BLASTX nr result
ID: Coptis24_contig00024842
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00024842 (210 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI36841.3| unnamed protein product [Vitis vinifera] 111 5e-23 ref|XP_002265012.1| PREDICTED: ABC transporter C family member 4... 111 5e-23 ref|XP_003536885.1| PREDICTED: ABC transporter C family member 4... 111 7e-23 ref|XP_002301476.1| multidrug resistance protein ABC transporter... 110 9e-23 ref|XP_004152254.1| PREDICTED: ABC transporter C family member 4... 108 4e-22 >emb|CBI36841.3| unnamed protein product [Vitis vinifera] Length = 1079 Score = 111 bits (278), Expect = 5e-23 Identities = 51/68 (75%), Positives = 58/68 (85%) Frame = -3 Query: 205 QILHSILHAPMPFFDTTPPGRILSRVSNDQTNIDLLLPLFINMTIAMYITVLGIIIVTCQ 26 QILHSILHAPM FFDTTP GRILSR S DQTN+DL +P F+ +T+AMYIT+L III+TCQ Sbjct: 594 QILHSILHAPMSFFDTTPSGRILSRASTDQTNVDLFVPFFMAVTLAMYITLLSIIIITCQ 653 Query: 25 VTWPTIFL 2 WPTIFL Sbjct: 654 YAWPTIFL 661 >ref|XP_002265012.1| PREDICTED: ABC transporter C family member 4-like [Vitis vinifera] Length = 1509 Score = 111 bits (278), Expect = 5e-23 Identities = 51/68 (75%), Positives = 58/68 (85%) Frame = -3 Query: 205 QILHSILHAPMPFFDTTPPGRILSRVSNDQTNIDLLLPLFINMTIAMYITVLGIIIVTCQ 26 QILHSILHAPM FFDTTP GRILSR S DQTN+DL +P F+ +T+AMYIT+L III+TCQ Sbjct: 1024 QILHSILHAPMSFFDTTPSGRILSRASTDQTNVDLFVPFFMAVTLAMYITLLSIIIITCQ 1083 Query: 25 VTWPTIFL 2 WPTIFL Sbjct: 1084 YAWPTIFL 1091 >ref|XP_003536885.1| PREDICTED: ABC transporter C family member 4-like [Glycine max] Length = 1501 Score = 111 bits (277), Expect = 7e-23 Identities = 50/68 (73%), Positives = 57/68 (83%) Frame = -3 Query: 205 QILHSILHAPMPFFDTTPPGRILSRVSNDQTNIDLLLPLFINMTIAMYITVLGIIIVTCQ 26 QILHSILHAPM FFDTTP GRILSR S DQTN+D+ +PLFIN +AMYITV+ I I+TCQ Sbjct: 1016 QILHSILHAPMSFFDTTPSGRILSRASTDQTNVDVFIPLFINFVVAMYITVISIFIITCQ 1075 Query: 25 VTWPTIFL 2 +WPT FL Sbjct: 1076 NSWPTAFL 1083 >ref|XP_002301476.1| multidrug resistance protein ABC transporter family [Populus trichocarpa] gi|222843202|gb|EEE80749.1| multidrug resistance protein ABC transporter family [Populus trichocarpa] Length = 1508 Score = 110 bits (276), Expect = 9e-23 Identities = 50/67 (74%), Positives = 58/67 (86%) Frame = -3 Query: 202 ILHSILHAPMPFFDTTPPGRILSRVSNDQTNIDLLLPLFINMTIAMYITVLGIIIVTCQV 23 ILHSILHAPM FFDTTP GRILSR S+DQTN+D+ LP + +TIAMYI+VLGIII+ CQ Sbjct: 1024 ILHSILHAPMSFFDTTPSGRILSRASSDQTNVDIFLPFMLALTIAMYISVLGIIIIICQY 1083 Query: 22 TWPTIFL 2 TWPT+FL Sbjct: 1084 TWPTVFL 1090 >ref|XP_004152254.1| PREDICTED: ABC transporter C family member 4-like [Cucumis sativus] gi|449484283|ref|XP_004156839.1| PREDICTED: ABC transporter C family member 4-like [Cucumis sativus] Length = 1507 Score = 108 bits (270), Expect = 4e-22 Identities = 51/68 (75%), Positives = 55/68 (80%) Frame = -3 Query: 205 QILHSILHAPMPFFDTTPPGRILSRVSNDQTNIDLLLPLFINMTIAMYITVLGIIIVTCQ 26 QIL SILHAPM FFDTTP GRILSR SNDQTNID+ +P F+ + AMYITVL I IVTCQ Sbjct: 1022 QILSSILHAPMSFFDTTPSGRILSRASNDQTNIDVFIPFFVTIATAMYITVLSIFIVTCQ 1081 Query: 25 VTWPTIFL 2 WPTIFL Sbjct: 1082 YAWPTIFL 1089