BLASTX nr result

ID: Coptis24_contig00025132 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00025132
         (714 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275031.1| PREDICTED: uncharacterized protein LOC100262...    67   4e-09
ref|XP_002278261.2| PREDICTED: uncharacterized protein LOC100247...    64   4e-08
ref|XP_002278324.2| PREDICTED: uncharacterized protein LOC100259...    62   1e-07
ref|XP_002310508.1| predicted protein [Populus trichocarpa] gi|2...    62   1e-07
emb|CAN62653.1| hypothetical protein VITISV_033269 [Vitis vinifera]    62   1e-07

>ref|XP_002275031.1| PREDICTED: uncharacterized protein LOC100262544 [Vitis vinifera]
           gi|147805256|emb|CAN71192.1| hypothetical protein
           VITISV_019120 [Vitis vinifera]
          Length = 300

 Score = 67.0 bits (162), Expect = 4e-09
 Identities = 33/80 (41%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
 Frame = -3

Query: 394 VDEHLKVQEAVVPGQHGTRAVALTAEEDIDFQEESKKNEMAREGTHAKPA-DIEEGLQAK 218
           +DEHLKV EA++PG HG + + L+ E+D+  QEE KKNE   +G+H +   D  + L   
Sbjct: 220 IDEHLKVHEAIIPGPHGPQVMILSIEDDVHIQEEIKKNEKEIQGSHVRSTQDFPQAL--- 276

Query: 217 GKDTEASSTGAGHHLTEHKH 158
             D EAS++ +  H   H H
Sbjct: 277 --DMEASTSESSQHHIMHNH 294


>ref|XP_002278261.2| PREDICTED: uncharacterized protein LOC100247264 [Vitis vinifera]
          Length = 329

 Score = 63.5 bits (153), Expect = 4e-08
 Identities = 33/72 (45%), Positives = 41/72 (56%)
 Frame = -3

Query: 394 VDEHLKVQEAVVPGQHGTRAVALTAEEDIDFQEESKKNEMAREGTHAKPADIEEGLQAKG 215
           VDEH KV+E V+ G HG + V LT E+D+  QEE +KNE   EG H K A    G   KG
Sbjct: 256 VDEHSKVKEGVIAGPHGEQVVLLTEEDDVHIQEEIRKNEKIGEGLHGKSAQGITGAIEKG 315

Query: 214 KDTEASSTGAGH 179
             +  S+   GH
Sbjct: 316 GYSSISNHRLGH 327



 Score = 59.7 bits (143), Expect = 6e-07
 Identities = 31/61 (50%), Positives = 38/61 (62%)
 Frame = -3

Query: 394 VDEHLKVQEAVVPGQHGTRAVALTAEEDIDFQEESKKNEMAREGTHAKPADIEEGLQAKG 215
           VDEHLKV+EA++ G HG +A+AL  E+D    EE +KNE   EG H K A    G   KG
Sbjct: 185 VDEHLKVKEAMLAGPHGAQALALCMEDDKHIHEEIQKNEKLGEGLHGKAAKGITGAIGKG 244

Query: 214 K 212
           K
Sbjct: 245 K 245


>ref|XP_002278324.2| PREDICTED: uncharacterized protein LOC100259240 [Vitis vinifera]
          Length = 518

 Score = 62.0 bits (149), Expect = 1e-07
 Identities = 32/72 (44%), Positives = 40/72 (55%)
 Frame = -3

Query: 394 VDEHLKVQEAVVPGQHGTRAVALTAEEDIDFQEESKKNEMAREGTHAKPADIEEGLQAKG 215
           VDEH K +E V+ G HG + V LT E+D+  QEE +KNE   EG H K A    G   KG
Sbjct: 445 VDEHSKAKEGVIAGPHGEQVVLLTEEDDVHIQEEIRKNEKIGEGLHGKSAQGITGAIEKG 504

Query: 214 KDTEASSTGAGH 179
             +  S+   GH
Sbjct: 505 GYSSISNHRLGH 516



 Score = 61.2 bits (147), Expect = 2e-07
 Identities = 32/61 (52%), Positives = 38/61 (62%)
 Frame = -3

Query: 394 VDEHLKVQEAVVPGQHGTRAVALTAEEDIDFQEESKKNEMAREGTHAKPADIEEGLQAKG 215
           VDEHLKV+EA++ G HG +A+AL  E+D    EE KKNE   EG H K A    G   KG
Sbjct: 234 VDEHLKVKEAMLAGPHGAQALALCMEDDKHIHEEIKKNEKLGEGLHGKAAKGITGAIGKG 293

Query: 214 K 212
           K
Sbjct: 294 K 294


>ref|XP_002310508.1| predicted protein [Populus trichocarpa] gi|222853411|gb|EEE90958.1|
           predicted protein [Populus trichocarpa]
          Length = 218

 Score = 62.0 bits (149), Expect = 1e-07
 Identities = 35/77 (45%), Positives = 42/77 (54%)
 Frame = -3

Query: 391 DEHLKVQEAVVPGQHGTRAVALTAEEDIDFQEESKKNEMAREGTHAKPADIEEGLQAKGK 212
           DEH KVQEA+VPG HG +   L  EED+   EE KKNE   EG+H K A  +  L +   
Sbjct: 145 DEHTKVQEAIVPGPHGEKITVLNIEEDVHLVEEIKKNEKLTEGSHIKSAH-DRPLYS--- 200

Query: 211 DTEASSTGAGHHLTEHK 161
           D    S+    H  EHK
Sbjct: 201 DIATPSSQYNQHHLEHK 217


>emb|CAN62653.1| hypothetical protein VITISV_033269 [Vitis vinifera]
          Length = 296

 Score = 62.0 bits (149), Expect = 1e-07
 Identities = 32/72 (44%), Positives = 40/72 (55%)
 Frame = -3

Query: 394 VDEHLKVQEAVVPGQHGTRAVALTAEEDIDFQEESKKNEMAREGTHAKPADIEEGLQAKG 215
           VDEH K +E V+ G HG + V LT E+D+  QEE +KNE   EG H K A    G   KG
Sbjct: 223 VDEHSKAKEGVIAGPHGEQVVLLTEEDDVHIQEEIRKNEKIGEGLHGKSAQGITGAIEKG 282

Query: 214 KDTEASSTGAGH 179
             +  S+   GH
Sbjct: 283 GYSSISNHRLGH 294



 Score = 59.7 bits (143), Expect = 6e-07
 Identities = 31/61 (50%), Positives = 38/61 (62%)
 Frame = -3

Query: 394 VDEHLKVQEAVVPGQHGTRAVALTAEEDIDFQEESKKNEMAREGTHAKPADIEEGLQAKG 215
           VDEHLKV+EA++ G HG +A+AL  E+D    EE +KNE   EG H K A    G   KG
Sbjct: 82  VDEHLKVKEAMLAGPHGAQALALCMEDDKHIHEEIQKNEKLGEGLHGKAAKGITGAIGKG 141

Query: 214 K 212
           K
Sbjct: 142 K 142


Top