BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00025158
         (1127 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI34639.3| unnamed protein product [Vitis vinifera]              250   5e-64
ref|XP_002518957.1| transporter, putative [Ricinus communis] gi|...   249   9e-64
ref|XP_002277144.1| PREDICTED: nuclear pore complex protein Nup9...   247   3e-63
ref|XP_002317654.1| predicted protein [Populus trichocarpa] gi|2...   246   8e-63
ref|XP_004148101.1| PREDICTED: nucleoporin nup189-like [Cucumis ...   245   2e-62

>emb|CBI34639.3| unnamed protein product [Vitis vinifera]
          Length = 1047

 Score =  250 bits (638), Expect = 5e-64
 Identities = 127/246 (51%), Positives = 168/246 (68%), Gaps = 9/246 (3%)
 Frame = +3

Query: 222  SAMPIYKDKTHEELRWEDSQLGAKEG-AAENGSDREQTNVARTDQRLN-------VHYGS 377
            ++ P++++    E     S  G K+    ENG  +E+ +  + +Q+ N       +  G 
Sbjct: 793  ASKPVHENGKVSEEGLNGSNAGDKDANLVENGLAKERIHTMKPNQKPNGVHDDHSIQKGD 852

Query: 378  AIAPIFG-KAGEAVLTYDHGAHIDVLMPKLKLTDYYSEPNIQELAAKEKAKPGFCGHVKD 554
            +   + G +AGEA + Y+HGA I+ LMPKL+ +DYY+EP IQELAAKE+A+PGFC  VKD
Sbjct: 853  SYITLTGHRAGEAAIVYEHGADIEALMPKLRRSDYYTEPRIQELAAKERAEPGFCRRVKD 912

Query: 555  FVVGRYGYGSIKFIGDTDVRGLDLGSLIHLNNREVVVYTDKSKMPSIGEGLNKPAEVTLL 734
            FVVGR+GYGSIKF+G+TDVR LDL SL+  NNREV+VY D SK P +G+GLNKPAEVTLL
Sbjct: 913  FVVGRHGYGSIKFMGETDVRRLDLESLVQFNNREVIVYMDDSKKPPVGQGLNKPAEVTLL 972

Query: 735  NIMCFDKKTGQQYTEGPXXXXXXXXXXXXTQEHGAEFISYEPSNGEWKFRVNHFFGHDQL 914
            NI CFDKKTG QYTEGP             ++ GAEF+SY+P  GEWKFRVNHF  + +L
Sbjct: 973  NIKCFDKKTGVQYTEGPKIGKYKEMLKRKAEDQGAEFVSYDPMKGEWKFRVNHFSKY-EL 1031

Query: 915  SNGKVD 932
             + ++D
Sbjct: 1032 GDEEID 1037



 Score = 90.9 bits (224), Expect = 5e-16
 Identities = 49/108 (45%), Positives = 64/108 (59%), Gaps = 1/108 (0%)
 Frame = +3

Query: 84  TATLGTRGVWPSSFGNQGRGGRVAGYSSTDDIDDGNGIQP-GMLKSVSAMPIYKDKTHEE 260
           T T G  G   S+FG Q  G RVA Y+ T ++D G+G QP G L+S+SAMP+YKDK+HEE
Sbjct: 318 TPTFGGTGFGQSAFGGQRGGSRVAAYTPTTEVDSGSGTQPVGKLESISAMPVYKDKSHEE 377

Query: 261 LRWEDSQLGAKEGAAENGSDREQTNVARTDQRLNVHYGSAIAPIFGKA 404
           LRWED QLG K G A             ++ + N     A +P FG++
Sbjct: 378 LRWEDYQLGDKGGPAPASQSTGGVGFGASNTQSNPF---AASPAFGQS 422


>ref|XP_002518957.1| transporter, putative [Ricinus communis] gi|223541944|gb|EEF43490.1|
            transporter, putative [Ricinus communis]
          Length = 957

 Score =  249 bits (636), Expect = 9e-64
 Identities = 121/208 (58%), Positives = 152/208 (73%), Gaps = 7/208 (3%)
 Frame = +3

Query: 294  EGAAENGSDREQTNVARTDQRLNVHYGSAIAP------IFG-KAGEAVLTYDHGAHIDVL 452
            E  +E+G  +E+ ++    +   VH  +++        + G +AGEA + Y+HGA I+ L
Sbjct: 723  ENMSEDGLSKERVHLKLNQKPNGVHEDNSVQKEELYMTLSGHRAGEAAIVYEHGADIEAL 782

Query: 453  MPKLKLTDYYSEPNIQELAAKEKAKPGFCGHVKDFVVGRYGYGSIKFIGDTDVRGLDLGS 632
            MPKL+ +DYY+EP IQELAAKE+A+PGFC HVKDFVVGR+GYGSIKF+G+TDVR LDL S
Sbjct: 783  MPKLRRSDYYTEPRIQELAAKERAEPGFCRHVKDFVVGRHGYGSIKFLGETDVRRLDLES 842

Query: 633  LIHLNNREVVVYTDKSKMPSIGEGLNKPAEVTLLNIMCFDKKTGQQYTEGPXXXXXXXXX 812
            L+  NNREV+VYTD SK P +G+GLNKPAEVTLLNI CFDKKTG+QYTEG          
Sbjct: 843  LVQFNNREVIVYTDDSKKPPVGQGLNKPAEVTLLNIKCFDKKTGRQYTEGAKIEKYKEML 902

Query: 813  XXXTQEHGAEFISYEPSNGEWKFRVNHF 896
                +E GAEF+SY+P  GEWKFRVNHF
Sbjct: 903  KRKAEEQGAEFVSYDPVKGEWKFRVNHF 930



 Score = 77.4 bits (189), Expect = 6e-12
 Identities = 46/107 (42%), Positives = 60/107 (56%), Gaps = 10/107 (9%)
 Frame = +3

Query: 72  PLGMTATLGTRGVWPSSFGNQG---------RGG-RVAGYSSTDDIDDGNGIQPGMLKSV 221
           P G ++  GT+   P+ FGN G         RGG RV  Y++T + D  +G QPG L+S+
Sbjct: 251 PFGTSSPFGTQATTPT-FGNTGFGQPAFAGNRGGSRVVPYTATAETDSSSG-QPGKLESI 308

Query: 222 SAMPIYKDKTHEELRWEDSQLGAKEGAAENGSDREQTNVARTDQRLN 362
           SAM +YKDK+HEELRWED Q G K G    G      N A +  + N
Sbjct: 309 SAMSVYKDKSHEELRWEDYQSGDKGGPVAPGQSSSGINFATSTAQSN 355


>ref|XP_002277144.1| PREDICTED: nuclear pore complex protein Nup98-Nup96-like isoform 1
            [Vitis vinifera]
          Length = 1013

 Score =  247 bits (631), Expect = 3e-63
 Identities = 122/217 (56%), Positives = 156/217 (71%), Gaps = 8/217 (3%)
 Frame = +3

Query: 306  ENGSDREQTNVARTDQRLN-------VHYGSAIAPIFG-KAGEAVLTYDHGAHIDVLMPK 461
            ENG  +E+ +  + +Q+ N       +  G +   + G +AGEA + Y+HGA I+ LMPK
Sbjct: 788  ENGLAKERIHTMKPNQKPNGVHDDHSIQKGDSYITLTGHRAGEAAIVYEHGADIEALMPK 847

Query: 462  LKLTDYYSEPNIQELAAKEKAKPGFCGHVKDFVVGRYGYGSIKFIGDTDVRGLDLGSLIH 641
            L+ +DYY+EP IQELAAKE+A+PGFC  VKDFVVGR+GYGSIKF+G+TDVR LDL SL+ 
Sbjct: 848  LRRSDYYTEPRIQELAAKERAEPGFCRRVKDFVVGRHGYGSIKFMGETDVRRLDLESLVQ 907

Query: 642  LNNREVVVYTDKSKMPSIGEGLNKPAEVTLLNIMCFDKKTGQQYTEGPXXXXXXXXXXXX 821
             NNREV+VY D SK P +G+GLNKPAEVTLLNI CFDKKTG QYTEGP            
Sbjct: 908  FNNREVIVYMDDSKKPPVGQGLNKPAEVTLLNIKCFDKKTGVQYTEGPKIGKYKEMLKRK 967

Query: 822  TQEHGAEFISYEPSNGEWKFRVNHFFGHDQLSNGKVD 932
             ++ GAEF+SY+P  GEWKFRVNHF  + +L + ++D
Sbjct: 968  AEDQGAEFVSYDPMKGEWKFRVNHFSKY-ELGDEEID 1003



 Score = 90.9 bits (224), Expect = 5e-16
 Identities = 49/108 (45%), Positives = 64/108 (59%), Gaps = 1/108 (0%)
 Frame = +3

Query: 84  TATLGTRGVWPSSFGNQGRGGRVAGYSSTDDIDDGNGIQP-GMLKSVSAMPIYKDKTHEE 260
           T T G  G   S+FG Q  G RVA Y+ T ++D G+G QP G L+S+SAMP+YKDK+HEE
Sbjct: 301 TPTFGGTGFGQSAFGGQRGGSRVAAYTPTTEVDSGSGTQPVGKLESISAMPVYKDKSHEE 360

Query: 261 LRWEDSQLGAKEGAAENGSDREQTNVARTDQRLNVHYGSAIAPIFGKA 404
           LRWED QLG K G A             ++ + N     A +P FG++
Sbjct: 361 LRWEDYQLGDKGGPAPASQSTGGVGFGASNTQSNPF---AASPAFGQS 405


>ref|XP_002317654.1| predicted protein [Populus trichocarpa] gi|222860719|gb|EEE98266.1|
            predicted protein [Populus trichocarpa]
          Length = 1007

 Score =  246 bits (628), Expect = 8e-63
 Identities = 130/256 (50%), Positives = 169/256 (66%), Gaps = 13/256 (5%)
 Frame = +3

Query: 222  SAMPIYKDKTHEELRWEDSQLGAKEG-----AAENGSDREQTNVARTDQRLN-VHYG--- 374
            ++ P++++  + E  + +   G   G      AENG  +EQ    + +Q+ N VH     
Sbjct: 750  ASAPVHENGKNSESDFANLSNGYTAGDKNKNLAENGVIKEQAPHVKVNQKPNGVHEDHSA 809

Query: 375  ----SAIAPIFGKAGEAVLTYDHGAHIDVLMPKLKLTDYYSEPNIQELAAKEKAKPGFCG 542
                S +     +AGEA + Y+HGA I+ LMPKL+ +DY++EP IQELAAKE+AKPGFC 
Sbjct: 810  QKEESYMTLSGHRAGEAAIVYEHGADIEALMPKLRRSDYFTEPRIQELAAKERAKPGFCR 869

Query: 543  HVKDFVVGRYGYGSIKFIGDTDVRGLDLGSLIHLNNREVVVYTDKSKMPSIGEGLNKPAE 722
            HVKDFVVGR+GYGSIKF G+TDVR LDL SL+  NNREV+VY D SK P +G+GLNKPAE
Sbjct: 870  HVKDFVVGRHGYGSIKFSGETDVRRLDLESLVQFNNREVIVYMDDSKKPPVGQGLNKPAE 929

Query: 723  VTLLNIMCFDKKTGQQYTEGPXXXXXXXXXXXXTQEHGAEFISYEPSNGEWKFRVNHFFG 902
            VTLLNI CFDKKTG+Q+TEGP             ++ GAEF+SY+P  GEWKF+VNHF  
Sbjct: 930  VTLLNIKCFDKKTGRQFTEGPKIEKYKEMLKRKAEDQGAEFVSYDPVKGEWKFKVNHFSK 989

Query: 903  HDQLSNGKVDLDKQVS 950
            +  L   + D D Q +
Sbjct: 990  Y-MLEEEEEDRDAQAT 1004



 Score = 68.6 bits (166), Expect = 3e-09
 Identities = 37/77 (48%), Positives = 44/77 (57%)
 Frame = +3

Query: 84  TATLGTRGVWPSSFGNQGRGGRVAGYSSTDDIDDGNGIQPGMLKSVSAMPIYKDKTHEEL 263
           T+  G  G   S FG Q  G R + Y+ T + +   G Q G L S+SAM  YKDK+HEEL
Sbjct: 330 TSPFGNNGFAQSGFGAQRPGSRASPYAETAEAE--GGAQAGKLLSISAMTAYKDKSHEEL 387

Query: 264 RWEDSQLGAKEGAAENG 314
           RWED QLG K G    G
Sbjct: 388 RWEDYQLGDKGGPLPAG 404


>ref|XP_004148101.1| PREDICTED: nucleoporin nup189-like [Cucumis sativus]
          Length = 994

 Score =  245 bits (625), Expect = 2e-62
 Identities = 122/239 (51%), Positives = 158/239 (66%), Gaps = 8/239 (3%)
 Frame = +3

Query: 240  KDKTHEELRWEDSQLGAKEGAAENGSDREQTNVARTDQRLNVHYGSAIAP--------IF 395
            K    + L  +D+ +       ENG+ +E  ++ + +Q+ N  +    AP          
Sbjct: 753  KGNLDKSLPSKDTSVRENGNVVENGTSKENIHLNKVNQKPNGVHEDHSAPKEDLYRTFAG 812

Query: 396  GKAGEAVLTYDHGAHIDVLMPKLKLTDYYSEPNIQELAAKEKAKPGFCGHVKDFVVGRYG 575
             +AGEA + Y+HGA I+ LMPKL  +DYY+EP IQELAAKE+A+PGFC HVKDFVVGR+G
Sbjct: 813  HRAGEAAIVYEHGADIEALMPKLLHSDYYTEPKIQELAAKERAEPGFCRHVKDFVVGRHG 872

Query: 576  YGSIKFIGDTDVRGLDLGSLIHLNNREVVVYTDKSKMPSIGEGLNKPAEVTLLNIMCFDK 755
            YGSIKF G+TDVR LDL S++  NNREV+VY D+SK P  G+GLNKPAEVT+LNI C DK
Sbjct: 873  YGSIKFFGETDVRRLDLESIVQFNNREVIVYLDESKKPPCGQGLNKPAEVTILNIKCVDK 932

Query: 756  KTGQQYTEGPXXXXXXXXXXXXTQEHGAEFISYEPSNGEWKFRVNHFFGHDQLSNGKVD 932
            +TG QYTEGP            T+  GAEF+SY+P  GEWKFRV HF  ++   N +V+
Sbjct: 933  QTGHQYTEGPKVEKYKELLRKKTEAQGAEFVSYDPVKGEWKFRVEHFSKYNMEDNEEVE 991



 Score = 78.2 bits (191), Expect = 4e-12
 Identities = 40/79 (50%), Positives = 50/79 (63%), Gaps = 2/79 (2%)
 Frame = +3

Query: 84  TATLGTRGVWPSSFGNQGRGGRVAGYSSTDDIDDGNGIQP--GMLKSVSAMPIYKDKTHE 257
           T++ GT G   + FG Q  G RV  Y+ T + D G+G     G L+S+SAMP+YKDK+HE
Sbjct: 309 TSSFGTSGFGQAGFGGQRGGSRVTPYAPTPEPDPGSGSTQAAGKLESISAMPVYKDKSHE 368

Query: 258 ELRWEDSQLGAKEGAAENG 314
           ELRWED QLG K G    G
Sbjct: 369 ELRWEDYQLGDKGGPLPAG 387