BLASTX nr result

ID: Coptis24_contig00025392 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00025392
         (315 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271743.2| PREDICTED: histidine kinase 5-like [Vitis vi...   110   1e-22
emb|CBI23998.3| unnamed protein product [Vitis vinifera]              110   1e-22
emb|CAN76109.1| hypothetical protein VITISV_033090 [Vitis vinifera]   110   1e-22
ref|XP_003523664.1| PREDICTED: histidine kinase 5-like [Glycine ...    99   3e-19
ref|XP_002324940.1| histidine kinase cytokinin receptor [Populus...    99   3e-19

>ref|XP_002271743.2| PREDICTED: histidine kinase 5-like [Vitis vinifera]
          Length = 1012

 Score =  110 bits (275), Expect = 1e-22
 Identities = 54/75 (72%), Positives = 63/75 (84%)
 Frame = +2

Query: 2    WDAAIEAGIDRLEPSSESSTNSLDAVPPTKRIPIIAMTANALSESADECRANGMDSFVSK 181
            WDAA++AGI+    SS+S  N  D++  TKR+PIIAMTANALSESADEC ANGMDSFVSK
Sbjct: 937  WDAAVKAGIEPSTCSSDSLPNGHDSMTVTKRVPIIAMTANALSESADECYANGMDSFVSK 996

Query: 182  PVTFQKLKECLQQYI 226
            PVTFQKL +CLQQY+
Sbjct: 997  PVTFQKLTQCLQQYL 1011


>emb|CBI23998.3| unnamed protein product [Vitis vinifera]
          Length = 803

 Score =  110 bits (275), Expect = 1e-22
 Identities = 54/75 (72%), Positives = 63/75 (84%)
 Frame = +2

Query: 2   WDAAIEAGIDRLEPSSESSTNSLDAVPPTKRIPIIAMTANALSESADECRANGMDSFVSK 181
           WDAA++AGI+    SS+S  N  D++  TKR+PIIAMTANALSESADEC ANGMDSFVSK
Sbjct: 728 WDAAVKAGIEPSTCSSDSLPNGHDSMTVTKRVPIIAMTANALSESADECYANGMDSFVSK 787

Query: 182 PVTFQKLKECLQQYI 226
           PVTFQKL +CLQQY+
Sbjct: 788 PVTFQKLTQCLQQYL 802


>emb|CAN76109.1| hypothetical protein VITISV_033090 [Vitis vinifera]
          Length = 979

 Score =  110 bits (275), Expect = 1e-22
 Identities = 54/75 (72%), Positives = 63/75 (84%)
 Frame = +2

Query: 2    WDAAIEAGIDRLEPSSESSTNSLDAVPPTKRIPIIAMTANALSESADECRANGMDSFVSK 181
            WDAA++AGI+    SS+S  N  D++  TKR+PIIAMTANALSESADEC ANGMDSFVSK
Sbjct: 904  WDAAVKAGIEPSTCSSDSLPNGHDSMXVTKRVPIIAMTANALSESADECYANGMDSFVSK 963

Query: 182  PVTFQKLKECLQQYI 226
            PVTFQKL +CLQQY+
Sbjct: 964  PVTFQKLTQCLQQYL 978


>ref|XP_003523664.1| PREDICTED: histidine kinase 5-like [Glycine max]
          Length = 933

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 52/77 (67%), Positives = 60/77 (77%), Gaps = 2/77 (2%)
 Frame = +2

Query: 2    WDAAIEAGIDRL--EPSSESSTNSLDAVPPTKRIPIIAMTANALSESADECRANGMDSFV 175
            WDAA  AGI++   +P  E S      VP TKRIPI+AMTANALSESA+EC ANGMDSFV
Sbjct: 859  WDAARNAGIEQSVQDPDCECS------VPSTKRIPIVAMTANALSESAEECFANGMDSFV 912

Query: 176  SKPVTFQKLKECLQQYI 226
            SKPV FQKLKEC++QY+
Sbjct: 913  SKPVAFQKLKECIEQYL 929


>ref|XP_002324940.1| histidine kinase cytokinin receptor [Populus trichocarpa]
            gi|222866374|gb|EEF03505.1| histidine kinase cytokinin
            receptor [Populus trichocarpa]
          Length = 945

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 53/75 (70%), Positives = 62/75 (82%)
 Frame = +2

Query: 2    WDAAIEAGIDRLEPSSESSTNSLDAVPPTKRIPIIAMTANALSESADECRANGMDSFVSK 181
            WDAA +AGI   EPS+ S  +S  ++   KR+PIIAMTANALSESA+EC ANGMDSFVSK
Sbjct: 875  WDAAAKAGI---EPSA-SLQDSQSSIHYDKRMPIIAMTANALSESAEECYANGMDSFVSK 930

Query: 182  PVTFQKLKECLQQYI 226
            PVTFQKLKECL+QY+
Sbjct: 931  PVTFQKLKECLEQYL 945


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