BLASTX nr result

ID: Coptis24_contig00025060 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00025060
         (273 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263664.1| PREDICTED: ankyrin-1 [Vitis vinifera] gi|296...    65   4e-11
emb|CAN69337.1| hypothetical protein VITISV_032631 [Vitis vinifera]    65   4e-11
dbj|BAJ85351.1| predicted protein [Hordeum vulgare subsp. vulgare]     65   7e-11
ref|XP_003569143.1| PREDICTED: ankyrin-1-like [Brachypodium dist...    61   1e-09
ref|XP_002319644.1| predicted protein [Populus trichocarpa] gi|2...    66   3e-09

>ref|XP_002263664.1| PREDICTED: ankyrin-1 [Vitis vinifera] gi|296087918|emb|CBI35201.3|
           unnamed protein product [Vitis vinifera]
          Length = 458

 Score = 65.5 bits (158), Expect(2) = 4e-11
 Identities = 35/71 (49%), Positives = 47/71 (66%)
 Frame = -3

Query: 268 KILLQGGVNPNEISCGTTPLTAATKIGEIKMIECLLEAGADPDITDNIGEKAIEVAASNP 89
           ++L+Q G   N I+ G TPL  A  IG  ++I CLL+AGADP++TD  G+KAI+VAA+  
Sbjct: 204 ELLIQAGARVNIIAGGATPLHIAADIGSPEIINCLLKAGADPNVTDEDGQKAIQVAAA-- 261

Query: 88  NGNCQAVSTLF 56
            GN   V  LF
Sbjct: 262 RGNRGVVEILF 272



 Score = 26.9 bits (58), Expect(2) = 4e-11
 Identities = 10/24 (41%), Positives = 17/24 (70%)
 Frame = -1

Query: 72  LLALFFFVTSPIPGYPDWSIAGIM 1
           ++ + F +TSPI   P+W+I GI+
Sbjct: 267 VVEILFPLTSPIQSVPEWTIDGII 290


>emb|CAN69337.1| hypothetical protein VITISV_032631 [Vitis vinifera]
          Length = 433

 Score = 65.5 bits (158), Expect(2) = 4e-11
 Identities = 35/71 (49%), Positives = 47/71 (66%)
 Frame = -3

Query: 268 KILLQGGVNPNEISCGTTPLTAATKIGEIKMIECLLEAGADPDITDNIGEKAIEVAASNP 89
           ++L+Q G   N I+ G TPL  A  IG  ++I CLL+AGADP++TD  G+KAI+VAA+  
Sbjct: 204 ELLIQAGARVNIIAGGATPLHIAADIGSPEIINCLLKAGADPNVTDEDGQKAIQVAAA-- 261

Query: 88  NGNCQAVSTLF 56
            GN   V  LF
Sbjct: 262 RGNRGVVEILF 272



 Score = 26.9 bits (58), Expect(2) = 4e-11
 Identities = 10/24 (41%), Positives = 17/24 (70%)
 Frame = -1

Query: 72  LLALFFFVTSPIPGYPDWSIAGIM 1
           ++ + F +TSPI   P+W+I GI+
Sbjct: 267 VVEILFPLTSPIQSVPEWTIDGII 290


>dbj|BAJ85351.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 458

 Score = 65.1 bits (157), Expect(2) = 7e-11
 Identities = 30/61 (49%), Positives = 42/61 (68%)
 Frame = -3

Query: 268 KILLQGGVNPNEISCGTTPLTAATKIGEIKMIECLLEAGADPDITDNIGEKAIEVAASNP 89
           ++L+Q G NPN  + G TPL  A  IG ++MI+CLL+AG DP+ +D+ G K I+VAA   
Sbjct: 204 EVLIQAGANPNLTAAGATPLHIAADIGNLEMIKCLLQAGGDPNTSDDDGFKPIQVAALRD 263

Query: 88  N 86
           N
Sbjct: 264 N 264



 Score = 26.6 bits (57), Expect(2) = 7e-11
 Identities = 9/17 (52%), Positives = 14/17 (82%)
 Frame = -1

Query: 51  VTSPIPGYPDWSIAGIM 1
           +TSPIPG  +W++ GI+
Sbjct: 274 LTSPIPGVSNWTVDGIV 290


>ref|XP_003569143.1| PREDICTED: ankyrin-1-like [Brachypodium distachyon]
          Length = 463

 Score = 60.8 bits (146), Expect(2) = 1e-09
 Identities = 29/61 (47%), Positives = 41/61 (67%)
 Frame = -3

Query: 268 KILLQGGVNPNEISCGTTPLTAATKIGEIKMIECLLEAGADPDITDNIGEKAIEVAASNP 89
           ++L+Q G NPN I+ G TPL  A   G + +I+CLL+AG DP+ +D+ G K I+VAA   
Sbjct: 205 EVLIQAGANPNVIAGGATPLHIAADSGNMDIIKCLLQAGGDPNTSDDDGLKPIQVAALRN 264

Query: 88  N 86
           N
Sbjct: 265 N 265



 Score = 26.6 bits (57), Expect(2) = 1e-09
 Identities = 9/17 (52%), Positives = 14/17 (82%)
 Frame = -1

Query: 51  VTSPIPGYPDWSIAGIM 1
           +TSPIPG  +W++ GI+
Sbjct: 275 LTSPIPGVSNWTVDGIV 291


>ref|XP_002319644.1| predicted protein [Populus trichocarpa] gi|222858020|gb|EEE95567.1|
           predicted protein [Populus trichocarpa]
          Length = 451

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 37/82 (45%), Positives = 50/82 (60%)
 Frame = -3

Query: 268 KILLQGGVNPNEISCGTTPLTAATKIGEIKMIECLLEAGADPDITDNIGEKAIEVAASNP 89
           ++L+Q G + N  S G TPL  A  IG  +++ CLLEAGADP++TD  G+K I+VAA+  
Sbjct: 196 ELLVQAGADVNVASGGATPLHIAADIGSPEILNCLLEAGADPNVTDEDGQKPIQVAAA-- 253

Query: 88  NGNCQAVSTLFFCDLSYSRISR 23
            GN  AV  LF        IS+
Sbjct: 254 RGNRAAVEILFPLTTKVQSISK 275


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