BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00024743
         (256 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001173953.1| Os04g0436350 [Oryza sativa Japonica Group] g...   104   7e-21
ref|NP_001173399.1| Os03g0317100 [Oryza sativa Japonica Group] g...    99   3e-19
gb|ABF95626.1| pentatricopeptide, putative [Oryza sativa Japonic...    99   3e-19
gb|EAY89771.1| hypothetical protein OsI_11313 [Oryza sativa Indi...    98   8e-19
ref|XP_003581249.1| PREDICTED: pentatricopeptide repeat-containi...    95   5e-18

>ref|NP_001173953.1| Os04g0436350 [Oryza sativa Japonica Group]
           gi|21740490|emb|CAD40814.1| OSJNBa0006B20.5 [Oryza
           sativa Japonica Group] gi|125590470|gb|EAZ30820.1|
           hypothetical protein OsJ_14890 [Oryza sativa Japonica
           Group] gi|218194889|gb|EEC77316.1| hypothetical protein
           OsI_15981 [Oryza sativa Indica Group]
           gi|255675491|dbj|BAH92681.1| Os04g0436350 [Oryza sativa
           Japonica Group]
          Length = 685

 Score =  104 bits (260), Expect = 7e-21
 Identities = 45/83 (54%), Positives = 58/83 (69%)
 Frame = +2

Query: 2   HYGCMVDILGRGGHVEEAWDLVRNMPMKPDAFVLKSLLSGCASYGYLDCAEWAAMKLLEL 181
           HY CM+D+LGR GH++E  +L+ NMPM+PDA +  SLL  C  +  +D  EWAA KL EL
Sbjct: 526 HYTCMIDLLGRAGHLKEVEELIENMPMEPDAVLWASLLGACRLHKNIDMGEWAAGKLFEL 585

Query: 182 DQDSDSPYTLLGNAYASVGRWAD 250
           D D+  PY LL N YA +G+WAD
Sbjct: 586 DPDNSGPYVLLSNMYAELGKWAD 608


>ref|NP_001173399.1| Os03g0317100 [Oryza sativa Japonica Group]
           gi|255674461|dbj|BAH92127.1| Os03g0317100 [Oryza sativa
           Japonica Group]
          Length = 706

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 45/84 (53%), Positives = 60/84 (71%)
 Frame = +2

Query: 2   HYGCMVDILGRGGHVEEAWDLVRNMPMKPDAFVLKSLLSGCASYGYLDCAEWAAMKLLEL 181
           HY CMVD+LGR G VEEA+DL++NMP++PDA +  +L+  C  +   + AE+AA KLLEL
Sbjct: 472 HYSCMVDLLGRSGLVEEAFDLIKNMPVEPDAVIWGALMGACRMHRNAEIAEFAAKKLLEL 531

Query: 182 DQDSDSPYTLLGNAYASVGRWADA 253
           +  +  PY LL + Y SVGRW DA
Sbjct: 532 EPGNAGPYVLLSHIYTSVGRWEDA 555


>gb|ABF95626.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
           gi|125586055|gb|EAZ26719.1| hypothetical protein
           OsJ_10627 [Oryza sativa Japonica Group]
          Length = 798

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 45/84 (53%), Positives = 60/84 (71%)
 Frame = +2

Query: 2   HYGCMVDILGRGGHVEEAWDLVRNMPMKPDAFVLKSLLSGCASYGYLDCAEWAAMKLLEL 181
           HY CMVD+LGR G VEEA+DL++NMP++PDA +  +L+  C  +   + AE+AA KLLEL
Sbjct: 472 HYSCMVDLLGRSGLVEEAFDLIKNMPVEPDAVIWGALMGACRMHRNAEIAEFAAKKLLEL 531

Query: 182 DQDSDSPYTLLGNAYASVGRWADA 253
           +  +  PY LL + Y SVGRW DA
Sbjct: 532 EPGNAGPYVLLSHIYTSVGRWEDA 555


>gb|EAY89771.1| hypothetical protein OsI_11313 [Oryza sativa Indica Group]
          Length = 798

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 45/84 (53%), Positives = 59/84 (70%)
 Frame = +2

Query: 2   HYGCMVDILGRGGHVEEAWDLVRNMPMKPDAFVLKSLLSGCASYGYLDCAEWAAMKLLEL 181
           HY CMVD+LGR G VEEA+DL++NMP++PDA +  +L+  C  +   + AE AA KLLEL
Sbjct: 472 HYSCMVDLLGRSGLVEEAFDLIKNMPVEPDAVIWGALMGACRMHRNAEIAEVAAKKLLEL 531

Query: 182 DQDSDSPYTLLGNAYASVGRWADA 253
           +  +  PY LL + Y SVGRW DA
Sbjct: 532 EPGNAGPYVLLSHIYTSVGRWEDA 555


>ref|XP_003581249.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21300-like
            [Brachypodium distachyon]
          Length = 1430

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 41/83 (49%), Positives = 56/83 (67%)
 Frame = +2

Query: 2    HYGCMVDILGRGGHVEEAWDLVRNMPMKPDAFVLKSLLSGCASYGYLDCAEWAAMKLLEL 181
            HY CM+D+LGR GH++E  +L++ M M+PDA +  SLL  C  +  ++  EWAA KL EL
Sbjct: 1271 HYTCMIDLLGRAGHLKEVEELIKEMSMEPDAVLWASLLGSCRLHKNVEMGEWAAGKLFEL 1330

Query: 182  DQDSDSPYTLLGNAYASVGRWAD 250
            D  +  PY LL N YA +G+WAD
Sbjct: 1331 DPRNSGPYVLLSNMYAELGKWAD 1353