BLASTX nr result

ID: Coptis24_contig00024588 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00024588
         (652 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267834.1| PREDICTED: uncharacterized protein LOC100266...    71   2e-10
ref|XP_002517630.1| conserved hypothetical protein [Ricinus comm...    70   3e-10
ref|XP_004135861.1| PREDICTED: uncharacterized protein LOC101209...    66   5e-09
ref|XP_003604386.1| hypothetical protein MTR_4g010270 [Medicago ...    66   5e-09
ref|XP_003531713.1| PREDICTED: uncharacterized protein LOC100788...    65   1e-08

>ref|XP_002267834.1| PREDICTED: uncharacterized protein LOC100266397 [Vitis vinifera]
           gi|297743452|emb|CBI36319.3| unnamed protein product
           [Vitis vinifera]
          Length = 137

 Score = 71.2 bits (173), Expect = 2e-10
 Identities = 35/52 (67%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
 Frame = +1

Query: 322 VTTSSLGETFSKFQDKTQIFFAVLFWMSLFFWNCAWDGRNDG-PNKKSRSGR 474
           V  + L  TFS+FQD  QIFFAVLFW+SLFFW  AWDGRN G PNK SR  R
Sbjct: 86  VPLTGLVATFSRFQDSIQIFFAVLFWLSLFFWASAWDGRNGGRPNKGSRLRR 137


>ref|XP_002517630.1| conserved hypothetical protein [Ricinus communis]
           gi|223543262|gb|EEF44794.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 123

 Score = 70.5 bits (171), Expect = 3e-10
 Identities = 33/49 (67%), Positives = 37/49 (75%), Gaps = 3/49 (6%)
 Frame = +1

Query: 337 LGETFSKFQDKTQIFFAVLFWMSLFFWNCAWDGRNDG---PNKKSRSGR 474
           +  TF++FQD+ QIFFAVLFWMSLFFW  AWDGRN G   PNK SR  R
Sbjct: 75  IAATFTRFQDRVQIFFAVLFWMSLFFWASAWDGRNRGGSRPNKGSRFRR 123


>ref|XP_004135861.1| PREDICTED: uncharacterized protein LOC101209839 [Cucumis sativus]
           gi|449491039|ref|XP_004158781.1| PREDICTED:
           uncharacterized LOC101209839 [Cucumis sativus]
          Length = 127

 Score = 66.2 bits (160), Expect = 5e-09
 Identities = 54/131 (41%), Positives = 64/131 (48%), Gaps = 10/131 (7%)
 Frame = +1

Query: 112 ILNTTDALHSTSSSIFICPRPLINLSSTIHL--------HQRSFPG--FSSKLSNSSAIC 261
           IL+T+  LH +S S+      L  L ST HL        H+R      FSS     S +C
Sbjct: 3   ILSTS--LHRSSQSVAASSIAL-PLCSTFHLRSEICFSLHRRRLSPLFFSSNSYAESVVC 59

Query: 262 FATNXXXXXXXXXXXXEKHFVTTSSLGETFSKFQDKTQIFFAVLFWMSLFFWNCAWDGRN 441
            A              E+  V  + L   FSKF+D+ QIF AVLFWMSLFFW  A DGRN
Sbjct: 60  SAA--VRPPPDSDPPPEEDPVRLTGLPAIFSKFRDRVQIFLAVLFWMSLFFWTSALDGRN 117

Query: 442 DGPNKKSRSGR 474
             PNK SR  R
Sbjct: 118 -RPNKGSRFRR 127


>ref|XP_003604386.1| hypothetical protein MTR_4g010270 [Medicago truncatula]
           gi|355505441|gb|AES86583.1| hypothetical protein
           MTR_4g010270 [Medicago truncatula]
          Length = 124

 Score = 66.2 bits (160), Expect = 5e-09
 Identities = 39/100 (39%), Positives = 51/100 (51%)
 Frame = +1

Query: 166 PRPLINLSSTIHLHQRSFPGFSSKLSNSSAICFATNXXXXXXXXXXXXEKHFVTTSSLGE 345
           P P  + SS++ L   S   F    S+S+++                 E        +  
Sbjct: 23  PSPSPSPSSSLSLSTSSNRSFQPLSSSSTSLRRLRCRAASPNPPPPPPENESTELQGVVA 82

Query: 346 TFSKFQDKTQIFFAVLFWMSLFFWNCAWDGRNDGPNKKSR 465
           + SKFQD+ QIFFAVLFWM+LFFW  AWDGRN  PNK S+
Sbjct: 83  SLSKFQDRVQIFFAVLFWMTLFFWASAWDGRN-RPNKGSK 121


>ref|XP_003531713.1| PREDICTED: uncharacterized protein LOC100788011 [Glycine max]
          Length = 119

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 42/106 (39%), Positives = 53/106 (50%), Gaps = 6/106 (5%)
 Frame = +1

Query: 175 LINLSSTIHLHQRSFPGFSSKLSNSSAI------CFATNXXXXXXXXXXXXEKHFVTTSS 336
           L+   S  H    S       LS+SSA+      C A +             +H +  + 
Sbjct: 16  LLRTLSRSHAFSFSLHRQFQPLSSSSAVLRRLPRCHAASPGPPLPPSENDSSRH-LKGAD 74

Query: 337 LGETFSKFQDKTQIFFAVLFWMSLFFWNCAWDGRNDGPNKKSRSGR 474
           +  + SK QD+ QIFFAVLFWMSLFFW  AWDGRN  P+K SR  R
Sbjct: 75  VATSLSKIQDRIQIFFAVLFWMSLFFWASAWDGRN-RPDKGSRFRR 119


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