BLASTX nr result

ID: Coptis24_contig00024663 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00024663
         (760 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI25025.3| unnamed protein product [Vitis vinifera]              379   e-103
ref|XP_002269556.1| PREDICTED: high affinity cationic amino acid...   379   e-103
ref|XP_002515785.1| cationic amino acid transporter, putative [R...   378   e-103
ref|XP_002316491.1| cationic amino acid transporter [Populus tri...   377   e-102
ref|XP_003637200.1| High affinity cationic amino acid transporte...   372   e-101

>emb|CBI25025.3| unnamed protein product [Vitis vinifera]
          Length = 536

 Score =  379 bits (972), Expect = e-103
 Identities = 186/254 (73%), Positives = 212/254 (83%), Gaps = 1/254 (0%)
 Frame = +2

Query: 2   DAVSTMAEEVKNPKKDIPXXXXXXXXXXTVLYCLMAASMSLLVPYDMIDTEAPFSAAFRA 181
           DAVST+AEEV+NP KDIP          T+LYCLMAASMS L+PYD ID EAPFSAAFR 
Sbjct: 223 DAVSTLAEEVRNPVKDIPIGVSGSVMLVTILYCLMAASMSKLLPYDAIDPEAPFSAAFRG 282

Query: 182 -ADRWGWVSNVIGVGASFGILTSLLVSLLGQARYLCVIGRSRVAPVWFAKVNPKTTTPVN 358
            ++ W WVSNVIG GASFGILTSL+V++LGQARY+CVIGRS+V P WFA+V+ KT TPVN
Sbjct: 283 QSNGWKWVSNVIGAGASFGILTSLMVAMLGQARYMCVIGRSKVVPSWFARVHHKTCTPVN 342

Query: 359 ASAFLGIFTAAVALFTDLNILLNLVSIGTLFVFYMVANAVIYRRYVSTGITNPWPTLSFL 538
           ASAFLGIFTAA+A+FTDLN+LLNLVSIGTLFVFYMVANAVIYRRYVS G TNPWPTLSFL
Sbjct: 343 ASAFLGIFTAAIAVFTDLNVLLNLVSIGTLFVFYMVANAVIYRRYVSVGATNPWPTLSFL 402

Query: 539 LSFTCTSIIFTLSWQLGPTGTPRILLLVACTAIAFVLLQVFRCAVPQVSKPQSWGVPLMP 718
           +SF+ TSIIFTL W     G P+ ++L ACT +A  +LQ+F C VPQV KP+ WGVPLMP
Sbjct: 403 VSFSLTSIIFTLIWHFAAPGHPKEVMLGACTVVAVAILQMFHCMVPQVRKPEHWGVPLMP 462

Query: 719 WIPSISIFLNVFLL 760
           WIPSISIFLN+FLL
Sbjct: 463 WIPSISIFLNIFLL 476


>ref|XP_002269556.1| PREDICTED: high affinity cationic amino acid transporter 1 [Vitis
            vinifera]
          Length = 586

 Score =  379 bits (972), Expect = e-103
 Identities = 186/254 (73%), Positives = 212/254 (83%), Gaps = 1/254 (0%)
 Frame = +2

Query: 2    DAVSTMAEEVKNPKKDIPXXXXXXXXXXTVLYCLMAASMSLLVPYDMIDTEAPFSAAFRA 181
            DAVST+AEEV+NP KDIP          T+LYCLMAASMS L+PYD ID EAPFSAAFR 
Sbjct: 273  DAVSTLAEEVRNPVKDIPIGVSGSVMLVTILYCLMAASMSKLLPYDAIDPEAPFSAAFRG 332

Query: 182  -ADRWGWVSNVIGVGASFGILTSLLVSLLGQARYLCVIGRSRVAPVWFAKVNPKTTTPVN 358
             ++ W WVSNVIG GASFGILTSL+V++LGQARY+CVIGRS+V P WFA+V+ KT TPVN
Sbjct: 333  QSNGWKWVSNVIGAGASFGILTSLMVAMLGQARYMCVIGRSKVVPSWFARVHHKTCTPVN 392

Query: 359  ASAFLGIFTAAVALFTDLNILLNLVSIGTLFVFYMVANAVIYRRYVSTGITNPWPTLSFL 538
            ASAFLGIFTAA+A+FTDLN+LLNLVSIGTLFVFYMVANAVIYRRYVS G TNPWPTLSFL
Sbjct: 393  ASAFLGIFTAAIAVFTDLNVLLNLVSIGTLFVFYMVANAVIYRRYVSVGATNPWPTLSFL 452

Query: 539  LSFTCTSIIFTLSWQLGPTGTPRILLLVACTAIAFVLLQVFRCAVPQVSKPQSWGVPLMP 718
            +SF+ TSIIFTL W     G P+ ++L ACT +A  +LQ+F C VPQV KP+ WGVPLMP
Sbjct: 453  VSFSLTSIIFTLIWHFAAPGHPKEVMLGACTVVAVAILQMFHCMVPQVRKPEHWGVPLMP 512

Query: 719  WIPSISIFLNVFLL 760
            WIPSISIFLN+FLL
Sbjct: 513  WIPSISIFLNIFLL 526


>ref|XP_002515785.1| cationic amino acid transporter, putative [Ricinus communis]
            gi|223545113|gb|EEF46624.1| cationic amino acid
            transporter, putative [Ricinus communis]
          Length = 576

 Score =  378 bits (970), Expect = e-103
 Identities = 184/254 (72%), Positives = 209/254 (82%), Gaps = 1/254 (0%)
 Frame = +2

Query: 2    DAVSTMAEEVKNPKKDIPXXXXXXXXXXTVLYCLMAASMSLLVPYDMIDTEAPFSAAFRA 181
            DAVST+AEEV NP  DIP          TVLYCLMAASMS+L+PYD+ID EAPFSAAF+ 
Sbjct: 262  DAVSTLAEEVHNPVNDIPIGVSGSVALVTVLYCLMAASMSMLLPYDLIDAEAPFSAAFKG 321

Query: 182  -ADRWGWVSNVIGVGASFGILTSLLVSLLGQARYLCVIGRSRVAPVWFAKVNPKTTTPVN 358
             +D W WVSNVIGVGASFGILTSLLVS+LGQARY+CVIGRS V P WFA+V+P+T+TPVN
Sbjct: 322  KSDGWEWVSNVIGVGASFGILTSLLVSMLGQARYMCVIGRSSVVPAWFARVHPRTSTPVN 381

Query: 359  ASAFLGIFTAAVALFTDLNILLNLVSIGTLFVFYMVANAVIYRRYVSTGITNPWPTLSFL 538
            ASAFLGIFTAA+ALFTDLN+LLNLVSIGTLFVFYMVANAVIYRRYV+ G T PWPTLSFL
Sbjct: 382  ASAFLGIFTAAIALFTDLNVLLNLVSIGTLFVFYMVANAVIYRRYVAIGTTKPWPTLSFL 441

Query: 539  LSFTCTSIIFTLSWQLGPTGTPRILLLVACTAIAFVLLQVFRCAVPQVSKPQSWGVPLMP 718
             SF+ TS++FTL W   P G P+  +L ACT  A  ++QVF C VPQ  KP+ WGVPLMP
Sbjct: 442  CSFSFTSLLFTLIWHFMPQGKPKAFMLGACTMTAIAIIQVFNCMVPQARKPEFWGVPLMP 501

Query: 719  WIPSISIFLNVFLL 760
            WIP +SIFLN+FLL
Sbjct: 502  WIPCVSIFLNIFLL 515


>ref|XP_002316491.1| cationic amino acid transporter [Populus trichocarpa]
            gi|222865531|gb|EEF02662.1| cationic amino acid
            transporter [Populus trichocarpa]
          Length = 600

 Score =  377 bits (969), Expect = e-102
 Identities = 182/254 (71%), Positives = 210/254 (82%), Gaps = 1/254 (0%)
 Frame = +2

Query: 2    DAVSTMAEEVKNPKKDIPXXXXXXXXXXTVLYCLMAASMSLLVPYDMIDTEAPFSAAFRA 181
            DAVST+AEEV NP KDIP          TVLYCLM+ASMS+L+PYDMID +APFSAAFR 
Sbjct: 286  DAVSTLAEEVHNPVKDIPIGVSGSVIIVTVLYCLMSASMSMLLPYDMIDADAPFSAAFRG 345

Query: 182  -ADRWGWVSNVIGVGASFGILTSLLVSLLGQARYLCVIGRSRVAPVWFAKVNPKTTTPVN 358
             +D W WVSNVIG+GASFGILTSLLV++LGQARY+CVIGRS V P WFA+V+PKT+TPVN
Sbjct: 346  KSDGWKWVSNVIGIGASFGILTSLLVAMLGQARYMCVIGRSNVVPAWFARVHPKTSTPVN 405

Query: 359  ASAFLGIFTAAVALFTDLNILLNLVSIGTLFVFYMVANAVIYRRYVSTGITNPWPTLSFL 538
            ASAFLGIFTAA+ALFTDLN+LLNLVSIGTLFVFYMVANAV+YRRYV+ G TNPWPTL+FL
Sbjct: 406  ASAFLGIFTAAIALFTDLNVLLNLVSIGTLFVFYMVANAVVYRRYVAIGTTNPWPTLAFL 465

Query: 539  LSFTCTSIIFTLSWQLGPTGTPRILLLVACTAIAFVLLQVFRCAVPQVSKPQSWGVPLMP 718
             SF+ TSI+FTL W   P G  +  +L AC  IA  ++Q+F C VPQ  KP+ WGVPLMP
Sbjct: 466  CSFSLTSILFTLIWHFMPQGKGKAFMLGACAVIAIAIIQLFHCLVPQARKPEFWGVPLMP 525

Query: 719  WIPSISIFLNVFLL 760
            WIP +SIFLN+FLL
Sbjct: 526  WIPCVSIFLNIFLL 539


>ref|XP_003637200.1| High affinity cationic amino acid transporter [Medicago truncatula]
            gi|355503135|gb|AES84338.1| High affinity cationic amino
            acid transporter [Medicago truncatula]
          Length = 623

 Score =  372 bits (956), Expect = e-101
 Identities = 183/253 (72%), Positives = 211/253 (83%)
 Frame = +2

Query: 2    DAVSTMAEEVKNPKKDIPXXXXXXXXXXTVLYCLMAASMSLLVPYDMIDTEAPFSAAFRA 181
            DAVSTMAEEVK P KDIP          T+LYCLMAASM +L+PYDMID EAPFSAAF++
Sbjct: 312  DAVSTMAEEVKEPVKDIPIGVSGSVIIVTILYCLMAASMCMLLPYDMIDPEAPFSAAFKS 371

Query: 182  ADRWGWVSNVIGVGASFGILTSLLVSLLGQARYLCVIGRSRVAPVWFAKVNPKTTTPVNA 361
             D WGW S VIGVGASFGILTSL+V++LGQARY+CVIGRS V P WFAKV+PKT+TPVNA
Sbjct: 372  -DGWGWASRVIGVGASFGILTSLIVAMLGQARYMCVIGRSNVVPAWFAKVHPKTSTPVNA 430

Query: 362  SAFLGIFTAAVALFTDLNILLNLVSIGTLFVFYMVANAVIYRRYVSTGITNPWPTLSFLL 541
            SAFLGIFTAA+ALFTDL++LL+LVSIGTLFVFYMVANAV+YRRYV  G TNPWPT+SFLL
Sbjct: 431  SAFLGIFTAAIALFTDLDVLLDLVSIGTLFVFYMVANAVVYRRYVVAGTTNPWPTVSFLL 490

Query: 542  SFTCTSIIFTLSWQLGPTGTPRILLLVACTAIAFVLLQVFRCAVPQVSKPQSWGVPLMPW 721
            SF+ TSI+FTL W+  PTG  +  +L AC  +A V+LQ+F   VPQ  KP+ WGVPLMPW
Sbjct: 491  SFSFTSIMFTLIWKCVPTGVAKAGMLSACGVLAVVILQLFHFTVPQARKPEFWGVPLMPW 550

Query: 722  IPSISIFLNVFLL 760
            IP+ISIFLN+FLL
Sbjct: 551  IPAISIFLNLFLL 563


Top