+HT++G+ ++ L LFMQMQ+E SEFT+ V+
Sbjct: 106 DEMPVRSLVSWNTMVGSHTQNGDCEKALVLFMQMQKEGTSCSEFTVSSVVCACAAKCCVF 165
Query: 509 ESKQLHAFALKIAFDSNVYVGTALLDVYAKCELINYACRIFDSMTERSAVTWSSMISGYV 688
E KQLH FALK A DSNV+VGTALLDVYAKC L+ A +F+ M ERS VTWSSM++GYV
Sbjct: 166 ECKQLHGFALKTALDSNVFVGTALLDVYAKCGLVKDANLVFECMPERSDVTWSSMVAGYV 225
Query: 689 QNNFHEEALMLFHKGQKVGAEQTQFTXXXXXXXXXXXXXXIEGNQIHAILVRTGYGLNLF 868
QN +EEAL+LFH+ Q +G E QFT IEG Q+ A+ +TG G N+F
Sbjct: 226 QNELYEEALVLFHRAQAMGLEHNQFTISSALSACAARAALIEGKQVQAVSCKTGIGSNIF 285
Query: 869 VSASLIDMYA 898
V +SLIDMYA
Sbjct: 286 VISSLIDMYA 295
Score = 121 bits (304), Expect = 2e-25
Identities = 61/188 (32%), Positives = 109/188 (57%)
Frame = +2
Query: 182 CAVDKIVWEGKVLHGQVFQAGLQVDTLLSNIIINMYSKCGFVDSARQVFDRMPERSLVSW 361
CA V+E K LHG + L + + ++++Y+KCG V A VF+ MPERS V+W
Sbjct: 158 CAAKCCVFECKQLHGFALKTALDSNVFVGTALLDVYAKCGLVKDANLVFECMPERSDVTW 217
Query: 362 NTMIGAHTKHGEEDEGLNLFMQMQREQVPPSEFTLXXXXXXXXXXXXVYESKQLHAFALK 541
++M+ + ++ +E L LF + Q + ++FT+ + E KQ+ A + K
Sbjct: 218 SSMVAGYVQNELYEEALVLFHRAQAMGLEHNQFTISSALSACAARAALIEGKQVQAVSCK 277
Query: 542 IAFDSNVYVGTALLDVYAKCELINYACRIFDSMTERSAVTWSSMISGYVQNNFHEEALML 721
SN++V ++L+D+YAKC +I A +F S+ E++ V W++++SG+ ++ EA++
Sbjct: 278 TGIGSNIFVISSLIDMYAKCGIIEEAYTVFSSVEEKNVVLWNAILSGFSRHVRSLEAMIY 337
Query: 722 FHKGQKVG 745
F K Q++G
Sbjct: 338 FEKMQQMG 345
Score = 67.8 bits (164), Expect = 3e-09
Identities = 39/179 (21%), Positives = 85/179 (47%), Gaps = 2/179 (1%)
Frame = +2
Query: 149 NVVNLQALLQKCAVDKIVWEGKVLHGQVFQAGLQVDTLLSNIIINMYSKCGFVDSARQVF 328
N + + L CA + EGK + + G+ + + + +I+MY+KCG ++ A VF
Sbjct: 248 NQFTISSALSACAARAALIEGKQVQAVSCKTGIGSNIFVISSLIDMYAKCGIIEEAYTVF 307
Query: 329 DRMPERSLVSWNTMIGAHTKHGEEDEGLNLFMQMQREQVPPSEFTLXXXXXXXXXXXXVY 508
+ E+++V WN ++ ++H E + F +MQ+ + P++ T V
Sbjct: 308 SSVEEKNVVLWNAILSGFSRHVRSLEAMIYFEKMQQMGICPNDITYISVLSACSHLGLVE 367
Query: 509 ESKQLHAFALKI-AFDSNVYVGTALLDVYAKCELINYACRIFDSMT-ERSAVTWSSMIS 679
+ ++ +++ NV + ++D+ + L++ A D M + +A W S+++
Sbjct: 368 KGRKYFDLMIRVHNVSPNVLHYSCMVDILGRAGLLHEAKDFIDRMPFDATASMWGSLLA 426
>ref|XP_002269452.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g04780-like [Vitis vinifera]
Length = 594
Score = 264 bits (675), Expect = 2e-68
Identities = 133/250 (53%), Positives = 171/250 (68%)
Frame = +2
Query: 149 NVVNLQALLQKCAVDKIVWEGKVLHGQVFQAGLQVDTLLSNIIINMYSKCGFVDSARQVF 328
+V LQ LLQ A ++ EG H Q+ + GL+ DT+ SN+++NMYSKCG V+SAR++F
Sbjct: 19 HVSELQHLLQSSARNRAAIEGMACHAQIIRVGLRADTITSNMLMNMYSKCGLVESARKLF 78
Query: 329 DRMPERSLVSWNTMIGAHTKHGEEDEGLNLFMQMQREQVPPSEFTLXXXXXXXXXXXXVY 508
D MP RSLVSWNTM+G+HT++G+ ++ L LFMQMQ+E SEFT+ V+
Sbjct: 79 DEMPVRSLVSWNTMVGSHTQNGDCEKALVLFMQMQKEGTSCSEFTVSSVVCACAAKCCVF 138
Query: 509 ESKQLHAFALKIAFDSNVYVGTALLDVYAKCELINYACRIFDSMTERSAVTWSSMISGYV 688
E KQLH FALK A DSNV+VGTALLDVYAKC L+ A +F+ M ERS VTWSSM++GYV
Sbjct: 139 ECKQLHGFALKTALDSNVFVGTALLDVYAKCGLVKDANLVFECMPERSDVTWSSMVAGYV 198
Query: 689 QNNFHEEALMLFHKGQKVGAEQTQFTXXXXXXXXXXXXXXIEGNQIHAILVRTGYGLNLF 868
QN +EEAL+LFH+ Q +G E QFT IEG Q+ A+ +TG G N+F
Sbjct: 199 QNELYEEALVLFHRAQAMGLEHNQFTISSALSACAARAALIEGKQVQAVSCKTGIGSNIF 258
Query: 869 VSASLIDMYA 898
V +SLIDMYA
Sbjct: 259 VISSLIDMYA 268
Score = 121 bits (304), Expect = 2e-25
Identities = 61/188 (32%), Positives = 109/188 (57%)
Frame = +2
Query: 182 CAVDKIVWEGKVLHGQVFQAGLQVDTLLSNIIINMYSKCGFVDSARQVFDRMPERSLVSW 361
CA V+E K LHG + L + + ++++Y+KCG V A VF+ MPERS V+W
Sbjct: 131 CAAKCCVFECKQLHGFALKTALDSNVFVGTALLDVYAKCGLVKDANLVFECMPERSDVTW 190
Query: 362 NTMIGAHTKHGEEDEGLNLFMQMQREQVPPSEFTLXXXXXXXXXXXXVYESKQLHAFALK 541
++M+ + ++ +E L LF + Q + ++FT+ + E KQ+ A + K
Sbjct: 191 SSMVAGYVQNELYEEALVLFHRAQAMGLEHNQFTISSALSACAARAALIEGKQVQAVSCK 250
Query: 542 IAFDSNVYVGTALLDVYAKCELINYACRIFDSMTERSAVTWSSMISGYVQNNFHEEALML 721
SN++V ++L+D+YAKC +I A +F S+ E++ V W++++SG+ ++ EA++
Sbjct: 251 TGIGSNIFVISSLIDMYAKCGIIEEAYTVFSSVEEKNVVLWNAILSGFSRHVRSLEAMIY 310
Query: 722 FHKGQKVG 745
F K Q++G
Sbjct: 311 FEKMQQMG 318
Score = 67.8 bits (164), Expect = 3e-09
Identities = 39/179 (21%), Positives = 85/179 (47%), Gaps = 2/179 (1%)
Frame = +2
Query: 149 NVVNLQALLQKCAVDKIVWEGKVLHGQVFQAGLQVDTLLSNIIINMYSKCGFVDSARQVF 328
N + + L CA + EGK + + G+ + + + +I+MY+KCG ++ A VF
Sbjct: 221 NQFTISSALSACAARAALIEGKQVQAVSCKTGIGSNIFVISSLIDMYAKCGIIEEAYTVF 280
Query: 329 DRMPERSLVSWNTMIGAHTKHGEEDEGLNLFMQMQREQVPPSEFTLXXXXXXXXXXXXVY 508
+ E+++V WN ++ ++H E + F +MQ+ + P++ T V
Sbjct: 281 SSVEEKNVVLWNAILSGFSRHVRSLEAMIYFEKMQQMGICPNDITYISVLSACSHLGLVE 340
Query: 509 ESKQLHAFALKI-AFDSNVYVGTALLDVYAKCELINYACRIFDSMT-ERSAVTWSSMIS 679
+ ++ +++ NV + ++D+ + L++ A D M + +A W S+++
Sbjct: 341 KGRKYFDLMIRVHNVSPNVLHYSCMVDILGRAGLLHEAKDFIDRMPFDATASMWGSLLA 399
>ref|XP_003555883.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g04780-like [Glycine max]
Length = 618
Score = 248 bits (634), Expect = 1e-63
Identities = 126/249 (50%), Positives = 166/249 (66%)
Frame = +2
Query: 152 VVNLQALLQKCAVDKIVWEGKVLHGQVFQAGLQVDTLLSNIIINMYSKCGFVDSARQVFD 331
V NL LLQ CA + G+ H Q+ + GL++D L SN++INMYSKC VDSAR+ F+
Sbjct: 43 VSNLHYLLQLCAKTRSSMGGRACHAQIIRIGLEMDILTSNMLINMYSKCSLVDSARKKFN 102
Query: 332 RMPERSLVSWNTMIGAHTKHGEEDEGLNLFMQMQREQVPPSEFTLXXXXXXXXXXXXVYE 511
MP +SLVSWNT+IGA T++ E+ E L L +QMQRE P +EFT+ + E
Sbjct: 103 EMPVKSLVSWNTVIGALTQNAEDREALKLLIQMQREGTPFNEFTISSVLCNCAFKCAILE 162
Query: 512 SKQLHAFALKIAFDSNVYVGTALLDVYAKCELINYACRIFDSMTERSAVTWSSMISGYVQ 691
QLHAF++K A DSN +VGTALL VYAKC I A ++F+SM E++AVTWSSM++GYVQ
Sbjct: 163 CMQLHAFSIKAAIDSNCFVGTALLHVYAKCSSIKDASQMFESMPEKNAVTWSSMMAGYVQ 222
Query: 692 NNFHEEALMLFHKGQKVGAEQTQFTXXXXXXXXXXXXXXIEGNQIHAILVRTGYGLNLFV 871
N FHEEAL++F Q +G +Q F IEG Q+HAI ++G+G N++V
Sbjct: 223 NGFHEEALLIFRNAQLMGFDQDPFMISSAVSACAGLATLIEGKQVHAISHKSGFGSNIYV 282
Query: 872 SASLIDMYA 898
S+SLIDMYA
Sbjct: 283 SSSLIDMYA 291
Score = 119 bits (298), Expect = 1e-24
Identities = 67/233 (28%), Positives = 116/233 (49%), Gaps = 1/233 (0%)
Frame = +2
Query: 149 NVVNLQALLQKCAVDKIVWEGKVLHGQVFQAGLQVDTLLSNIIINMYSKCGFVDSARQVF 328
N + ++L CA + E LH +A + + + ++++Y+KC + A Q+F
Sbjct: 143 NEFTISSVLCNCAFKCAILECMQLHAFSIKAAIDSNCFVGTALLHVYAKCSSIKDASQMF 202
Query: 329 DRMPERSLVSWNTMIGAHTKHGEEDEGLNLFMQMQREQVPPSEFTLXXXXXXXXXXXXVY 508
+ MPE++ V+W++M+ + ++G +E L +F Q F + +
Sbjct: 203 ESMPEKNAVTWSSMMAGYVQNGFHEEALLIFRNAQLMGFDQDPFMISSAVSACAGLATLI 262
Query: 509 ESKQLHAFALKIAFDSNVYVGTALLDVYAKCELINYACRIFDSMTE-RSAVTWSSMISGY 685
E KQ+HA + K F SN+YV ++L+D+YAKC I A +F + E RS V W++MISG+
Sbjct: 263 EGKQVHAISHKSGFGSNIYVSSSLIDMYAKCGCIREAYLVFQGVLEVRSIVLWNAMISGF 322
Query: 686 VQNNFHEEALMLFHKGQKVGAEQTQFTXXXXXXXXXXXXXXIEGNQIHAILVR 844
++ EA++LF K Q+ G T EG + ++VR
Sbjct: 323 ARHARAPEAMILFEKMQQRGFFPDDVTYVCVLNACSHMGLHEEGQKYFDLMVR 375
>ref|XP_004159483.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g04780-like [Cucumis sativus]
Length = 638
Score = 248 bits (632), Expect = 2e-63
Identities = 127/243 (52%), Positives = 164/243 (67%)
Frame = +2
Query: 170 LLQKCAVDKIVWEGKVLHGQVFQAGLQVDTLLSNIIINMYSKCGFVDSARQVFDRMPERS 349
+L+ CA K++ +GK H Q+ GL+ D L SNI+INMYSKCG VD ARQVFD MP RS
Sbjct: 70 ILKLCAKRKLLLQGKACHAQILLMGLKTDLLTSNILINMYSKCGSVDFARQVFDEMPSRS 129
Query: 350 LVSWNTMIGAHTKHGEEDEGLNLFMQMQREQVPPSEFTLXXXXXXXXXXXXVYESKQLHA 529
LVSWNTMIG+ T++GEE+E L+L +QMQRE P SEFT+ + E + LHA
Sbjct: 130 LVSWNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACAAKCALSECQLLHA 189
Query: 530 FALKIAFDSNVYVGTALLDVYAKCELINYACRIFDSMTERSAVTWSSMISGYVQNNFHEE 709
FA+K A D NV+V TALLDVYAKC L+ A +F+SM +RS VTWSSM +GYVQN +E+
Sbjct: 190 FAIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMPDRSVVTWSSMAAGYVQNEMYEQ 249
Query: 710 ALMLFHKGQKVGAEQTQFTXXXXXXXXXXXXXXIEGNQIHAILVRTGYGLNLFVSASLID 889
AL LF K + G + QF IEG Q++A+L ++G+ N+FV++SLID
Sbjct: 250 ALALFRKAWETGLKHDQFLMSSVICACAGLAAMIEGKQVNALLSKSGFCSNIFVASSLID 309
Query: 890 MYA 898
MYA
Sbjct: 310 MYA 312
Score = 112 bits (280), Expect = 1e-22
Identities = 56/202 (27%), Positives = 112/202 (55%)
Frame = +2
Query: 161 LQALLQKCAVDKIVWEGKVLHGQVFQAGLQVDTLLSNIIINMYSKCGFVDSARQVFDRMP 340
+ ++L CA + E ++LH +A + ++ ++ ++++Y+KCG + A VF+ MP
Sbjct: 168 ISSVLCACAAKCALSECQLLHAFAIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMP 227
Query: 341 ERSLVSWNTMIGAHTKHGEEDEGLNLFMQMQREQVPPSEFTLXXXXXXXXXXXXVYESKQ 520
+RS+V+W++M + ++ ++ L LF + + +F + + E KQ
Sbjct: 228 DRSVVTWSSMAAGYVQNEMYEQALALFRKAWETGLKHDQFLMSSVICACAGLAAMIEGKQ 287
Query: 521 LHAFALKIAFDSNVYVGTALLDVYAKCELINYACRIFDSMTERSAVTWSSMISGYVQNNF 700
++A K F SN++V ++L+D+YAKC I + ++F + +R+ V W++MISG ++
Sbjct: 288 VNALLSKSGFCSNIFVASSLIDMYAKCGGIEESYKVFRDVEKRNVVLWNAMISGLSRHAR 347
Query: 701 HEEALMLFHKGQKVGAEQTQFT 766
E ++LF K Q++G T
Sbjct: 348 SLEVMILFEKMQQMGLSPNDVT 369