BLASTX nr result

ID: Coptis24_contig00025371 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00025371
         (501 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002533657.1| conserved hypothetical protein [Ricinus comm...    64   2e-08
ref|NP_001236374.1| uncharacterized protein LOC100527716 [Glycin...    62   5e-08
ref|NP_197230.1| uncharacterized protein [Arabidopsis thaliana] ...    61   1e-07
ref|XP_002310835.1| predicted protein [Populus trichocarpa] gi|2...    60   1e-07
gb|ABK92656.1| unknown [Populus trichocarpa]                           60   1e-07

>ref|XP_002533657.1| conserved hypothetical protein [Ricinus communis]
           gi|223526452|gb|EEF28728.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 72

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 24/28 (85%), Positives = 26/28 (92%)
 Frame = +3

Query: 291 GDCCGSGCVRCVWDIYYDELEEYNNLVQ 374
           GDCCGSGCVRCVWD+YY+ELEEYN L Q
Sbjct: 37  GDCCGSGCVRCVWDVYYEELEEYNKLYQ 64


>ref|NP_001236374.1| uncharacterized protein LOC100527716 [Glycine max]
           gi|255633034|gb|ACU16872.1| unknown [Glycine max]
          Length = 117

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 23/24 (95%), Positives = 24/24 (100%)
 Frame = +3

Query: 291 GDCCGSGCVRCVWDIYYDELEEYN 362
           GDCCGSGCVRCVWD+YYDELEEYN
Sbjct: 80  GDCCGSGCVRCVWDVYYDELEEYN 103


>ref|NP_197230.1| uncharacterized protein [Arabidopsis thaliana]
           gi|10177073|dbj|BAB10515.1| unnamed protein product
           [Arabidopsis thaliana] gi|17979262|gb|AAL49947.1|
           AT5g17280/MKP11_13 [Arabidopsis thaliana]
           gi|20147183|gb|AAM10308.1| AT5g17280/MKP11_13
           [Arabidopsis thaliana] gi|21592698|gb|AAM64647.1|
           unknown [Arabidopsis thaliana]
           gi|332005025|gb|AED92408.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 135

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 22/24 (91%), Positives = 24/24 (100%)
 Frame = +3

Query: 291 GDCCGSGCVRCVWDIYYDELEEYN 362
           GDCCGSGCVRCVWD+YYDELE+YN
Sbjct: 102 GDCCGSGCVRCVWDVYYDELEDYN 125


>ref|XP_002310835.1| predicted protein [Populus trichocarpa] gi|222853738|gb|EEE91285.1|
           predicted protein [Populus trichocarpa]
          Length = 74

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 22/32 (68%), Positives = 28/32 (87%)
 Frame = +3

Query: 291 GDCCGSGCVRCVWDIYYDELEEYNNLVQKKNT 386
           GDCCGSGCVRCVWD+YY+ELEEY+ L +  ++
Sbjct: 41  GDCCGSGCVRCVWDVYYEELEEYDKLYKSDSS 72


>gb|ABK92656.1| unknown [Populus trichocarpa]
          Length = 142

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 22/32 (68%), Positives = 28/32 (87%)
 Frame = +3

Query: 291 GDCCGSGCVRCVWDIYYDELEEYNNLVQKKNT 386
           GDCCGSGCVRCVWD+YY+ELEEY+ L +  ++
Sbjct: 109 GDCCGSGCVRCVWDVYYEELEEYDKLYKSDSS 140


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