BLASTX nr result
ID: Coptis24_contig00024506
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00024506 (550 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003635039.1| PREDICTED: uncharacterized protein LOC100855... 92 7e-17 ref|XP_002269970.1| PREDICTED: uncharacterized protein LOC100254... 90 3e-16 ref|XP_002522759.1| conserved hypothetical protein [Ricinus comm... 84 1e-14 gb|ABK93642.1| unknown [Populus trichocarpa] gi|118483908|gb|ABK... 84 1e-14 ref|XP_002522892.1| conserved hypothetical protein [Ricinus comm... 83 3e-14 >ref|XP_003635039.1| PREDICTED: uncharacterized protein LOC100855374 [Vitis vinifera] Length = 90 Score = 91.7 bits (226), Expect = 7e-17 Identities = 43/84 (51%), Positives = 58/84 (69%) Frame = -1 Query: 424 TMAVPEKLMKYKFHFMXXXXXXXXXXXXXXIAPRFLTILSYFWPLFMSTALFLFAVLFFG 245 TM + KLM+Y++HF+ +APRFLTIL+YFWPLF+STA+ L ++ FG Sbjct: 4 TMEIQTKLMQYQYHFIITVVVSIILALLFQVAPRFLTILAYFWPLFVSTAVLLMVMIVFG 63 Query: 244 RISPLVSEISSDKPGEGLLDYVAG 173 ++SP +EI +K GEGLLDYVAG Sbjct: 64 QLSPPSTEIHGEKTGEGLLDYVAG 87 >ref|XP_002269970.1| PREDICTED: uncharacterized protein LOC100254592 [Vitis vinifera] gi|297736712|emb|CBI25748.3| unnamed protein product [Vitis vinifera] Length = 86 Score = 89.7 bits (221), Expect = 3e-16 Identities = 42/83 (50%), Positives = 57/83 (68%) Frame = -1 Query: 421 MAVPEKLMKYKFHFMXXXXXXXXXXXXXXIAPRFLTILSYFWPLFMSTALFLFAVLFFGR 242 M + KLM+Y++HF+ +APRFLTIL+YFWPLF+STA+ L ++ FG+ Sbjct: 1 MEIQTKLMQYQYHFIITVVVSIILALLFQVAPRFLTILAYFWPLFVSTAVLLMVMIVFGQ 60 Query: 241 ISPLVSEISSDKPGEGLLDYVAG 173 +SP +EI +K GEGLLDYVAG Sbjct: 61 LSPPSTEIHGEKTGEGLLDYVAG 83 >ref|XP_002522759.1| conserved hypothetical protein [Ricinus communis] gi|223537997|gb|EEF39610.1| conserved hypothetical protein [Ricinus communis] Length = 97 Score = 84.3 bits (207), Expect = 1e-14 Identities = 44/83 (53%), Positives = 56/83 (67%) Frame = -1 Query: 421 MAVPEKLMKYKFHFMXXXXXXXXXXXXXXIAPRFLTILSYFWPLFMSTALFLFAVLFFGR 242 M + E +MKYK+ + +AP F+TIL+YFWPLF+STALFL AV+FFG+ Sbjct: 1 MEIQEMVMKYKY-LIIFTFTVCILGAVIYVAPSFMTILAYFWPLFLSTALFLAAVVFFGK 59 Query: 241 ISPLVSEISSDKPGEGLLDYVAG 173 S +E+S DK GEGLLDYVAG Sbjct: 60 TSLPGTELSGDKAGEGLLDYVAG 82 >gb|ABK93642.1| unknown [Populus trichocarpa] gi|118483908|gb|ABK93844.1| unknown [Populus trichocarpa] Length = 95 Score = 84.3 bits (207), Expect = 1e-14 Identities = 44/83 (53%), Positives = 54/83 (65%) Frame = -1 Query: 421 MAVPEKLMKYKFHFMXXXXXXXXXXXXXXIAPRFLTILSYFWPLFMSTALFLFAVLFFGR 242 M + EKL+ YK+H +AP FLTIL+YF PL +STALFL AV+FFG+ Sbjct: 1 MEIKEKLLNYKYHIFFTLVFSLILVSIIVVAPSFLTILAYFCPLLLSTALFLGAVIFFGK 60 Query: 241 ISPLVSEISSDKPGEGLLDYVAG 173 S ++ SSDK GEGLLDYVAG Sbjct: 61 TSLPGTDSSSDKAGEGLLDYVAG 83 >ref|XP_002522892.1| conserved hypothetical protein [Ricinus communis] gi|223537877|gb|EEF39492.1| conserved hypothetical protein [Ricinus communis] Length = 97 Score = 82.8 bits (203), Expect = 3e-14 Identities = 38/83 (45%), Positives = 51/83 (61%) Frame = -1 Query: 421 MAVPEKLMKYKFHFMXXXXXXXXXXXXXXIAPRFLTILSYFWPLFMSTALFLFAVLFFGR 242 M +PEK+++Y++HF APRFLTIL+YFWPLF ST +FL ++ FG Sbjct: 1 MDIPEKILQYRYHFGIAIIASLVLSILLYAAPRFLTILAYFWPLFASTTVFLVLIIAFGG 60 Query: 241 ISPLVSEISSDKPGEGLLDYVAG 173 +S S + D+ GEGLL YV G Sbjct: 61 VSQFPSNVHGDQAGEGLLGYVEG 83