BLASTX nr result

ID: Coptis24_contig00024920 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00024920
         (947 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269610.2| PREDICTED: cellulose synthase A catalytic su...   465   e-129
emb|CBI30713.3| unnamed protein product [Vitis vinifera]              445   e-123
ref|XP_002522238.1| wd40 protein, putative [Ricinus communis] gi...   416   e-114
ref|XP_004161207.1| PREDICTED: LOW QUALITY PROTEIN: cellulose sy...   407   e-111
ref|XP_004150226.1| PREDICTED: LOW QUALITY PROTEIN: cellulose sy...   407   e-111

>ref|XP_002269610.2| PREDICTED: cellulose synthase A catalytic subunit 8 [UDP-forming]
           [Vitis vinifera]
          Length = 1360

 Score =  465 bits (1196), Expect = e-129
 Identities = 218/303 (71%), Positives = 258/303 (85%), Gaps = 1/303 (0%)
 Frame = +1

Query: 40  MMKPRRLKGHKKTVTCCIASRTRPGLIATSSEDGCICWFDMRCKDVVFTMDLDKKPISSI 219
           M + RRL+GHK T TCCIASR RPGL+ATS EDGCICWFDMRCKDVV TMDL   PISS+
Sbjct: 1   MAEARRLRGHKATATCCIASRDRPGLVATSGEDGCICWFDMRCKDVVLTMDLGVNPISSL 60

Query: 220 CFNQGNEDILYACSGTEVISFDVNMASSWKPLETYNHNKEEINQISCNSKSSFLAAADDS 399
           CF  GNEDI+Y  SG+EV  FDV++A +WKPLE+YN+NKEEINQI+CNSKSSFLA+ADD 
Sbjct: 61  CFKPGNEDIIYVSSGSEVKCFDVHLADAWKPLESYNYNKEEINQIACNSKSSFLASADDD 120

Query: 400 GGIKIIDIRQHCLYKTLRSGHTSICSSVQFLPWRPWEVITGGLDAKLVMWDFSKGRPCKI 579
           G +KIIDIRQ CL+KTLRSGHTSICSSV+FLPWRPWEVITGGLD+KLVMWDFSKGRP KI
Sbjct: 121 GDVKIIDIRQKCLFKTLRSGHTSICSSVKFLPWRPWEVITGGLDSKLVMWDFSKGRPYKI 180

Query: 580 MDFGLPDMESHGSGGQCFNPAFIHAVAIPEVDMLDKSGKVCAVARGDGVVDVIDIESEIA 759
           +DFG+PDME+  S GQC NPAF+HA+A+PEVDML+KSGK+C VARGDGVVDVI+IESE+A
Sbjct: 181 VDFGMPDMENSSSAGQCLNPAFVHAIAVPEVDMLEKSGKICVVARGDGVVDVINIESELA 240

Query: 760 SSKLKSSIRPRTGSQSSSGNVKPAATTT-TLIQESGKRLHLDNSLGGHTVAVSCVSFSLF 936
           +++ K+S +P+ GS+S S +    +T   TL Q   +RLHLD SLGGHT +VSCV+F+LF
Sbjct: 241 AAQSKTSSKPQRGSKSRSKSKGSVSTVAETLNQNGRRRLHLDYSLGGHTASVSCVAFALF 300

Query: 937 AER 945
            ER
Sbjct: 301 GER 303


>emb|CBI30713.3| unnamed protein product [Vitis vinifera]
          Length = 355

 Score =  445 bits (1144), Expect = e-123
 Identities = 210/302 (69%), Positives = 245/302 (81%)
 Frame = +1

Query: 40  MMKPRRLKGHKKTVTCCIASRTRPGLIATSSEDGCICWFDMRCKDVVFTMDLDKKPISSI 219
           M + RRL+GHK T TCCIASR RPGL+ATS EDGCICWFDMRCKDVV TMDL   PISS+
Sbjct: 1   MAEARRLRGHKATATCCIASRDRPGLVATSGEDGCICWFDMRCKDVVLTMDLGVNPISSL 60

Query: 220 CFNQGNEDILYACSGTEVISFDVNMASSWKPLETYNHNKEEINQISCNSKSSFLAAADDS 399
           CF  GNEDI+Y  SG+EV  FDV++A +WKPLE+YN+NKEEINQI+CNSKSSFLA+ADD 
Sbjct: 61  CFKPGNEDIIYVSSGSEVKCFDVHLADAWKPLESYNYNKEEINQIACNSKSSFLASADDD 120

Query: 400 GGIKIIDIRQHCLYKTLRSGHTSICSSVQFLPWRPWEVITGGLDAKLVMWDFSKGRPCKI 579
           G +KIIDIRQ CL+KTLRSGHTSICSSV+FLPWRPWEVITGGLD+KLVMWDFSKGRP KI
Sbjct: 121 GDVKIIDIRQKCLFKTLRSGHTSICSSVKFLPWRPWEVITGGLDSKLVMWDFSKGRPYKI 180

Query: 580 MDFGLPDMESHGSGGQCFNPAFIHAVAIPEVDMLDKSGKVCAVARGDGVVDVIDIESEIA 759
           +DFG+PDME+  S GQC NPAF+HA+A+PEVDML+KSGK+C VARGDGVVDVI+IESE+A
Sbjct: 181 VDFGMPDMENSSSAGQCLNPAFVHAIAVPEVDMLEKSGKICVVARGDGVVDVINIESELA 240

Query: 760 SSKLKSSIRPRTGSQSSSGNVKPAATTTTLIQESGKRLHLDNSLGGHTVAVSCVSFSLFA 939
           ++ +                   +    TL Q   +RLHLD SLGGHT +VSCV+F+LF 
Sbjct: 241 AAHV-------------------STVAETLNQNGRRRLHLDYSLGGHTASVSCVAFALFG 281

Query: 940 ER 945
           ER
Sbjct: 282 ER 283


>ref|XP_002522238.1| wd40 protein, putative [Ricinus communis]
           gi|223538491|gb|EEF40096.1| wd40 protein, putative
           [Ricinus communis]
          Length = 1458

 Score =  416 bits (1069), Expect = e-114
 Identities = 195/302 (64%), Positives = 240/302 (79%)
 Frame = +1

Query: 40  MMKPRRLKGHKKTVTCCIASRTRPGLIATSSEDGCICWFDMRCKDVVFTMDLDKKPISSI 219
           M +PRRL+GHK T TCCIASR RPG++AT+ EDG +CWFDMRCKD    M++  +PISS+
Sbjct: 1   MSEPRRLRGHKATATCCIASRDRPGVVATAGEDGRVCWFDMRCKDAQLMMEVGDQPISSL 60

Query: 220 CFNQGNEDILYACSGTEVISFDVNMASSWKPLETYNHNKEEINQISCNSKSSFLAAADDS 399
           CF  GNE+I Y  SG+EV  FD++MA+S K L++YNHNKEEINQI+CNSK++FLA+ DD 
Sbjct: 61  CFKPGNENIFYVSSGSEVKCFDMHMATSGKLLQSYNHNKEEINQIACNSKAAFLASTDDG 120

Query: 400 GGIKIIDIRQHCLYKTLRSGHTSICSSVQFLPWRPWEVITGGLDAKLVMWDFSKGRPCKI 579
           G +KIIDIRQHCL+KTLR+GHTSICSSVQF+PWRPW VITGGLD+KLVMWDFSKGRP KI
Sbjct: 121 GNVKIIDIRQHCLFKTLRAGHTSICSSVQFIPWRPWGVITGGLDSKLVMWDFSKGRPTKI 180

Query: 580 MDFGLPDMESHGSGGQCFNPAFIHAVAIPEVDMLDKSGKVCAVARGDGVVDVIDIESEIA 759
           +DFGLP+M+   +  QC NPAF+HA+A+P+ DMLDKSGK+C VARGDG+VDVI+IESE+A
Sbjct: 181 VDFGLPEMKDSNT-TQCVNPAFVHAIAVPDADMLDKSGKICVVARGDGIVDVINIESELA 239

Query: 760 SSKLKSSIRPRTGSQSSSGNVKPAATTTTLIQESGKRLHLDNSLGGHTVAVSCVSFSLFA 939
           + + K + + R GSQS+S +    A T          LH D SLGGH  A SCV+FSLF 
Sbjct: 240 AVRTKITTKARKGSQSTSKDSNTTAGT------QSSMLHFDYSLGGHVAAASCVAFSLFG 293

Query: 940 ER 945
           ER
Sbjct: 294 ER 295


>ref|XP_004161207.1| PREDICTED: LOW QUALITY PROTEIN: cellulose synthase A catalytic
           subunit 8 [UDP-forming]-like [Cucumis sativus]
          Length = 1390

 Score =  407 bits (1046), Expect = e-111
 Identities = 190/299 (63%), Positives = 235/299 (78%)
 Frame = +1

Query: 49  PRRLKGHKKTVTCCIASRTRPGLIATSSEDGCICWFDMRCKDVVFTMDLDKKPISSICFN 228
           PRRL+GHK T TCC+AS  RPGL+ATS EDGC+CWFDMRCKDVV  M++ K+PISSICF 
Sbjct: 6   PRRLRGHKGTATCCVASNDRPGLVATSGEDGCVCWFDMRCKDVVSIMEVGKEPISSICFK 65

Query: 229 QGNEDILYACSGTEVISFDVNMASSWKPLETYNHNKEEINQISCNSKSSFLAAADDSGGI 408
            GNED++Y  SG E+ SFDV+ A++ KPL +Y++NKEEINQ+SC+ K+SFLAAADD G +
Sbjct: 66  PGNEDVIYISSGKEIKSFDVHQAAASKPLGSYSYNKEEINQVSCSPKASFLAAADDGGDV 125

Query: 409 KIIDIRQHCLYKTLRSGHTSICSSVQFLPWRPWEVITGGLDAKLVMWDFSKGRPCKIMDF 588
           KIID+  +CLYKTLRSGHTSICSSVQFLPWRPWEVITGGLD+KL+MWDFS+GRP + +DF
Sbjct: 126 KIIDVHNNCLYKTLRSGHTSICSSVQFLPWRPWEVITGGLDSKLIMWDFSRGRPIQALDF 185

Query: 589 GLPDMESHGSGGQCFNPAFIHAVAIPEVDMLDKSGKVCAVARGDGVVDVIDIESEIASSK 768
            +PD     S GQCFNPAFIHA+A+PEV+MLD+ G++C VARGDG+V VIDIESE    K
Sbjct: 186 DIPDNHPSSSTGQCFNPAFIHAIAVPEVNMLDRLGQICVVARGDGIVHVIDIESE----K 241

Query: 769 LKSSIRPRTGSQSSSGNVKPAATTTTLIQESGKRLHLDNSLGGHTVAVSCVSFSLFAER 945
            K+S +     Q+ S  V  A       Q   K+L+LD ++GGH+ AVSCV+FS F E+
Sbjct: 242 SKTSSKTGKKVQTRSKGVTAACDMNNQEQTGRKKLYLDYTVGGHSAAVSCVAFSQFGEK 300


>ref|XP_004150226.1| PREDICTED: LOW QUALITY PROTEIN: cellulose synthase A catalytic
           subunit 8 [UDP-forming]-like [Cucumis sativus]
          Length = 1362

 Score =  407 bits (1045), Expect = e-111
 Identities = 190/299 (63%), Positives = 235/299 (78%)
 Frame = +1

Query: 49  PRRLKGHKKTVTCCIASRTRPGLIATSSEDGCICWFDMRCKDVVFTMDLDKKPISSICFN 228
           PRRL+GHK T TCC+AS  RPGL+ATS EDGC+CWFDMRCKDVV  M++ K+PISSICF 
Sbjct: 6   PRRLRGHKGTATCCVASNDRPGLVATSGEDGCVCWFDMRCKDVVSIMEVGKEPISSICFK 65

Query: 229 QGNEDILYACSGTEVISFDVNMASSWKPLETYNHNKEEINQISCNSKSSFLAAADDSGGI 408
            GNED++Y  SG E+ SFDV+ A++ KPL +Y++NKEEINQ+SC+ K+SFLAAADD G +
Sbjct: 66  PGNEDVIYISSGKEIKSFDVHQATASKPLGSYSYNKEEINQVSCSPKASFLAAADDGGDV 125

Query: 409 KIIDIRQHCLYKTLRSGHTSICSSVQFLPWRPWEVITGGLDAKLVMWDFSKGRPCKIMDF 588
           KIID+  +CLYKTLRSGHTSICSSVQFLPWRPWEVITGGLD+KL+MWDFS+GRP +++DF
Sbjct: 126 KIIDVHNNCLYKTLRSGHTSICSSVQFLPWRPWEVITGGLDSKLIMWDFSRGRPIQVLDF 185

Query: 589 GLPDMESHGSGGQCFNPAFIHAVAIPEVDMLDKSGKVCAVARGDGVVDVIDIESEIASSK 768
            +PD     S  QCFNPAFIHA+A+PEV+MLD+ G++C VARGDG+V VIDIESE    K
Sbjct: 186 DIPDNHPSSSTEQCFNPAFIHAIAVPEVNMLDRLGQICVVARGDGIVHVIDIESE----K 241

Query: 769 LKSSIRPRTGSQSSSGNVKPAATTTTLIQESGKRLHLDNSLGGHTVAVSCVSFSLFAER 945
            K+S +     QS S  V  A       Q   K+L+LD ++GGH+ AVSCV+FS F E+
Sbjct: 242 SKTSSKTGKKVQSRSKGVTAACDMNNQEQTGRKKLYLDYTVGGHSAAVSCVAFSQFGEK 300


Top