BLASTX nr result

ID: Coptis24_contig00024506 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00024506
         (550 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635039.1| PREDICTED: uncharacterized protein LOC100855...    92   7e-17
ref|XP_002269970.1| PREDICTED: uncharacterized protein LOC100254...    90   3e-16
ref|XP_002522759.1| conserved hypothetical protein [Ricinus comm...    84   1e-14
gb|ABK93642.1| unknown [Populus trichocarpa] gi|118483908|gb|ABK...    84   1e-14
ref|XP_002522892.1| conserved hypothetical protein [Ricinus comm...    83   3e-14

>ref|XP_003635039.1| PREDICTED: uncharacterized protein LOC100855374 [Vitis vinifera]
          Length = 90

 Score = 91.7 bits (226), Expect = 7e-17
 Identities = 43/84 (51%), Positives = 58/84 (69%)
 Frame = -1

Query: 424 TMAVPEKLMKYKFHFMXXXXXXXXXXXXXXIAPRFLTILSYFWPLFMSTALFLFAVLFFG 245
           TM +  KLM+Y++HF+              +APRFLTIL+YFWPLF+STA+ L  ++ FG
Sbjct: 4   TMEIQTKLMQYQYHFIITVVVSIILALLFQVAPRFLTILAYFWPLFVSTAVLLMVMIVFG 63

Query: 244 RISPLVSEISSDKPGEGLLDYVAG 173
           ++SP  +EI  +K GEGLLDYVAG
Sbjct: 64  QLSPPSTEIHGEKTGEGLLDYVAG 87


>ref|XP_002269970.1| PREDICTED: uncharacterized protein LOC100254592 [Vitis vinifera]
           gi|297736712|emb|CBI25748.3| unnamed protein product
           [Vitis vinifera]
          Length = 86

 Score = 89.7 bits (221), Expect = 3e-16
 Identities = 42/83 (50%), Positives = 57/83 (68%)
 Frame = -1

Query: 421 MAVPEKLMKYKFHFMXXXXXXXXXXXXXXIAPRFLTILSYFWPLFMSTALFLFAVLFFGR 242
           M +  KLM+Y++HF+              +APRFLTIL+YFWPLF+STA+ L  ++ FG+
Sbjct: 1   MEIQTKLMQYQYHFIITVVVSIILALLFQVAPRFLTILAYFWPLFVSTAVLLMVMIVFGQ 60

Query: 241 ISPLVSEISSDKPGEGLLDYVAG 173
           +SP  +EI  +K GEGLLDYVAG
Sbjct: 61  LSPPSTEIHGEKTGEGLLDYVAG 83


>ref|XP_002522759.1| conserved hypothetical protein [Ricinus communis]
           gi|223537997|gb|EEF39610.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 97

 Score = 84.3 bits (207), Expect = 1e-14
 Identities = 44/83 (53%), Positives = 56/83 (67%)
 Frame = -1

Query: 421 MAVPEKLMKYKFHFMXXXXXXXXXXXXXXIAPRFLTILSYFWPLFMSTALFLFAVLFFGR 242
           M + E +MKYK+  +              +AP F+TIL+YFWPLF+STALFL AV+FFG+
Sbjct: 1   MEIQEMVMKYKY-LIIFTFTVCILGAVIYVAPSFMTILAYFWPLFLSTALFLAAVVFFGK 59

Query: 241 ISPLVSEISSDKPGEGLLDYVAG 173
            S   +E+S DK GEGLLDYVAG
Sbjct: 60  TSLPGTELSGDKAGEGLLDYVAG 82


>gb|ABK93642.1| unknown [Populus trichocarpa] gi|118483908|gb|ABK93844.1| unknown
           [Populus trichocarpa]
          Length = 95

 Score = 84.3 bits (207), Expect = 1e-14
 Identities = 44/83 (53%), Positives = 54/83 (65%)
 Frame = -1

Query: 421 MAVPEKLMKYKFHFMXXXXXXXXXXXXXXIAPRFLTILSYFWPLFMSTALFLFAVLFFGR 242
           M + EKL+ YK+H                +AP FLTIL+YF PL +STALFL AV+FFG+
Sbjct: 1   MEIKEKLLNYKYHIFFTLVFSLILVSIIVVAPSFLTILAYFCPLLLSTALFLGAVIFFGK 60

Query: 241 ISPLVSEISSDKPGEGLLDYVAG 173
            S   ++ SSDK GEGLLDYVAG
Sbjct: 61  TSLPGTDSSSDKAGEGLLDYVAG 83


>ref|XP_002522892.1| conserved hypothetical protein [Ricinus communis]
           gi|223537877|gb|EEF39492.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 97

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 38/83 (45%), Positives = 51/83 (61%)
 Frame = -1

Query: 421 MAVPEKLMKYKFHFMXXXXXXXXXXXXXXIAPRFLTILSYFWPLFMSTALFLFAVLFFGR 242
           M +PEK+++Y++HF                APRFLTIL+YFWPLF ST +FL  ++ FG 
Sbjct: 1   MDIPEKILQYRYHFGIAIIASLVLSILLYAAPRFLTILAYFWPLFASTTVFLVLIIAFGG 60

Query: 241 ISPLVSEISSDKPGEGLLDYVAG 173
           +S   S +  D+ GEGLL YV G
Sbjct: 61  VSQFPSNVHGDQAGEGLLGYVEG 83


Top