BLASTX nr result

ID: Coptis24_contig00025181 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00025181
         (879 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002313412.1| copper transporter [Populus trichocarpa] gi|...   184   2e-44
ref|XP_002280121.1| PREDICTED: copper transporter 6 [Vitis vinif...   174   3e-41
emb|CBI16036.3| unnamed protein product [Vitis vinifera]              172   1e-40
ref|XP_002280132.1| PREDICTED: copper transporter 1 [Vitis vinif...   172   1e-40
ref|XP_002313411.1| copper transporter [Populus trichocarpa] gi|...   162   7e-38

>ref|XP_002313412.1| copper transporter [Populus trichocarpa]
           gi|222849820|gb|EEE87367.1| copper transporter [Populus
           trichocarpa]
          Length = 155

 Score =  184 bits (468), Expect = 2e-44
 Identities = 84/119 (70%), Positives = 102/119 (85%)
 Frame = -2

Query: 563 FFWGKHSEILFSGWPGTSTGMYVLSLIVVFFLSMSIEWLSHSRYIKPGSSHVSAGLVQTL 384
           FFWGK + ILFSGWPGTSTGMYVL+L+ +F L++ +EWLSH R +KPGS++V+AGL+Q L
Sbjct: 34  FFWGKDTLILFSGWPGTSTGMYVLALVFIFVLAVLVEWLSHCRLVKPGSNNVAAGLIQAL 93

Query: 383 MHMIRVGLSYLVMLAVMSFNGGVFLVAVAGHSVGFFIFGSRVFKPEEVAQYEKQRDIPP 207
           MH +RVGL+Y+VMLAVMSFNGGVF+VAVAGH VGFFIFGSRVFK  E+  Y K  D+PP
Sbjct: 94  MHAVRVGLAYMVMLAVMSFNGGVFIVAVAGHLVGFFIFGSRVFKDTEMPPYHKTSDLPP 152


>ref|XP_002280121.1| PREDICTED: copper transporter 6 [Vitis vinifera]
           gi|321496078|gb|ADW93916.1| copper transporter [Vitis
           vinifera]
          Length = 151

 Score =  174 bits (440), Expect = 3e-41
 Identities = 82/137 (59%), Positives = 103/137 (75%)
 Frame = -2

Query: 620 SNSNGXXXXXXXXXXXXXTFFWGKHSEILFSGWPGTSTGMYVLSLIVVFFLSMSIEWLSH 441
           +NS G             TF+WGK +EILFSGWPG  +GMY L+LIVVF + + +EWLS+
Sbjct: 15  ANSTGMSPMHHMEMMMHMTFYWGKEAEILFSGWPGARSGMYALALIVVFVMGIIVEWLSY 74

Query: 440 SRYIKPGSSHVSAGLVQTLMHMIRVGLSYLVMLAVMSFNGGVFLVAVAGHSVGFFIFGSR 261
            R IKPGS+H +AGLVQTL+H IR+GL+Y+VMLA+MSFNGGVFLVAVAGH+VGF +FGSR
Sbjct: 75  CRLIKPGSTHAAAGLVQTLLHTIRIGLAYMVMLALMSFNGGVFLVAVAGHAVGFLVFGSR 134

Query: 260 VFKPEEVAQYEKQRDIP 210
           V +  E+   EK  D+P
Sbjct: 135 VCRGSEMVSLEKTSDLP 151


>emb|CBI16036.3| unnamed protein product [Vitis vinifera]
          Length = 160

 Score =  172 bits (435), Expect = 1e-40
 Identities = 83/142 (58%), Positives = 108/142 (76%), Gaps = 1/142 (0%)
 Frame = -2

Query: 620 SNSNGXXXXXXXXXXXXXTFFWGKHSEILFSGWPGTSTGMYVLSLIVVFFLSMSIEWLSH 441
           +NS G             TF+WGK +EILFSGWPGT +GMY L+LIVVF +++ +EWLSH
Sbjct: 19  ANSTGMPPMHHMEMMMHMTFYWGKKAEILFSGWPGTRSGMYALALIVVFVMAIIVEWLSH 78

Query: 440 SRYIKPGSSHVSAGLVQTLMHMIRVGLSYLVMLAVMSFNGGVFLVAVAGHSVGFFIFGSR 261
            + IKPGS+HV+AG+VQTL+H IR+GL Y+VMLA+MSFNGG+FLVAVAGH+VGF +FGSR
Sbjct: 79  FQLIKPGSTHVAAGVVQTLLHAIRMGLEYMVMLALMSFNGGMFLVAVAGHAVGFLVFGSR 138

Query: 260 VFKPEEVAQ-YEKQRDIPPMTC 198
           +F+  E  +  EK   + PM+C
Sbjct: 139 LFRGSETLRPSEKAFYLSPMSC 160


>ref|XP_002280132.1| PREDICTED: copper transporter 1 [Vitis vinifera]
           gi|321496076|gb|ADW93915.1| copper transporter [Vitis
           vinifera]
          Length = 177

 Score =  172 bits (435), Expect = 1e-40
 Identities = 83/142 (58%), Positives = 108/142 (76%), Gaps = 1/142 (0%)
 Frame = -2

Query: 620 SNSNGXXXXXXXXXXXXXTFFWGKHSEILFSGWPGTSTGMYVLSLIVVFFLSMSIEWLSH 441
           +NS G             TF+WGK +EILFSGWPGT +GMY L+LIVVF +++ +EWLSH
Sbjct: 36  ANSTGMPPMHHMEMMMHMTFYWGKKAEILFSGWPGTRSGMYALALIVVFVMAIIVEWLSH 95

Query: 440 SRYIKPGSSHVSAGLVQTLMHMIRVGLSYLVMLAVMSFNGGVFLVAVAGHSVGFFIFGSR 261
            + IKPGS+HV+AG+VQTL+H IR+GL Y+VMLA+MSFNGG+FLVAVAGH+VGF +FGSR
Sbjct: 96  FQLIKPGSTHVAAGVVQTLLHAIRMGLEYMVMLALMSFNGGMFLVAVAGHAVGFLVFGSR 155

Query: 260 VFKPEEVAQ-YEKQRDIPPMTC 198
           +F+  E  +  EK   + PM+C
Sbjct: 156 LFRGSETLRPSEKAFYLSPMSC 177


>ref|XP_002313411.1| copper transporter [Populus trichocarpa]
           gi|118485983|gb|ABK94836.1| unknown [Populus
           trichocarpa] gi|222849819|gb|EEE87366.1| copper
           transporter [Populus trichocarpa]
          Length = 162

 Score =  162 bits (411), Expect = 7e-38
 Identities = 78/125 (62%), Positives = 98/125 (78%), Gaps = 3/125 (2%)
 Frame = -2

Query: 563 FFWGKHSEILFSGWPGTSTG---MYVLSLIVVFFLSMSIEWLSHSRYIKPGSSHVSAGLV 393
           FFWGK +EILFSGWPG+S     MY ++L+ VF LS+ +EWLSH + +KPGS+HV+AGLV
Sbjct: 40  FFWGKSTEILFSGWPGSSDKRPHMYFVALLFVFVLSILVEWLSHCQLMKPGSNHVAAGLV 99

Query: 392 QTLMHMIRVGLSYLVMLAVMSFNGGVFLVAVAGHSVGFFIFGSRVFKPEEVAQYEKQRDI 213
           QTL+H +RVGL+Y+VMLA+MSFNGGVFL AVAGH++GF  FGSRVFK        K  D+
Sbjct: 100 QTLLHALRVGLAYMVMLAIMSFNGGVFLAAVAGHTLGFLFFGSRVFK--RTQNPAKTSDL 157

Query: 212 PPMTC 198
           PP +C
Sbjct: 158 PPSSC 162


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