BLASTX nr result

ID: Coptis24_contig00024819 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00024819
         (441 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308594.1| predicted protein [Populus trichocarpa] gi|2...   166   2e-39
ref|XP_002336388.1| predicted protein [Populus trichocarpa] gi|2...   162   3e-38
ref|XP_002516521.1| hypothetical protein RCOM_0800710 [Ricinus c...   160   1e-37
ref|XP_002308595.1| predicted protein [Populus trichocarpa] gi|2...   160   1e-37
gb|ABK96434.1| unknown [Populus trichocarpa x Populus deltoides]      158   4e-37

>ref|XP_002308594.1| predicted protein [Populus trichocarpa] gi|222854570|gb|EEE92117.1|
           predicted protein [Populus trichocarpa]
          Length = 169

 Score =  166 bits (420), Expect = 2e-39
 Identities = 78/148 (52%), Positives = 103/148 (69%), Gaps = 4/148 (2%)
 Frame = +3

Query: 9   MADDPQQKWQGKVCAKLKGSTADQIWPLFEDYCNIQKWLPIVDSCHHVKGSPDPGQPGCI 188
           M ++ Q KW+GK   +LKG TADQ+WP  ED+CN+QKWLP VD+C+ V+G  + GQPG +
Sbjct: 1   MTEETQGKWEGKATVELKGPTADQVWPFLEDFCNLQKWLPGVDTCYQVEG--ELGQPGLV 58

Query: 189 RYC-AGPATPTNDSSTTTFGWANENLLAIDPMERYLTYEINESNMGFDNYVATIKVLL-- 359
           RYC +G A+           WA E L+ I+P ER L+YEI E+N GF +YVAT+KV    
Sbjct: 59  RYCSSGTASSDGSHEGNKVIWAKEKLIMINPSERCLSYEILENNAGFKSYVATMKVSPIN 118

Query: 360 -GDNDNQNGCEIEWSFVANPMKGWKLED 440
            GD D Q+GC IEWSF+A+P++GW LED
Sbjct: 119 DGDGDGQHGCTIEWSFIADPIEGWPLED 146


>ref|XP_002336388.1| predicted protein [Populus trichocarpa] gi|222834873|gb|EEE73322.1|
           predicted protein [Populus trichocarpa]
          Length = 171

 Score =  162 bits (410), Expect = 3e-38
 Identities = 76/150 (50%), Positives = 102/150 (68%), Gaps = 6/150 (4%)
 Frame = +3

Query: 9   MADDPQQKWQGKVCAKLKGSTADQIWPLFEDYCNIQKWLPIVDSCHHVKGSPDPGQPGCI 188
           M ++ Q KW+GK   +LKG TADQ+WP  ED+CN+QKWLP VD+C+ V+G  + GQPG +
Sbjct: 1   MTEETQGKWEGKATVELKGPTADQVWPFLEDFCNLQKWLPGVDTCYQVEG--ELGQPGLV 58

Query: 189 RYC-AGPATPTNDSSTTTFGWANENLLAIDPMERYLTYEINESNMGFDNYVATIKVLL-- 359
           RYC +G A+           WA E L+ I+P ER L+YEI E+N GF +YVAT+K     
Sbjct: 59  RYCSSGTASSDGSHEGNKVIWAKEKLIMINPSERCLSYEILENNAGFKSYVATMKAFPIN 118

Query: 360 ---GDNDNQNGCEIEWSFVANPMKGWKLED 440
               D D Q+GC+IEWSF+A+P++GW LED
Sbjct: 119 DGDEDGDGQHGCKIEWSFIADPIEGWPLED 148


>ref|XP_002516521.1| hypothetical protein RCOM_0800710 [Ricinus communis]
           gi|223544341|gb|EEF45862.1| hypothetical protein
           RCOM_0800710 [Ricinus communis]
          Length = 343

 Score =  160 bits (405), Expect = 1e-37
 Identities = 69/146 (47%), Positives = 102/146 (69%), Gaps = 1/146 (0%)
 Frame = +3

Query: 6   LMADDPQQKWQGKVCAKLKGSTADQIWPLFEDYCNIQKWLPIVDSCHHVKGSPDPGQPGC 185
           L+ +  ++KW GK   +LKG TADQ+WP   D+CN+ KW P +D+C+ V+G    GQPG 
Sbjct: 175 LLTEISERKWDGKATVELKGLTADQVWPFVADFCNLHKWFPNLDTCYQVEGQL--GQPGL 232

Query: 186 IRYCAGPATPTNDSS-TTTFGWANENLLAIDPMERYLTYEINESNMGFDNYVATIKVLLG 362
           +RYCA    P++D S  TTF W  E L+ I+P ER L+YE+ +S+MGF++Y AT ++L  
Sbjct: 233 VRYCASVPQPSSDGSGETTFSWVKEKLVMINPDERCLSYEVVDSSMGFESYAATFRLLQV 292

Query: 363 DNDNQNGCEIEWSFVANPMKGWKLED 440
           + D Q+GC+IEWSFV++P++ W  +D
Sbjct: 293 NGDAQHGCKIEWSFVSDPVEAWSFQD 318



 Score =  135 bits (341), Expect = 3e-30
 Identities = 68/143 (47%), Positives = 95/143 (66%), Gaps = 4/143 (2%)
 Frame = +3

Query: 24  QQKWQGKVCAKLKGSTADQIWPLFEDYCNIQKWLPIVDSCHHVKGSPDPGQPGCIRYCAG 203
           QQKW+GKV   L  + A+QIWPLF D+ NI KWLP + +C+ + G+   G+ GC+RYCAG
Sbjct: 10  QQKWEGKVSTGLPKAKAEQIWPLFTDFFNIHKWLPTLRTCYGICGT--NGERGCVRYCAG 67

Query: 204 PATP--TNDSS--TTTFGWANENLLAIDPMERYLTYEINESNMGFDNYVATIKVLLGDND 371
            + P    D S       W+ E L+A+D +ER LTYEI +SN+GF +YV+T+K++     
Sbjct: 68  FSIPPEVTDKSHLNHNSSWSKERLVAVDHVERCLTYEIVDSNIGFKSYVSTVKIVPAGVG 127

Query: 372 NQNGCEIEWSFVANPMKGWKLED 440
             NGC IEWSF  +P+KG+ L+D
Sbjct: 128 --NGCVIEWSFQVDPVKGYVLDD 148


>ref|XP_002308595.1| predicted protein [Populus trichocarpa] gi|222854571|gb|EEE92118.1|
           predicted protein [Populus trichocarpa]
          Length = 169

 Score =  160 bits (405), Expect = 1e-37
 Identities = 76/145 (52%), Positives = 98/145 (67%), Gaps = 3/145 (2%)
 Frame = +3

Query: 15  DDPQQKWQGKVCAKLKGSTADQIWPLFEDYCNIQKWLPIVDSCHHVKGSPDPGQPGCIRY 194
           + PQ KW+GK   +LKG TADQIWPL ED+CNI KW P +D C+HV G  + G+PG  RY
Sbjct: 4   ETPQIKWEGKSIVELKGPTADQIWPLLEDFCNINKWFPSIDVCNHVDG--ELGKPGLTRY 61

Query: 195 CAGPATPTNDS-STTTFGWANENLLAIDPMERYLTYEINESNMGFDNYVATIKVL--LGD 365
           CA     T  S       W  E LL I+P E+ L+YE+ E+N GF +YVAT+KVL   G 
Sbjct: 62  CASKTLSTYGSYDEAVVRWVKERLLMINPAEKCLSYEVLENNSGFKSYVATMKVLEINGS 121

Query: 366 NDNQNGCEIEWSFVANPMKGWKLED 440
           +  +NGC+IEWSF+A+P++GW LED
Sbjct: 122 DAGENGCKIEWSFIADPVEGWTLED 146


>gb|ABK96434.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 171

 Score =  158 bits (400), Expect = 4e-37
 Identities = 74/150 (49%), Positives = 102/150 (68%), Gaps = 6/150 (4%)
 Frame = +3

Query: 9   MADDPQQKWQGKVCAKLKGSTADQIWPLFEDYCNIQKWLPIVDSCHHVKGSPDPGQPGCI 188
           M ++ Q KW+GK   +L+G TADQ+WP  ED+CN+QKWLP VD+C+ V+G  + GQPG +
Sbjct: 1   MTEETQAKWEGKATVELRGPTADQVWPCLEDFCNLQKWLPRVDTCYRVEG--ELGQPGLV 58

Query: 189 RYC---AGPATPTNDSSTTTFGWANENLLAIDPMERYLTYEINESNMGFDNYVATIKVLL 359
           R C     P+  +++       WA E L+ I+P ER L+YEI E+N GF +YVAT+KV  
Sbjct: 59  RCCNFSKVPSEGSHEDEENKVIWAKEKLIMINPSERCLSYEILENNAGFKSYVATMKVSP 118

Query: 360 ---GDNDNQNGCEIEWSFVANPMKGWKLED 440
              GD D  +GC IEWSF+A+P++GW LED
Sbjct: 119 INDGDGDGHHGCTIEWSFIADPIEGWPLED 148


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