BLASTX nr result

ID: Coptis24_contig00024658 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00024658
         (528 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI30455.3| unnamed protein product [Vitis vinifera]              264   5e-69
ref|XP_002276415.1| PREDICTED: laccase-7 [Vitis vinifera]             264   5e-69
ref|XP_002527888.1| laccase, putative [Ricinus communis] gi|2235...   252   3e-65
ref|NP_001233816.1| laccase precursor [Solanum lycopersicum] gi|...   252   3e-65
ref|XP_003516921.1| PREDICTED: laccase-7-like [Glycine max]           244   6e-63

>emb|CBI30455.3| unnamed protein product [Vitis vinifera]
          Length = 542

 Score =  264 bits (675), Expect = 5e-69
 Identities = 119/176 (67%), Positives = 144/176 (81%), Gaps = 1/176 (0%)
 Frame = +1

Query: 1   VGNFPIQRLCQEYVKTAVNAGSLPGPTIEVREGDSLVIHVFNESPFNITLHWHGVFQRLS 180
           V N  ++RLC E V TAVN GSLPGPTI VREGD+LV+HVFN+SP+N+T+HWHGVFQ LS
Sbjct: 31  VQNLTVRRLCHEQVITAVN-GSLPGPTIRVREGDTLVVHVFNKSPYNLTIHWHGVFQLLS 89

Query: 181 GWADGPAYVTQCPILPGNSYTYRFAITGQEGTLWWHAHAHISMLRSTLHGAIIVRPKL-R 357
           GWADGP Y TQC I PG+SYTY+F ITGQEGTLWW  HAH+  LR+T++GA+I+RP+   
Sbjct: 90  GWADGPVYATQCAIRPGHSYTYKFTITGQEGTLWW--HAHVQWLRATVYGALIIRPRAGH 147

Query: 358 GYPFKIPYMEIPLVLGEWWNENIVDVENNFLKSGGGPSLSNAYTINGQPGHLYPCS 525
            YPF  P+ E P++LGEWWN N++DVEN  L SGG P++S+AYTINGQPG LYPCS
Sbjct: 148 KYPFPKPHKEYPIILGEWWNANVIDVENEGLASGGAPNISDAYTINGQPGDLYPCS 203


>ref|XP_002276415.1| PREDICTED: laccase-7 [Vitis vinifera]
          Length = 565

 Score =  264 bits (675), Expect = 5e-69
 Identities = 119/176 (67%), Positives = 144/176 (81%), Gaps = 1/176 (0%)
 Frame = +1

Query: 1   VGNFPIQRLCQEYVKTAVNAGSLPGPTIEVREGDSLVIHVFNESPFNITLHWHGVFQRLS 180
           V N  ++RLC E V TAVN GSLPGPTI VREGD+LV+HVFN+SP+N+T+HWHGVFQ LS
Sbjct: 31  VQNLTVRRLCHEQVITAVN-GSLPGPTIRVREGDTLVVHVFNKSPYNLTIHWHGVFQLLS 89

Query: 181 GWADGPAYVTQCPILPGNSYTYRFAITGQEGTLWWHAHAHISMLRSTLHGAIIVRPKL-R 357
           GWADGP Y TQC I PG+SYTY+F ITGQEGTLWW  HAH+  LR+T++GA+I+RP+   
Sbjct: 90  GWADGPVYATQCAIRPGHSYTYKFTITGQEGTLWW--HAHVQWLRATVYGALIIRPRAGH 147

Query: 358 GYPFKIPYMEIPLVLGEWWNENIVDVENNFLKSGGGPSLSNAYTINGQPGHLYPCS 525
            YPF  P+ E P++LGEWWN N++DVEN  L SGG P++S+AYTINGQPG LYPCS
Sbjct: 148 KYPFPKPHKEYPIILGEWWNANVIDVENEGLASGGAPNISDAYTINGQPGDLYPCS 203


>ref|XP_002527888.1| laccase, putative [Ricinus communis] gi|223532739|gb|EEF34519.1|
           laccase, putative [Ricinus communis]
          Length = 540

 Score =  252 bits (643), Expect = 3e-65
 Identities = 113/176 (64%), Positives = 143/176 (81%), Gaps = 1/176 (0%)
 Frame = +1

Query: 1   VGNFPIQRLCQEYVKTAVNAGSLPGPTIEVREGDSLVIHVFNESPFNITLHWHGVFQRLS 180
           V N  ++RLC E+V TAVN GSLPGPT+ VREGD+L++HVFN+SP+NIT+HWHG+FQ+LS
Sbjct: 4   VKNLTVRRLCNEHVITAVN-GSLPGPTLRVREGDTLIVHVFNKSPYNITIHWHGIFQKLS 62

Query: 181 GWADGPAYVTQCPILPGNSYTYRFAITGQEGTLWWHAHAHISMLRSTLHGAIIVRPKL-R 357
           GWADGP  VTQCPI+PG+SYTY+F +  QEGTLWW  HAH+S LR+T++GA+I+RP+   
Sbjct: 63  GWADGPDMVTQCPIIPGSSYTYKFRVIKQEGTLWW--HAHVSTLRATVYGALIIRPRSGL 120

Query: 358 GYPFKIPYMEIPLVLGEWWNENIVDVENNFLKSGGGPSLSNAYTINGQPGHLYPCS 525
            YPF  P  E+P++LGEWWN N++DVEN  + SGG P  S+AYTING PG LY CS
Sbjct: 121 PYPFPKPDREVPILLGEWWNANVIDVENAAIASGGAPQNSDAYTINGLPGDLYNCS 176


>ref|NP_001233816.1| laccase precursor [Solanum lycopersicum]
           gi|170177495|gb|ACB10229.1| laccase [Solanum
           lycopersicum]
          Length = 572

 Score =  252 bits (643), Expect = 3e-65
 Identities = 117/176 (66%), Positives = 139/176 (78%), Gaps = 1/176 (0%)
 Frame = +1

Query: 1   VGNFPIQRLCQEYVKTAVNAGSLPGPTIEVREGDSLVIHVFNESPFNITLHWHGVFQRLS 180
           V N  I RLC+  V TAVN GSLPGP I V EGD+LV+HV+N SP+N+T+HWHGVFQ LS
Sbjct: 35  VQNRTITRLCRRQVITAVN-GSLPGPAIRVNEGDTLVVHVYNLSPYNLTIHWHGVFQLLS 93

Query: 181 GWADGPAYVTQCPILPGNSYTYRFAITGQEGTLWWHAHAHISMLRSTLHGAIIVRPKL-R 357
           GWADGP + TQCPI PG+SYTY+F ITGQEGTLWW  HAH+S LR+T+HGA+I+RPK   
Sbjct: 94  GWADGPEFATQCPIRPGHSYTYKFRITGQEGTLWW--HAHVSWLRATVHGALIIRPKKGH 151

Query: 358 GYPFKIPYMEIPLVLGEWWNENIVDVENNFLKSGGGPSLSNAYTINGQPGHLYPCS 525
            YPF  P  E+P++LGEWWN N+VDVEN  L +G  P+ S+AYTING PG LYPCS
Sbjct: 152 SYPFPKPCREVPILLGEWWNANVVDVENAALATGSAPNNSDAYTINGWPGDLYPCS 207


>ref|XP_003516921.1| PREDICTED: laccase-7-like [Glycine max]
          Length = 567

 Score =  244 bits (623), Expect = 6e-63
 Identities = 112/176 (63%), Positives = 137/176 (77%), Gaps = 1/176 (0%)
 Frame = +1

Query: 1   VGNFPIQRLCQEYVKTAVNAGSLPGPTIEVREGDSLVIHVFNESPFNITLHWHGVFQRLS 180
           +GN  + RLC E V T VN GSLPGPTI V EGD+LV+H  N SP+NITLHWHG+FQ L+
Sbjct: 32  IGNLTVSRLCNEEVITTVN-GSLPGPTIYVEEGDTLVVHANNNSPYNITLHWHGIFQILT 90

Query: 181 GWADGPAYVTQCPILPGNSYTYRFAITGQEGTLWWHAHAHISMLRSTLHGAIIVRPKL-R 357
            WADGP  VTQCPI PG  YTYRF ITGQEGTLWWH+H+  S LR+T++GA+I+RP+   
Sbjct: 91  AWADGPESVTQCPIRPGGKYTYRFNITGQEGTLWWHSHS--SFLRATVYGALIIRPRRGN 148

Query: 358 GYPFKIPYMEIPLVLGEWWNENIVDVENNFLKSGGGPSLSNAYTINGQPGHLYPCS 525
            +PF   Y E+P++LGEWWN N+VDVENN +++G GP+LS+AYTING PG  Y CS
Sbjct: 149 SHPFPSVYQEVPILLGEWWNGNVVDVENNAIETGIGPNLSDAYTINGLPGDTYNCS 204


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