BLASTX nr result
ID: Coptis24_contig00025181
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00025181 (879 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002313412.1| copper transporter [Populus trichocarpa] gi|... 184 2e-44 ref|XP_002280121.1| PREDICTED: copper transporter 6 [Vitis vinif... 174 3e-41 emb|CBI16036.3| unnamed protein product [Vitis vinifera] 172 1e-40 ref|XP_002280132.1| PREDICTED: copper transporter 1 [Vitis vinif... 172 1e-40 ref|XP_002313411.1| copper transporter [Populus trichocarpa] gi|... 162 7e-38 >ref|XP_002313412.1| copper transporter [Populus trichocarpa] gi|222849820|gb|EEE87367.1| copper transporter [Populus trichocarpa] Length = 155 Score = 184 bits (468), Expect = 2e-44 Identities = 84/119 (70%), Positives = 102/119 (85%) Frame = -2 Query: 563 FFWGKHSEILFSGWPGTSTGMYVLSLIVVFFLSMSIEWLSHSRYIKPGSSHVSAGLVQTL 384 FFWGK + ILFSGWPGTSTGMYVL+L+ +F L++ +EWLSH R +KPGS++V+AGL+Q L Sbjct: 34 FFWGKDTLILFSGWPGTSTGMYVLALVFIFVLAVLVEWLSHCRLVKPGSNNVAAGLIQAL 93 Query: 383 MHMIRVGLSYLVMLAVMSFNGGVFLVAVAGHSVGFFIFGSRVFKPEEVAQYEKQRDIPP 207 MH +RVGL+Y+VMLAVMSFNGGVF+VAVAGH VGFFIFGSRVFK E+ Y K D+PP Sbjct: 94 MHAVRVGLAYMVMLAVMSFNGGVFIVAVAGHLVGFFIFGSRVFKDTEMPPYHKTSDLPP 152 >ref|XP_002280121.1| PREDICTED: copper transporter 6 [Vitis vinifera] gi|321496078|gb|ADW93916.1| copper transporter [Vitis vinifera] Length = 151 Score = 174 bits (440), Expect = 3e-41 Identities = 82/137 (59%), Positives = 103/137 (75%) Frame = -2 Query: 620 SNSNGXXXXXXXXXXXXXTFFWGKHSEILFSGWPGTSTGMYVLSLIVVFFLSMSIEWLSH 441 +NS G TF+WGK +EILFSGWPG +GMY L+LIVVF + + +EWLS+ Sbjct: 15 ANSTGMSPMHHMEMMMHMTFYWGKEAEILFSGWPGARSGMYALALIVVFVMGIIVEWLSY 74 Query: 440 SRYIKPGSSHVSAGLVQTLMHMIRVGLSYLVMLAVMSFNGGVFLVAVAGHSVGFFIFGSR 261 R IKPGS+H +AGLVQTL+H IR+GL+Y+VMLA+MSFNGGVFLVAVAGH+VGF +FGSR Sbjct: 75 CRLIKPGSTHAAAGLVQTLLHTIRIGLAYMVMLALMSFNGGVFLVAVAGHAVGFLVFGSR 134 Query: 260 VFKPEEVAQYEKQRDIP 210 V + E+ EK D+P Sbjct: 135 VCRGSEMVSLEKTSDLP 151 >emb|CBI16036.3| unnamed protein product [Vitis vinifera] Length = 160 Score = 172 bits (435), Expect = 1e-40 Identities = 83/142 (58%), Positives = 108/142 (76%), Gaps = 1/142 (0%) Frame = -2 Query: 620 SNSNGXXXXXXXXXXXXXTFFWGKHSEILFSGWPGTSTGMYVLSLIVVFFLSMSIEWLSH 441 +NS G TF+WGK +EILFSGWPGT +GMY L+LIVVF +++ +EWLSH Sbjct: 19 ANSTGMPPMHHMEMMMHMTFYWGKKAEILFSGWPGTRSGMYALALIVVFVMAIIVEWLSH 78 Query: 440 SRYIKPGSSHVSAGLVQTLMHMIRVGLSYLVMLAVMSFNGGVFLVAVAGHSVGFFIFGSR 261 + IKPGS+HV+AG+VQTL+H IR+GL Y+VMLA+MSFNGG+FLVAVAGH+VGF +FGSR Sbjct: 79 FQLIKPGSTHVAAGVVQTLLHAIRMGLEYMVMLALMSFNGGMFLVAVAGHAVGFLVFGSR 138 Query: 260 VFKPEEVAQ-YEKQRDIPPMTC 198 +F+ E + EK + PM+C Sbjct: 139 LFRGSETLRPSEKAFYLSPMSC 160 >ref|XP_002280132.1| PREDICTED: copper transporter 1 [Vitis vinifera] gi|321496076|gb|ADW93915.1| copper transporter [Vitis vinifera] Length = 177 Score = 172 bits (435), Expect = 1e-40 Identities = 83/142 (58%), Positives = 108/142 (76%), Gaps = 1/142 (0%) Frame = -2 Query: 620 SNSNGXXXXXXXXXXXXXTFFWGKHSEILFSGWPGTSTGMYVLSLIVVFFLSMSIEWLSH 441 +NS G TF+WGK +EILFSGWPGT +GMY L+LIVVF +++ +EWLSH Sbjct: 36 ANSTGMPPMHHMEMMMHMTFYWGKKAEILFSGWPGTRSGMYALALIVVFVMAIIVEWLSH 95 Query: 440 SRYIKPGSSHVSAGLVQTLMHMIRVGLSYLVMLAVMSFNGGVFLVAVAGHSVGFFIFGSR 261 + IKPGS+HV+AG+VQTL+H IR+GL Y+VMLA+MSFNGG+FLVAVAGH+VGF +FGSR Sbjct: 96 FQLIKPGSTHVAAGVVQTLLHAIRMGLEYMVMLALMSFNGGMFLVAVAGHAVGFLVFGSR 155 Query: 260 VFKPEEVAQ-YEKQRDIPPMTC 198 +F+ E + EK + PM+C Sbjct: 156 LFRGSETLRPSEKAFYLSPMSC 177 >ref|XP_002313411.1| copper transporter [Populus trichocarpa] gi|118485983|gb|ABK94836.1| unknown [Populus trichocarpa] gi|222849819|gb|EEE87366.1| copper transporter [Populus trichocarpa] Length = 162 Score = 162 bits (411), Expect = 7e-38 Identities = 78/125 (62%), Positives = 98/125 (78%), Gaps = 3/125 (2%) Frame = -2 Query: 563 FFWGKHSEILFSGWPGTSTG---MYVLSLIVVFFLSMSIEWLSHSRYIKPGSSHVSAGLV 393 FFWGK +EILFSGWPG+S MY ++L+ VF LS+ +EWLSH + +KPGS+HV+AGLV Sbjct: 40 FFWGKSTEILFSGWPGSSDKRPHMYFVALLFVFVLSILVEWLSHCQLMKPGSNHVAAGLV 99 Query: 392 QTLMHMIRVGLSYLVMLAVMSFNGGVFLVAVAGHSVGFFIFGSRVFKPEEVAQYEKQRDI 213 QTL+H +RVGL+Y+VMLA+MSFNGGVFL AVAGH++GF FGSRVFK K D+ Sbjct: 100 QTLLHALRVGLAYMVMLAIMSFNGGVFLAAVAGHTLGFLFFGSRVFK--RTQNPAKTSDL 157 Query: 212 PPMTC 198 PP +C Sbjct: 158 PPSSC 162