BLASTX nr result

ID: Coptis24_contig00024958 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00024958
         (521 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002302266.1| predicted protein [Populus trichocarpa] gi|2...   262   2e-68
ref|XP_002306599.1| predicted protein [Populus trichocarpa] gi|2...   259   1e-67
ref|XP_004169470.1| PREDICTED: uncharacterized LOC101222277 [Cuc...   252   2e-65
ref|XP_004151123.1| PREDICTED: uncharacterized protein LOC101222...   252   2e-65
ref|XP_002513847.1| conserved hypothetical protein [Ricinus comm...   249   1e-64

>ref|XP_002302266.1| predicted protein [Populus trichocarpa] gi|222843992|gb|EEE81539.1|
           predicted protein [Populus trichocarpa]
          Length = 322

 Score =  262 bits (669), Expect = 2e-68
 Identities = 130/174 (74%), Positives = 150/174 (86%), Gaps = 1/174 (0%)
 Frame = -3

Query: 519 SLDGHRNPNPHQYRQMIRAISGCRRHSMGLEEENKALMENRVQLLSLRFDEKVSLESKLN 340
           SLD HR+ +P   RQ+IRAISGCRR ++GLEE+N+ALME R+Q LSLRFDEK+S+ESKLN
Sbjct: 105 SLDNHRHLSPQLSRQVIRAISGCRREAVGLEEDNRALMETRIQPLSLRFDEKISIESKLN 164

Query: 339 GFNGFRGVLYAMRNVSSFLLMILLYGLVYYWPDSSFRRGGYDGCLLFGSSFMVSTSRLQQ 160
           GFNGFRGVLYAMRNVSS LLMILLYGLVY WP+SSF RGGY+GCL FGS+FM+ST RLQQ
Sbjct: 165 GFNGFRGVLYAMRNVSSLLLMILLYGLVYCWPESSFLRGGYEGCLFFGSAFMISTGRLQQ 224

Query: 159 RVAAEINRIDGRPGTLLYEFKRVKSAMEELRAELERTCSSQGSAEFEDE-GIRE 1
           RVAAEIN+I+GRPG LLYEF+R K AMEELR ELER C   G+ E+E E G+RE
Sbjct: 225 RVAAEINQINGRPGILLYEFRRSKMAMEELRGELERKCGQGGAVEWETEVGMRE 278


>ref|XP_002306599.1| predicted protein [Populus trichocarpa] gi|222856048|gb|EEE93595.1|
           predicted protein [Populus trichocarpa]
          Length = 322

 Score =  259 bits (663), Expect = 1e-67
 Identities = 129/174 (74%), Positives = 149/174 (85%), Gaps = 1/174 (0%)
 Frame = -3

Query: 519 SLDGHRNPNPHQYRQMIRAISGCRRHSMGLEEENKALMENRVQLLSLRFDEKVSLESKLN 340
           SL+ HR+ +P   RQ+ RAISGCRR ++GLEEEN+ALME R+Q LSLRFDEK+S+ESKLN
Sbjct: 105 SLENHRHLSPQLSRQVTRAISGCRREAVGLEEENRALMETRIQPLSLRFDEKISIESKLN 164

Query: 339 GFNGFRGVLYAMRNVSSFLLMILLYGLVYYWPDSSFRRGGYDGCLLFGSSFMVSTSRLQQ 160
           GFNGFRGVLYAMRNVSS LLMILLYGLVY WP+SSF RGGY+GCL FGS+F++ST RLQQ
Sbjct: 165 GFNGFRGVLYAMRNVSSLLLMILLYGLVYCWPESSFLRGGYEGCLFFGSAFLISTGRLQQ 224

Query: 159 RVAAEINRIDGRPGTLLYEFKRVKSAMEELRAELERTCSSQGSAEFEDE-GIRE 1
           RVAAEIN+I+GRPG LLYEF+R K AMEELR ELER C   G+ E+E E GIRE
Sbjct: 225 RVAAEINQINGRPGILLYEFRRSKMAMEELRGELERKCGQGGAVEWETEVGIRE 278


>ref|XP_004169470.1| PREDICTED: uncharacterized LOC101222277 [Cucumis sativus]
          Length = 324

 Score =  252 bits (644), Expect = 2e-65
 Identities = 130/176 (73%), Positives = 151/176 (85%), Gaps = 3/176 (1%)
 Frame = -3

Query: 519 SLDGHRNPNPHQYRQMIRAISGCRRHSMGLEEENKALMENRVQLLSLRFDEKVSLESKLN 340
           SL+ HR+ +P   RQ+IRAISGCRR ++GLEEEN+ALME R+Q LSLRFDEKVS+ESKLN
Sbjct: 105 SLETHRHLSPQLSRQVIRAISGCRREAVGLEEENRALMEARIQPLSLRFDEKVSIESKLN 164

Query: 339 GFNGFRGVLYAMRNVSSFLLMILLYGLVYYWPDSSFRRGGYDGCLLFGSSFMVSTSRLQQ 160
           GFNGFRGVLYAMRNVSS LLMILLYGLVY WP+S+F RGGY+GCL FGS+FM+ST+RLQ+
Sbjct: 165 GFNGFRGVLYAMRNVSSLLLMILLYGLVYCWPESNFVRGGYEGCLFFGSAFMISTARLQE 224

Query: 159 RVAAEINRIDGRPGTLLYEFKRVKSAMEELRAELERT--CSSQGSAEFEDE-GIRE 1
           RVA EIN+++GRPG LLYEF+R K AMEELRAELER     SQG  E+E E GIRE
Sbjct: 225 RVAGEINQMNGRPGILLYEFRRSKMAMEELRAELERRVGMGSQGLVEWETEIGIRE 280


>ref|XP_004151123.1| PREDICTED: uncharacterized protein LOC101222277 [Cucumis sativus]
          Length = 267

 Score =  252 bits (644), Expect = 2e-65
 Identities = 130/176 (73%), Positives = 151/176 (85%), Gaps = 3/176 (1%)
 Frame = -3

Query: 519 SLDGHRNPNPHQYRQMIRAISGCRRHSMGLEEENKALMENRVQLLSLRFDEKVSLESKLN 340
           SL+ HR+ +P   RQ+IRAISGCRR ++GLEEEN+ALME R+Q LSLRFDEKVS+ESKLN
Sbjct: 48  SLETHRHLSPQLSRQVIRAISGCRREAVGLEEENRALMEARIQPLSLRFDEKVSIESKLN 107

Query: 339 GFNGFRGVLYAMRNVSSFLLMILLYGLVYYWPDSSFRRGGYDGCLLFGSSFMVSTSRLQQ 160
           GFNGFRGVLYAMRNVSS LLMILLYGLVY WP+S+F RGGY+GCL FGS+FM+ST+RLQ+
Sbjct: 108 GFNGFRGVLYAMRNVSSLLLMILLYGLVYCWPESNFVRGGYEGCLFFGSAFMISTARLQE 167

Query: 159 RVAAEINRIDGRPGTLLYEFKRVKSAMEELRAELERT--CSSQGSAEFEDE-GIRE 1
           RVA EIN+++GRPG LLYEF+R K AMEELRAELER     SQG  E+E E GIRE
Sbjct: 168 RVAGEINQMNGRPGILLYEFRRSKMAMEELRAELERRVGMGSQGLVEWETEIGIRE 223


>ref|XP_002513847.1| conserved hypothetical protein [Ricinus communis]
           gi|223546933|gb|EEF48430.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 320

 Score =  249 bits (637), Expect = 1e-64
 Identities = 128/173 (73%), Positives = 144/173 (83%)
 Frame = -3

Query: 519 SLDGHRNPNPHQYRQMIRAISGCRRHSMGLEEENKALMENRVQLLSLRFDEKVSLESKLN 340
           SLD HR  +    RQ+IRAISGCRR ++GLEEEN+ALME R+Q LSLRFDEKVS+ESKLN
Sbjct: 105 SLDNHRRLSSQLSRQVIRAISGCRREALGLEEENRALMETRIQPLSLRFDEKVSIESKLN 164

Query: 339 GFNGFRGVLYAMRNVSSFLLMILLYGLVYYWPDSSFRRGGYDGCLLFGSSFMVSTSRLQQ 160
           GFNGFRGVLYAMRNVSS LLMILLYGLVY WP+SSF +GGY+GCL FGS+FM+ST+RLQQ
Sbjct: 165 GFNGFRGVLYAMRNVSSLLLMILLYGLVYCWPESSFLKGGYEGCLFFGSAFMISTARLQQ 224

Query: 159 RVAAEINRIDGRPGTLLYEFKRVKSAMEELRAELERTCSSQGSAEFEDEGIRE 1
           RVA EIN+I+GRPG LLYEF+R K AMEELR ELER C      E E E IRE
Sbjct: 225 RVAEEINQINGRPGILLYEFRRSKMAMEELRGELERRCGQVVDWETEVE-IRE 276


Top