BLASTX nr result

ID: Coptis24_contig00024842 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00024842
         (210 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI36841.3| unnamed protein product [Vitis vinifera]              111   5e-23
ref|XP_002265012.1| PREDICTED: ABC transporter C family member 4...   111   5e-23
ref|XP_003536885.1| PREDICTED: ABC transporter C family member 4...   111   7e-23
ref|XP_002301476.1| multidrug resistance protein ABC transporter...   110   9e-23
ref|XP_004152254.1| PREDICTED: ABC transporter C family member 4...   108   4e-22

>emb|CBI36841.3| unnamed protein product [Vitis vinifera]
          Length = 1079

 Score =  111 bits (278), Expect = 5e-23
 Identities = 51/68 (75%), Positives = 58/68 (85%)
 Frame = -3

Query: 205 QILHSILHAPMPFFDTTPPGRILSRVSNDQTNIDLLLPLFINMTIAMYITVLGIIIVTCQ 26
           QILHSILHAPM FFDTTP GRILSR S DQTN+DL +P F+ +T+AMYIT+L III+TCQ
Sbjct: 594 QILHSILHAPMSFFDTTPSGRILSRASTDQTNVDLFVPFFMAVTLAMYITLLSIIIITCQ 653

Query: 25  VTWPTIFL 2
             WPTIFL
Sbjct: 654 YAWPTIFL 661


>ref|XP_002265012.1| PREDICTED: ABC transporter C family member 4-like [Vitis vinifera]
          Length = 1509

 Score =  111 bits (278), Expect = 5e-23
 Identities = 51/68 (75%), Positives = 58/68 (85%)
 Frame = -3

Query: 205  QILHSILHAPMPFFDTTPPGRILSRVSNDQTNIDLLLPLFINMTIAMYITVLGIIIVTCQ 26
            QILHSILHAPM FFDTTP GRILSR S DQTN+DL +P F+ +T+AMYIT+L III+TCQ
Sbjct: 1024 QILHSILHAPMSFFDTTPSGRILSRASTDQTNVDLFVPFFMAVTLAMYITLLSIIIITCQ 1083

Query: 25   VTWPTIFL 2
              WPTIFL
Sbjct: 1084 YAWPTIFL 1091


>ref|XP_003536885.1| PREDICTED: ABC transporter C family member 4-like [Glycine max]
          Length = 1501

 Score =  111 bits (277), Expect = 7e-23
 Identities = 50/68 (73%), Positives = 57/68 (83%)
 Frame = -3

Query: 205  QILHSILHAPMPFFDTTPPGRILSRVSNDQTNIDLLLPLFINMTIAMYITVLGIIIVTCQ 26
            QILHSILHAPM FFDTTP GRILSR S DQTN+D+ +PLFIN  +AMYITV+ I I+TCQ
Sbjct: 1016 QILHSILHAPMSFFDTTPSGRILSRASTDQTNVDVFIPLFINFVVAMYITVISIFIITCQ 1075

Query: 25   VTWPTIFL 2
             +WPT FL
Sbjct: 1076 NSWPTAFL 1083


>ref|XP_002301476.1| multidrug resistance protein ABC transporter family [Populus
            trichocarpa] gi|222843202|gb|EEE80749.1| multidrug
            resistance protein ABC transporter family [Populus
            trichocarpa]
          Length = 1508

 Score =  110 bits (276), Expect = 9e-23
 Identities = 50/67 (74%), Positives = 58/67 (86%)
 Frame = -3

Query: 202  ILHSILHAPMPFFDTTPPGRILSRVSNDQTNIDLLLPLFINMTIAMYITVLGIIIVTCQV 23
            ILHSILHAPM FFDTTP GRILSR S+DQTN+D+ LP  + +TIAMYI+VLGIII+ CQ 
Sbjct: 1024 ILHSILHAPMSFFDTTPSGRILSRASSDQTNVDIFLPFMLALTIAMYISVLGIIIIICQY 1083

Query: 22   TWPTIFL 2
            TWPT+FL
Sbjct: 1084 TWPTVFL 1090


>ref|XP_004152254.1| PREDICTED: ABC transporter C family member 4-like [Cucumis sativus]
            gi|449484283|ref|XP_004156839.1| PREDICTED: ABC
            transporter C family member 4-like [Cucumis sativus]
          Length = 1507

 Score =  108 bits (270), Expect = 4e-22
 Identities = 51/68 (75%), Positives = 55/68 (80%)
 Frame = -3

Query: 205  QILHSILHAPMPFFDTTPPGRILSRVSNDQTNIDLLLPLFINMTIAMYITVLGIIIVTCQ 26
            QIL SILHAPM FFDTTP GRILSR SNDQTNID+ +P F+ +  AMYITVL I IVTCQ
Sbjct: 1022 QILSSILHAPMSFFDTTPSGRILSRASNDQTNIDVFIPFFVTIATAMYITVLSIFIVTCQ 1081

Query: 25   VTWPTIFL 2
              WPTIFL
Sbjct: 1082 YAWPTIFL 1089


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